Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13447 Nelumbo nucifera HOM05D033648 ORTHO05D273670 3.8e-20 100.5 50 100.0
Nn1g04428 Nelumbo nucifera HOM05D033648 ORTHO05D281813 1.7e-15 85.1 45 93.3
Nn1g07592 Nelumbo nucifera HOM05D004037 ORTHO05D004744 1.7e-15 85.1 46 93.5
BcaC02g07140 Brassica carinata HOM05D004037 ORTHO05D004744 3.1e-06 54.3 39 71.8
Aqoxy2G03110 Aquilegia oxysepala HOM05D004037 ORTHO05D004744 4.1e-06 53.9 51 62.7
CAN.G134.227 Capsicum annuum HOM05D004037 ORTHO05D004744 4.1e-06 53.9 51 62.7
Duzib093G0613 Durio zibethinus HOM05D004037 ORTHO05D004744 4.1e-06 53.9 51 62.7
Lj6C283G4 Lonicera japonica HOM05D004037 ORTHO05D004744 4.1e-06 53.9 51 62.7
Nn048s41912 Nelumbo nucifera HOM05D004037 ORTHO05D004744 4.1e-06 53.9 51 62.7
Nn3g17600 Nelumbo nucifera HOM05D004037 ORTHO05D004744 4.1e-06 53.9 51 62.7
Solyc01g098380.4 Solanum lycopersicum HOM05D004037 ORTHO05D004744 4.1e-06 53.9 51 62.7
Sopen01g041950 Solanum pennellii HOM05D004037 ORTHO05D004744 4.1e-06 53.9 51 62.7
PGSC0003DMG400028592 Solanum tuberosum HOM05D004037 ORTHO05D004744 4.1e-06 53.9 51 62.7
Thecc.01G117800 Theobroma cacao HOM05D004037 ORTHO05D004744 4.1e-06 53.9 51 62.7
Thecc.05G172500 Theobroma cacao HOM05D004037 ORTHO05D004744 4.1e-06 53.9 51 62.7
GSVIVG01038260001 Vitis vinifera HOM05D004037 ORTHO05D004744 4.1e-06 53.9 51 62.7
Duzib128G0968 Durio zibethinus HOM05D004037 ORTHO05D004744 5.3e-06 53.5 51 60.8
Peaxi162Scf00434g00730 Petunia axillaris HOM05D004037 ORTHO05D004744 7.0e-06 53.1 51 60.8
BcaB06g29352 Brassica carinata HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
BcaB06g29511 Brassica carinata HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
BcaC01g05190 Brassica carinata HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
A03p24640 Brassica napus HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
A04p33160 Brassica napus HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
C03p29380 Brassica napus HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
C04p70860 Brassica napus HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
BolC3t15285H Brassica oleracea HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
BolC4t28586H Brassica oleracea HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
BraA03t11670Z Brassica rapa HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
BraA04t18775Z Brassica rapa HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
Ca_23565_v3 Cicer arietinum L. HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
Thhalv10001534m.g Eutrema salsugineum HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
Glyma.07G060300 Glycine max HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
Glyma.16G028900 Glycine max HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
Hma1.2p1_0150F.1_g066850 Hydrangea macrophylla HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
Medtr8g028145 Medicago truncatula HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
Nitab4.5_0001165g0010 Nicotiana tabacum HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
Peaxi162Scf00071g00719 Petunia axillaris HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
Peaxi162Scf00434g00740 Petunia axillaris HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
Phvul.001G003100 Phaseolus vulgaris HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
Phvul.010G108900 Phaseolus vulgaris HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
QL10p064641 Quercus lobata HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
QL10p065764 Quercus lobata HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
TPR.G5068 Trifolium pratense HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8
VMungo1383G1316 Vigna mungo HOM05D004037 ORTHO05D004744 9.1e-06 52.8 51 60.8


User provided reference genes

Program Settings