Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 5.6e-147 524.2 262 100.0
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 1.3e-95 353.6 263 71.5
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 1.1e-94 350.5 269 71.7
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 3.2e-94 349.0 273 72.2
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 3.2e-94 349.0 265 71.7
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 5.5e-94 348.2 266 71.1
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 9.4e-94 347.4 267 71.2
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 4.6e-93 345.1 263 69.6
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 4.6e-93 345.1 267 70.4
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 6.1e-93 344.7 281 68.7
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 6.7e-92 341.3 266 70.7
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 1.5e-91 340.1 264 71.2
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 2.0e-91 339.7 201 83.6
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 2.2e-90 336.3 216 78.2
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 4.8e-90 335.1 264 68.9
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 6.3e-90 334.7 261 68.2
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 8.2e-90 334.3 179 91.6
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 2.4e-89 332.8 267 68.2
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 4.1e-89 332.0 265 69.1
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 1.2e-88 330.5 276 66.7
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 1.5e-88 330.1 269 67.3
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 3.4e-88 328.9 266 66.9
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 3.4e-88 328.9 266 66.9
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 3.4e-88 328.9 271 68.6
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 7.7e-88 327.8 268 66.8
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 7.7e-88 327.8 263 70.0
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 1.0e-87 327.4 197 82.7
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 1.3e-87 327.0 266 67.3
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 2.2e-87 326.2 229 74.7
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 2.2e-87 326.2 206 80.1
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 2.9e-87 325.9 263 66.5
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 3.8e-87 325.5 181 87.3
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 3.8e-87 325.5 222 75.2
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 8.5e-87 324.3 233 73.8
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 8.5e-87 324.3 216 77.8
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 1.9e-86 323.2 278 64.4
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 1.2e-85 320.5 270 65.2
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 1.6e-85 320.1 237 70.5
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 2.7e-85 319.3 299 62.5
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 6.1e-85 318.2 269 65.4
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 6.1e-85 318.2 231 72.3
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 7.9e-85 317.8 264 65.5
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 1.4e-84 317.0 258 66.3
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 2.3e-84 316.2 197 82.2
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 2.3e-84 316.2 205 77.6
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 3.9e-84 315.5 257 65.8
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 6.7e-84 314.7 265 64.9
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 1.5e-83 313.5 207 74.9
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 2.0e-83 313.2 225 73.8
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 2.0e-83 313.2 264 64.0
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 2.6e-83 312.8 220 72.3
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 2.6e-83 312.8 240 70.4
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 3.3e-83 312.4 181 85.1
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 3.3e-83 312.4 287 62.4
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 4.4e-83 312.0 262 65.3
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 7.4e-83 311.2 264 63.6
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 7.4e-83 311.2 262 64.5
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 1.7e-82 310.1 261 64.8
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 2.8e-82 309.3 193 77.7
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 4.8e-82 308.5 179 82.7
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 5.3e-81 305.1 235 68.5
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 1.2e-80 303.9 216 73.1
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 4.5e-80 302.0 253 65.6
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 4.5e-80 302.0 275 61.5
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 7.7e-80 301.2 227 67.8
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 1.0e-79 300.8 252 65.5
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 1.7e-79 300.1 251 65.7
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 2.2e-79 299.7 225 69.8
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 3.8e-79 298.9 228 71.5
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 5.0e-79 298.5 273 62.3
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 6.5e-79 298.1 179 81.0
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 1.6e-77 293.5 243 67.1
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 1.6e-77 293.5 178 80.3
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 2.7e-77 292.7 207 72.9
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 6.1e-77 291.6 257 62.3
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 8.2e-74 281.2 211 70.1
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 5.3e-73 278.5 214 70.1
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 2.0e-72 276.6 194 69.1
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 2.6e-72 276.2 230 65.7
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 1.5e-70 270.4 238 62.2
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 5.5e-70 268.5 229 62.9
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 3.0e-68 262.7 198 69.7
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 8.8e-68 261.2 256 58.2
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 1.7e-66 256.9 279 54.1
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 1.8e-65 253.4 186 65.6
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 7.0e-65 251.5 223 60.5
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 7.7e-64 248.1 212 61.3
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 1.5e-62 243.8 203 68.0
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 6.8e-60 235.0 123 93.5
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 9.1e-57 224.6 208 62.5
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 7.2e-54 214.9 120 87.5
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 5.2e-52 208.8 166 65.1
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 9.2e-49 198.0 175 62.9
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 1.3e-42 177.6 198 50.0
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 1.1e-41 174.5 187 54.0
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 1.1e-41 174.5 94 86.2
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 1.5e-35 154.1 129 65.1
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 5.6e-30 135.6 75 86.7
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 3.2e-25 119.8 65 84.6
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 1.1e-20 104.8 58 87.9
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 6.9e-12 75.5 102 52.9


User provided reference genes

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