Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13769 Nelumbo nucifera HOM05D001846 ORTHO05D005785 3.2e-134 481.9 264 100.0
Nn7g36246 Nelumbo nucifera HOM05D001846 ORTHO05D005785 7.7e-88 327.8 321 65.7
TAR369G0438 Trochodendron aralioides HOM05D001846 ORTHO05D005785 3.1e-52 209.5 312 47.4
TAR369G0720 Trochodendron aralioides HOM05D001846 ORTHO05D005785 5.8e-51 205.3 312 47.1
MBI04_g43760_MAGBIO Magnolia biondii HOM05D001846 ORTHO05D005785 5.1e-39 165.6 258 43.8
Aqoxy2G00165 Aquilegia oxysepala HOM05D001846 ORTHO05D005785 7.3e-38 161.8 290 39.3
GSVIVG01025241001 Vitis vinifera HOM05D001846 ORTHO05D005785 1.6e-37 160.6 304 43.4
Cfa009785 Carpinus fangiana HOM05D001846 ORTHO05D005785 3.4e-35 152.9 310 40.6
Dinv36247 Davidia involucrata HOM05D001846 ORTHO05D005785 2.2e-34 150.2 282 42.6
Actinidia06915 Actinidia chinensis HOM05D001846 ORTHO05D005785 3.8e-34 149.4 308 39.9
PSO700G0220 Papaver somniferum HOM05D001846 ORTHO05D005785 1.4e-33 147.5 300 38.3
EL10Ac4g10235 Beta vulgaris HOM05D001846 ORTHO05D005785 4.2e-33 146.0 279 39.1
QL01p004435 Quercus lobata HOM05D001846 ORTHO05D005785 4.2e-33 146.0 288 41.3
QL01p004534 Quercus lobata HOM05D001846 ORTHO05D005785 4.2e-33 146.0 288 41.3
Thecc.09G235700 Theobroma cacao HOM05D001846 ORTHO05D005785 1.6e-32 144.1 277 40.1
Thecc.09G236100 Theobroma cacao HOM05D001846 ORTHO05D005785 1.6e-32 144.1 277 40.1
PSO170G6025 Papaver somniferum HOM05D001846 ORTHO05D005785 2.7e-32 143.3 294 38.4
Haze_23151 Corylus avellana HOM05D001846 ORTHO05D005785 6.6e-31 138.7 295 41.0
AUR62000135 Chenopodium quinoa HOM05D001846 ORTHO05D005785 1.1e-30 137.9 281 40.6
AUR62019315 Chenopodium quinoa HOM05D001846 ORTHO05D005785 1.5e-30 137.5 277 41.2
Ah.06g194060 Amaranthus hybridus HOM05D001846 ORTHO05D005785 6.2e-29 132.1 281 39.1
Atru.chr3.2697 Acer truncatum HOM05D001846 ORTHO05D005785 1.1e-28 131.3 311 38.6
Duzib150G0388 Durio zibethinus HOM05D001846 ORTHO05D005785 4.0e-28 129.4 278 38.8
Cc01_g04530 Coffea canephora HOM05D001846 ORTHO05D005785 1.5e-27 127.5 300 34.7
Dinv22169 Davidia involucrata HOM05D001846 ORTHO05D005785 1.5e-27 127.5 283 41.0
Sabra09G0038200 Salix brachista HOM05D001846 ORTHO05D005785 1.3e-26 124.4 308 36.0
CiPaw.13G159200 Carya illinoinensis HOM05D001846 ORTHO05D005785 2.2e-26 123.6 283 37.1
Manes.06G163200 Manihot esculenta HOM05D001846 ORTHO05D005785 2.2e-26 123.6 273 39.2
Solyc11g065630.3 Solanum lycopersicum HOM05D001846 ORTHO05D005785 8.4e-26 121.7 296 35.1
Potri.009G052400 Populus trichocarpa HOM05D001846 ORTHO05D005785 4.2e-25 119.4 307 35.8
Hma1.2p1_1313F.1_g274970 Hydrangea macrophylla HOM05D001846 ORTHO05D005785 9.3e-25 118.2 278 38.5
TWI60G1588 Tripterygium wilfordii HOM05D001846 ORTHO05D005785 1.2e-24 117.9 276 36.6
Actinidia16341 Actinidia chinensis HOM05D001846 ORTHO05D005785 4.6e-24 115.9 238 39.5
Manes.14G003700 Manihot esculenta HOM05D001846 ORTHO05D005785 7.9e-24 115.2 272 36.8
Nn6g35051 Nelumbo nucifera HOM05D001846 ORTHO05D005785 3.0e-23 113.2 137 54.0
CiPaw.14G118000 Carya illinoinensis HOM05D001846 ORTHO05D005785 3.9e-23 112.8 206 42.2
DCAR_023761 Daucus carota HOM05D001846 ORTHO05D005785 3.9e-23 112.8 262 36.3
ClCG02G023130 Citrullus lanatus HOM05D001846 ORTHO05D005785 5.1e-23 112.5 264 37.5
Sabra16G0155900 Salix brachista HOM05D001846 ORTHO05D005785 5.1e-23 112.5 306 35.6
Sopen11g025350 Solanum pennellii HOM05D001846 ORTHO05D005785 8.7e-23 111.7 300 33.7
CDE05G3609 Ceratophyllum demersum HOM05D001846 ORTHO05D005785 1.9e-22 110.5 279 36.2
Gorai.006G127900 Gossypium raimondii HOM05D001846 ORTHO05D005785 1.9e-22 110.5 285 34.7
Gohir.D09G110300 Gossypium hirsutum HOM05D001846 ORTHO05D005785 9.6e-22 108.2 285 34.0
Sed0016770 Sechium edule HOM05D001846 ORTHO05D005785 1.3e-21 107.8 259 35.9
Lj1A326G19 Lonicera japonica HOM05D001846 ORTHO05D005785 2.8e-21 106.7 206 39.3
Duzib168G1640 Durio zibethinus HOM05D001846 ORTHO05D005785 3.7e-21 106.3 281 35.9
Sc16g0011440 Simmondsia chinensis HOM05D001846 ORTHO05D005785 3.7e-21 106.3 275 34.9
CsaV3_6G039320 Cucumis sativus L. HOM05D001846 ORTHO05D005785 6.2e-21 105.5 260 36.9
Lj3g0017471 Lotus japonicus HOM05D001846 ORTHO05D005785 1.1e-20 104.8 282 35.5
Potri.001G256700 Populus trichocarpa HOM05D001846 ORTHO05D005785 1.1e-20 104.8 306 34.6
CDE05G0547 Ceratophyllum demersum HOM05D001846 ORTHO05D005785 5.3e-20 102.4 254 36.2
MD11G1191400 Malus domestica HOM05D001846 ORTHO05D005785 6.9e-20 102.1 284 35.9
Nn2g13771 Nelumbo nucifera HOM05D067471 ORTHO05D005785 6.9e-20 102.1 65 76.9
Nn8g40577 Nelumbo nucifera HOM05D067471 ORTHO05D005785 6.9e-20 102.1 65 76.9
COL.COLO4_06126 Corchorus olitorius HOM05D001846 ORTHO05D005785 1.2e-19 101.3 154 47.4
CANSAT54G0460 Cannabis sativa HOM05D001846 ORTHO05D005785 1.5e-19 100.9 296 34.8
ATR0332G095 Amborella trichopoda HOM05D001846 ORTHO05D005785 2.6e-19 100.1 258 34.9
Prupe.4G251400 Prunus persica HOM05D001846 ORTHO05D005785 2.6e-19 100.1 277 36.5
FAN25G3220 Fragaria x ananassa HOM05D001846 ORTHO05D005785 3.4e-19 99.8 274 36.9
Cpa.g.sc84.42 Carica papaya HOM05D001846 ORTHO05D005785 1.0e-18 98.2 278 32.7
Ciclev10014939m.g Citrus clementina HOM05D001846 ORTHO05D005785 1.0e-18 98.2 277 34.7
MELO3C014586.2 Cucumis melo HOM05D001846 ORTHO05D005785 1.0e-18 98.2 262 36.6
CAN.G71.16 Capsicum annuum HOM05D001846 ORTHO05D005785 1.7e-18 97.4 302 31.5
Hund22024 Selenicereus undatus HOM05D001846 ORTHO05D005785 2.9e-18 96.7 270 33.0
Glyma.12G019500 Glycine max HOM05D001846 ORTHO05D005785 3.8e-18 96.3 269 33.5
Nitab4.5_0002741g0070 Nicotiana tabacum HOM05D001846 ORTHO05D005785 8.4e-18 95.1 297 32.3
Lsat_1_v5_gn_6_25301 Lactuca sativa HOM05D001846 ORTHO05D005785 1.4e-17 94.4 292 33.6
Phvul.011G021900 Phaseolus vulgaris HOM05D001846 ORTHO05D005785 1.4e-17 94.4 262 32.8
SGA_v2.0_scaffold8G04581 Striga asiatica HOM05D001846 ORTHO05D005785 1.4e-17 94.4 241 36.9
VMungo1127G1936 Vigna mungo HOM05D001846 ORTHO05D005785 1.9e-17 94.0 264 33.7
Glyma.11G093300 Glycine max HOM05D001846 ORTHO05D005785 3.2e-17 93.2 270 32.6
RcHm_v2.0_Chr5g0052391 Rosa chinensis HOM05D001846 ORTHO05D005785 4.6e-16 89.4 130 50.0
Gohir.D13G220500 Gossypium hirsutum HOM05D001846 ORTHO05D005785 6.0e-16 89.0 279 32.3
Oeu026419.1 Olea europaea HOM05D001846 ORTHO05D005785 7.9e-16 88.6 297 32.3
ECA233G5307 Erigeron canadensis HOM05D001846 ORTHO05D005785 1.8e-15 87.4 283 32.5
FvH4_3g28690 Fragaria vesca HOM05D001846 ORTHO05D005785 3.0e-15 86.7 288 34.4
FAN21G3148 Fragaria x ananassa HOM05D001846 ORTHO05D005785 3.9e-15 86.3 283 35.0
MSTRG.18433 Avicennia marina HOM05D001846 ORTHO05D005785 6.7e-15 85.5 301 32.2
Gorai.013G251400 Gossypium raimondii HOM05D001846 ORTHO05D005785 6.7e-15 85.5 283 32.5
Lj3g0008415 Lotus japonicus HOM05D001846 ORTHO05D005785 8.7e-15 85.1 225 34.2
Lj3g0026618 Lotus japonicus HOM05D001846 ORTHO05D005785 8.7e-15 85.1 225 34.2
Ca_18965_v3 Cicer arietinum L. HOM05D001846 ORTHO05D005785 7.4e-14 82.0 237 33.8
FAN25G3740 Fragaria x ananassa HOM05D001846 ORTHO05D005785 1.6e-13 80.9 277 34.3
HanXRQChr13g0401091 Helianthus annuus HOM05D001846 ORTHO05D005785 3.7e-13 79.7 240 34.2
MBI04_g45701_MAGBIO Magnolia biondii HOM05D001846 ORTHO05D005785 4.8e-13 79.3 246 31.7
MD03G1173500 Malus domestica HOM05D001846 ORTHO05D005785 4.8e-13 79.3 281 34.2
Peaxi162Scf00004g02629 Petunia axillaris HOM05D001846 ORTHO05D005785 4.8e-13 79.3 130 42.3
MSTRG.12465 Avicennia marina HOM05D001846 ORTHO05D005785 1.1e-12 78.2 279 31.9
Eucgr.J00759 Eucalyptus grandis HOM05D001846 ORTHO05D005785 1.4e-12 77.8 288 32.6
Nitab4.5_0007154g0020 Nicotiana tabacum HOM05D001846 ORTHO05D005785 2.4e-12 77.0 128 44.5
QL02p066233 Quercus lobata HOM05D001846 ORTHO05D005785 2.4e-12 77.0 96 50.0
FAN25G3801 Fragaria x ananassa HOM05D001846 ORTHO05D005785 4.1e-12 76.3 240 33.8
PGR119G1478 Punica granatum HOM05D001846 ORTHO05D005785 4.1e-12 76.3 289 30.8
FAN16G0902 Fragaria x ananassa HOM05D001846 ORTHO05D005785 9.0e-12 75.1 312 31.7
Psat7g170880 Pisum sativum HOM05D001846 ORTHO05D005785 3.4e-11 73.2 131 39.7
FAN11G2083 Fragaria x ananassa HOM05D001846 ORTHO05D005785 1.3e-10 71.2 313 31.3
Medtr4g077160 Medicago truncatula HOM05D001846 ORTHO05D005785 5.0e-10 69.3 273 30.4
Rhsim13G0220400 Rhododendron simsii HOM05D001846 ORTHO05D005785 5.0e-10 69.3 222 31.1
Migut.D00610 Erythranthe guttata HOM05D001846 ORTHO05D005785 6.5e-10 68.9 210 33.3
Thhalv10011423m.g Eutrema salsugineum HOM05D001846 ORTHO05D005785 6.5e-10 68.9 281 29.2
HanXRQChr02g0051491 Helianthus annuus HOM05D001846 ORTHO05D005785 1.1e-09 68.2 271 28.4
vmacro04149 Vaccinium macrocarpon HOM05D001846 ORTHO05D005785 2.5e-09 67.0 278 30.6
SalBow1G1572 Salvia bowleyana HOM05D001846 ORTHO05D005785 5.5e-09 65.9 261 29.9
THA.LOC104817913 Tarenaya hassleriana HOM05D001846 ORTHO05D005785 1.6e-08 64.3 222 31.5
Lalb_Chr19g0139851 Lupinus albus HOM05D001846 ORTHO05D005785 2.7e-08 63.5 130 39.2
Oeu016678.1 Olea europaea HOM05D001846 ORTHO05D005785 2.7e-08 63.5 157 32.5
arahy.Tifrunner.gnm1.ann1.563I02 Arachis hypogaea HOM05D001846 ORTHO05D005785 7.9e-08 62.0 298 27.9
Gohir.A09G113700 Gossypium hirsutum HOM05D001846 ORTHO05D005785 7.9e-08 62.0 181 32.0
arahy.Tifrunner.gnm1.ann1.8PYD8T Arachis hypogaea HOM05D001846 ORTHO05D005785 1.0e-07 61.6 239 30.1
Glyma.06G203350 Glycine max HOM05D001846 ORTHO05D005785 1.3e-07 61.2 120 40.0
THA.LOC104811173 Tarenaya hassleriana HOM05D001846 ORTHO05D005785 1.3e-07 61.2 128 37.5
AT1G51405 Arabidopsis thaliana HOM05D001846 ORTHO05D005785 8.7e-07 58.5 286 27.6
Carub.0001s4028 Capsella rubella HOM05D001846 ORTHO05D005785 4.3e-06 56.2 290 27.9


User provided reference genes

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