Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13681 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.7e-42 174.9 85 100.0
SHI10489 Sapria himalayana HOM05D000002 ORTHO05D004433 5.8e-29 130.6 77 77.9
SHI32313 Sapria himalayana HOM05D000002 ORTHO05D004433 6.4e-28 127.1 77 75.3
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.4e-28 126.7 77 76.6
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.4e-28 126.7 77 76.6
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-27 126.3 77 75.3
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-27 125.9 74 75.7
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 1.9e-27 125.6 77 74.0
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-27 125.2 77 74.0
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-27 125.2 77 75.3
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-27 124.4 77 74.0
SHI32919 Sapria himalayana HOM05D000002 ORTHO05D004433 4.2e-27 124.4 77 74.0
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 5.5e-27 124.0 77 75.3
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 7.1e-27 123.6 77 74.0
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 9.3e-27 123.2 77 72.7
MD14G1034300 Malus domestica HOM05D000038 ORTHO05D004433 1.2e-26 122.9 76 75.0
SHI43060 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-26 122.9 77 72.7
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 2.1e-26 122.1 77 74.0
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 2.7e-26 121.7 77 72.7
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-26 121.7 77 72.7
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-25 119.8 77 67.5
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 5.1e-25 117.5 77 71.4
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.7e-25 116.7 77 66.2
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.7e-25 116.7 77 66.2
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 8.7e-25 116.7 75 74.7
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-24 116.3 77 66.2
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-24 115.5 77 64.9
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-24 115.2 77 63.6
CAN.G401.9 Capsicum annuum HOM05D000002 ORTHO05D004433 3.3e-24 114.8 73 72.6
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-24 114.8 75 73.3
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-24 114.4 77 64.9
Gohir.D10G094150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 1.3e-23 112.8 76 73.7
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-23 111.3 75 68.0
SHI18425 Sapria himalayana HOM05D000002 ORTHO05D004433 1.8e-22 109.0 66 75.8
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-22 107.5 77 64.9
SHI00406 Sapria himalayana HOM05D000002 ORTHO05D004433 9.0e-22 106.7 66 72.7
SHI10029 Sapria himalayana HOM05D000002 ORTHO05D004433 9.0e-22 106.7 66 72.7
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 2.0e-21 105.5 77 67.5
Oeu001115.1 Olea europaea HOM05D000002 ORTHO05D004433 4.5e-21 104.4 77 66.2
Oeu035997.1 Olea europaea HOM05D000002 ORTHO05D004433 4.5e-21 104.4 77 66.2
SHI45691 Sapria himalayana HOM05D000002 ORTHO05D004433 1.7e-20 102.4 77 66.2
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.9e-20 101.7 75 64.0
SHI22389 Sapria himalayana HOM05D000002 ORTHO05D004433 6.5e-20 100.5 77 62.3
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-19 99.0 77 51.9
Oeu012846.1 Olea europaea HOM05D003971 ORTHO05D004433 1.9e-19 99.0 77 61.0
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-19 98.2 73 64.4
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-19 98.2 77 54.5
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.1e-19 97.1 77 55.8
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-18 95.9 73 53.4
Oeu034209.1 Olea europaea HOM05D000002 ORTHO05D004433 1.6e-18 95.9 77 59.7
Prupe.7G032100 Prunus persica HOM05D000002 ORTHO05D004433 2.1e-18 95.5 65 69.2
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 2.1e-18 95.5 59 72.9
CSS0046925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 4.6e-18 94.4 59 72.9
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 4.6e-18 94.4 73 60.3
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 1.8e-17 92.4 59 69.5
Oeu055579.1 Olea europaea HOM05D000002 ORTHO05D004433 6.7e-17 90.5 77 59.7
Oeu003015.1 Olea europaea HOM05D000002 ORTHO05D004433 1.1e-16 89.7 68 63.2
Ah.04g159010 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.9e-16 89.0 77 54.5
Lsat_1_v5_gn_4_123500 Lactuca sativa HOM05D000002 ORTHO05D004433 2.5e-16 88.6 60 65.0
Oeu022773.1 Olea europaea HOM05D000002 ORTHO05D004433 2.5e-16 88.6 77 58.4
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 5.7e-16 87.4 77 59.7
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 7.4e-16 87.0 77 53.2
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 9.7e-16 86.7 85 43.5
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.6e-15 85.9 77 51.9
Oeu050054.1 Olea europaea HOM05D000002 ORTHO05D004433 1.6e-15 85.9 84 53.6
Ah.16g106880 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.2e-15 85.5 77 51.9
Glyma.07G117100 Glycine max HOM05D000002 ORTHO05D004433 2.2e-15 85.5 66 60.6
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 6.3e-15 84.0 77 51.9
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 8.2e-15 83.6 77 50.6
Nn5g27722 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.1e-14 83.2 84 41.7
Cpa.g.sc11.103 Carica papaya HOM05D000002 ORTHO05D004433 1.4e-14 82.8 84 42.9
MD01G1222200 Malus domestica HOM05D000002 ORTHO05D004433 1.8e-14 82.4 99 45.5
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.4e-14 82.0 84 39.3
Dinv02026 Davidia involucrata HOM05D028709 ORTHO05D004433 3.1e-14 81.6 76 47.4
Ah.03g145180 Amaranthus hybridus HOM05D000002 ORTHO05D004433 4.1e-14 81.3 77 50.6
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 9.0e-14 80.1 64 57.8
Gohir.D08G274150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 9.0e-14 80.1 79 51.9
Gorai.004G292700 Gossypium raimondii HOM05D000002 ORTHO05D004433 9.0e-14 80.1 79 51.9
QL05p063530 Quercus lobata HOM05D000002 ORTHO05D004433 2.0e-13 79.0 70 54.3
PGSC0003DMG400033163 Solanum tuberosum HOM05D000002 ORTHO05D004433 2.0e-13 79.0 78 47.4
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.4e-13 78.2 84 36.9
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 3.4e-13 78.2 79 45.6
Sopen09g027930 Solanum pennellii HOM05D000002 ORTHO05D004433 5.9e-13 77.4 80 42.5
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 7.7e-13 77.0 48 72.9
Nn1g02075 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.0e-12 76.6 79 39.2
Thecc.03G106900 Theobroma cacao HOM05D000002 ORTHO05D004433 2.2e-12 75.5 78 44.9
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.9e-12 75.1 77 37.7
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 2.9e-12 75.1 77 50.6
SHI09919 Sapria himalayana HOM05D000002 ORTHO05D004433 2.9e-12 75.1 42 85.7
Sopen11g022850 Solanum pennellii HOM05D000002 ORTHO05D004433 5.0e-12 74.3 81 42.0
Nn4g25779 Nelumbo nucifera HOM05D000002 ORTHO05D004433 6.5e-12 73.9 80 40.0
Oeu033717.1 Olea europaea HOM05D000002 ORTHO05D004433 1.1e-11 73.2 60 55.0
SHI02071 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-11 73.2 54 64.8
PGSC0003DMG400023646 Solanum tuberosum HOM05D000002 ORTHO05D004433 1.4e-11 72.8 65 50.8
Sopen09g028980 Solanum pennellii HOM05D000002 ORTHO05D004433 2.5e-11 72.0 77 39.0
Nn3g20324 Nelumbo nucifera HOM05D000002 ORTHO05D004433 3.2e-11 71.6 77 39.0
CSS0020823 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-11 70.5 39 79.5
Gorai.012G076500 Gossypium raimondii HOM05D000002 ORTHO05D004433 1.2e-10 69.7 63 55.6
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.2e-10 69.7 53 54.7
Nn1g06847 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.1e-10 68.9 76 46.1
Sopen03g007650 Solanum pennellii HOM05D000002 ORTHO05D004433 3.6e-10 68.2 85 38.8
Glyma.01G070601 Glycine max HOM05D000002 ORTHO05D004433 6.1e-10 67.4 78 37.2
Oeu051241.1 Olea europaea HOM05D000002 ORTHO05D004433 6.1e-10 67.4 71 50.7
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.0e-09 66.6 84 39.3
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-09 65.5 71 45.1
Prupe.2G033500 Prunus persica HOM05D000002 ORTHO05D004433 5.1e-09 64.3 78 44.9
Cc05_g05430 Coffea canephora HOM05D000002 ORTHO05D004433 6.7e-09 63.9 78 38.5
CAN.G350.7 Capsicum annuum HOM05D000002 ORTHO05D004433 1.5e-08 62.8 66 43.9
Dinv02177 Davidia involucrata HOM05D000002 ORTHO05D004433 1.9e-08 62.4 41 68.3
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 5.7e-08 60.8 36 77.8
PGR044G0355 Punica granatum HOM05D000097 ORTHO05D000041 5.7e-08 60.8 81 39.5
Sed0004206 Sechium edule HOM05D000002 ORTHO05D004433 5.7e-08 60.8 42 69.0
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 7.4e-08 60.5 78 37.2
Sopen12g018200 Solanum pennellii HOM05D000014 ORTHO05D004433 1.7e-07 59.3 36 72.2
PGR044G1072 Punica granatum HOM05D000097 ORTHO05D000041 2.2e-07 58.9 80 36.2
PGR044G1153 Punica granatum HOM05D000097 ORTHO05D000041 2.2e-07 58.9 80 36.2
Nn2g15606 Nelumbo nucifera HOM05D000006 ORTHO05D004433 2.8e-07 58.5 84 33.3
PGR044G1025 Punica granatum HOM05D000097 ORTHO05D000041 3.7e-07 58.2 76 36.8
ECA247G1586 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.3e-07 57.4 53 47.2
SHI03642 Sapria himalayana HOM05D001260 ORTHO05D002424 1.1e-06 56.6 39 69.2
Nn5g30038 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.4e-06 56.2 53 41.5
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 1.8e-06 55.8 78 35.9
Nn2g15808 Nelumbo nucifera HOM05D000006 ORTHO05D004433 2.4e-06 55.5 84 32.1
SEGI_22009 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.4e-06 55.5 75 33.3
Sopen03g027090 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-06 55.5 77 37.7
Nn4g24889 Nelumbo nucifera HOM05D000002 ORTHO05D004433 3.1e-06 55.1 63 39.7
ATR0001G049 Amborella trichopoda HOM05D000002 ORTHO05D004433 4.1e-06 54.7 66 42.4
Sopen11g022370 Solanum pennellii HOM05D000036 ORTHO05D005472 4.1e-06 54.7 78 37.2
ATR0049G043 Amborella trichopoda HOM05D000097 ORTHO05D000041 5.3e-06 54.3 67 38.8


User provided reference genes

Program Settings