Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13426 Nelumbo nucifera HOM05D006297 ORTHO05D007873 3.7e-164 582.0 425 100.0
Dinv34277 Davidia involucrata HOM05D006297 ORTHO05D007873 2.2e-60 237.3 436 41.1
Manes.02G129500 Manihot esculenta HOM05D006297 ORTHO05D007873 4.6e-58 229.6 428 39.3
GSVIVG01031399001 Vitis vinifera HOM05D006297 ORTHO05D007873 2.3e-57 227.3 427 40.7
Actinidia33772 Actinidia chinensis HOM05D006297 ORTHO05D007873 2.8e-55 220.3 466 38.0
QL01p030412 Quercus lobata HOM05D006297 ORTHO05D007873 1.1e-54 218.4 479 36.7
Hma1.2p1_0615F.1_g189690 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 6.9e-54 215.7 415 39.3
Eucgr.B02311 Eucalyptus grandis HOM05D006297 ORTHO05D007873 2.6e-53 213.8 451 39.9
TAR369G0304 Trochodendron aralioides HOM05D006297 ORTHO05D007873 4.9e-52 209.5 384 43.5
PGR119G2469 Punica granatum HOM05D006297 ORTHO05D007873 1.1e-51 208.4 465 36.8
MELO3C020609.2 Cucumis melo HOM05D006297 ORTHO05D007873 3.5e-50 203.4 397 38.3
Sabra09G0025100 Salix brachista HOM05D006297 ORTHO05D010418 3.5e-50 203.4 423 37.4
Haze_24152 Corylus avellana HOM05D006297 ORTHO05D007873 1.8e-49 201.1 445 37.5
CsaV3_1G034520 Cucumis sativus L. HOM05D006297 ORTHO05D007873 3.9e-49 199.9 404 38.6
TWI79G0566 Tripterygium wilfordii HOM05D000001 ORTHO05D010418 8.7e-49 198.7 417 44.1
Ciclev10029821m.g Citrus clementina HOM05D006297 ORTHO05D007873 3.7e-47 193.4 434 35.3
Nitab4.5_0006916g0050 Nicotiana tabacum HOM05D006297 ORTHO05D007873 3.7e-47 193.4 449 35.4
Sed0017584 Sechium edule HOM05D006297 ORTHO05D007873 3.7e-47 193.4 411 34.8
Potri.009G035300 Populus trichocarpa HOM05D006297 ORTHO05D007873 4.8e-47 193.0 439 35.3
ClCG03G001300 Citrullus lanatus HOM05D006297 ORTHO05D007873 1.4e-46 191.4 389 38.0
Peaxi162Scf00481g00328 Petunia axillaris HOM05D006297 ORTHO05D007873 5.3e-46 189.5 417 36.7
Potri.001G243900 Populus trichocarpa HOM05D006297 ORTHO05D007873 3.4e-45 186.8 442 35.3
Aqoxy1G00878 Aquilegia oxysepala HOM05D006297 ORTHO05D007873 7.6e-45 185.7 452 45.1
CSS0020880 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 1.3e-44 184.9 430 36.7
CiPaw.13G089900 Carya illinoinensis HOM05D006297 ORTHO05D007873 2.2e-44 184.1 473 34.2
Sed0011562 Sechium edule HOM05D006297 ORTHO05D007873 2.9e-44 183.7 398 34.4
Solyc06g076370.4 Solanum lycopersicum HOM05D006297 ORTHO05D007873 1.4e-43 181.4 421 34.4
Sopen06g032780 Solanum pennellii HOM05D006297 ORTHO05D007873 1.6e-42 177.9 422 34.6
Sc12g0001260 Simmondsia chinensis HOM05D006297 ORTHO05D007873 4.6e-42 176.4 396 36.4
THA.LOC104799430 Tarenaya hassleriana HOM05D006297 ORTHO05D007873 5.1e-41 172.9 450 34.0
Nn2g11187 Nelumbo nucifera HOM05D006297 ORTHO05D007873 2.5e-40 170.6 364 37.1
Duzib168G2114 Durio zibethinus HOM05D006297 ORTHO05D007873 1.3e-39 168.3 433 32.1
Sabra16G0148100 Salix brachista HOM05D000026 ORTHO05D000094 2.8e-39 167.2 458 32.8
Thecc.09G316300 Theobroma cacao HOM05D006297 ORTHO05D007873 4.8e-39 166.4 421 34.0
COL.COLO4_18571 Corchorus olitorius HOM05D006297 ORTHO05D007873 6.3e-39 166.0 401 36.2
CANSAT54G0582 Cannabis sativa HOM05D006297 ORTHO05D007873 8.2e-39 165.6 512 38.1
MD11G1095400 Malus domestica HOM05D006297 ORTHO05D007873 8.2e-39 165.6 513 37.6
Cfa011548 Carpinus fangiana HOM05D006297 ORTHO05D007873 1.4e-38 164.9 453 34.0
Migut.D00880 Erythranthe guttata HOM05D006297 ORTHO05D007873 5.3e-38 162.9 498 33.1
Cc01_g13310 Coffea canephora HOM05D006297 ORTHO05D007873 6.9e-38 162.5 504 32.3
CAN.G394.75 Capsicum annuum HOM05D006297 ORTHO05D007873 1.2e-37 161.8 424 32.3
RcHm_v2.0_Chr5g0066301 Rosa chinensis HOM05D006297 ORTHO05D007873 1.5e-37 161.4 537 42.6
AUR62001745 Chenopodium quinoa HOM05D006297 ORTHO05D007873 2.6e-37 160.6 446 32.7
Ca_20618_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 5.0e-36 156.4 466 34.3
Rhsim13G0077500 Rhododendron simsii HOM05D000001 ORTHO05D010418 2.5e-35 154.1 401 33.2
Prupe.6G070900 Prunus persica HOM05D006297 ORTHO05D007873 5.5e-35 152.9 406 47.3
Medtr4g064830 Medicago truncatula HOM05D006297 ORTHO05D007873 1.6e-34 151.4 468 32.7
MSTRG.18559 Avicennia marina HOM05D006297 ORTHO05D007873 7.9e-34 149.1 473 33.0
MBI05_g35633_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 1.8e-33 147.9 357 33.1
AUR62020026 Chenopodium quinoa HOM05D006297 ORTHO05D007873 3.0e-33 147.1 389 32.1
PGSC0003DMG400030329 Solanum tuberosum HOM05D006297 ORTHO05D007873 4.3e-32 143.3 335 34.0
FvH4_3g36910 Fragaria vesca HOM05D006297 ORTHO05D007873 1.7e-31 141.4 593 31.2
Glyma.11G136300 Glycine max HOM05D006297 ORTHO05D007873 1.7e-31 141.4 470 37.2
Lalb_Chr22g0352441 Lupinus albus HOM05D006297 ORTHO05D007873 1.7e-31 141.4 454 34.1
CSS0015831 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 4.8e-31 139.8 457 33.0
Glyma.12G060000 Glycine max HOM05D006297 ORTHO05D007873 6.3e-31 139.4 443 30.0
DCAR_007431 Daucus carota HOM05D006297 ORTHO05D000003 1.8e-30 137.9 412 32.3
VMungo1127G1804 Vigna mungo HOM05D006297 ORTHO05D007873 5.3e-30 136.3 436 33.5
SGA_v2.0_scaffold54G19479 Striga asiatica HOM05D006297 ORTHO05D007873 1.2e-29 135.2 442 30.3
Glyma.13G338800 Glycine max HOM05D006297 ORTHO05D007873 1.5e-29 134.8 167 52.7
Psat5g118640 Pisum sativum HOM05D006297 ORTHO05D007873 4.5e-29 133.3 177 46.3
Nitab4.5_0023946g0010 Nicotiana tabacum HOM05D006297 ORTHO05D007873 5.9e-29 132.9 503 29.0
Lalb_Chr03g0026471 Lupinus albus HOM05D006297 ORTHO05D007873 1.3e-28 131.7 430 30.7
Glyma.15G035500 Glycine max HOM05D006297 ORTHO05D007873 2.9e-28 130.6 191 46.1
Lj3g0014453 Lotus japonicus HOM05D006297 ORTHO05D007873 5.0e-28 129.8 467 31.9
Phvul.011G061900 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 6.5e-28 129.4 407 31.0
Lj3g0003832 Lotus japonicus HOM05D006297 ORTHO05D007873 1.1e-27 128.6 171 48.0
Lalb_Chr01g0003491 Lupinus albus HOM05D006297 ORTHO05D007873 1.4e-27 128.3 461 31.9
Psat7g210960 Pisum sativum HOM05D006297 ORTHO05D007873 2.5e-27 127.5 408 31.1
TPR.G23574 Trifolium pratense HOM05D006297 ORTHO05D007873 1.2e-26 125.2 430 31.9
Dinv17042 Davidia involucrata HOM05D006297 ORTHO05D007873 4.7e-26 123.2 123 56.1
Dinv43112 Davidia involucrata HOM05D006297 ORTHO05D007873 4.7e-26 123.2 123 56.1
arahy.Tifrunner.gnm1.ann1.19P32Y Arachis hypogaea HOM05D006297 ORTHO05D007873 6.7e-25 119.4 134 53.7
arahy.Tifrunner.gnm1.ann1.2MBI16 Arachis hypogaea HOM05D006297 ORTHO05D007873 1.5e-24 118.2 133 53.4
Ca_01304_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 1.5e-24 118.2 177 45.8
Medtr2g097710 Medicago truncatula HOM05D006297 ORTHO05D007873 2.6e-24 117.5 166 45.8
FAN11G1892 Fragaria x ananassa HOM05D006297 ORTHO05D007873 7.4e-24 115.9 594 27.4
BcaB05g23510 Brassica carinata HOM05D006297 ORTHO05D007873 9.7e-24 115.5 457 26.3
TPR.G6873 Trifolium pratense HOM05D006297 ORTHO05D007873 1.7e-23 114.8 171 43.9
A01p26050 Brassica napus HOM05D006297 ORTHO05D007873 2.8e-23 114.0 457 26.0
Gohir.D07G104500 Gossypium hirsutum HOM05D006297 ORTHO05D007873 3.7e-23 113.6 414 30.2
ATR0559G346 Amborella trichopoda HOM05D006297 ORTHO05D007873 4.8e-23 113.2 346 34.4
CARHR154920 Cardamine hirsuta HOM05D006297 ORTHO05D007873 4.8e-23 113.2 466 26.2
Thhalv10002567m.g Eutrema salsugineum HOM05D006297 ORTHO05D007873 8.2e-23 112.5 483 27.5
PSO339G0783 Papaver somniferum HOM05D006297 ORTHO05D007873 8.2e-23 112.5 167 47.3
Hund04923 Selenicereus undatus HOM05D006297 ORTHO05D007873 8.2e-23 112.5 400 29.8
Sp5g14970 Schrenkiella parvula HOM05D006297 ORTHO05D007873 1.1e-22 112.1 456 29.6
BraA01t02522Z Brassica rapa HOM05D006297 ORTHO05D007873 1.8e-22 111.3 422 27.5
PSO513G0159 Papaver somniferum HOM05D006297 ORTHO05D007873 2.4e-22 110.9 167 47.3
FAN16G1466 Fragaria x ananassa HOM05D006297 ORTHO05D007873 3.1e-22 110.5 571 28.5
Phvul.L008043 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 3.1e-22 110.5 162 46.3
AT3G46750 Arabidopsis thaliana HOM05D006297 ORTHO05D007873 4.1e-22 110.2 469 29.6
BcaC09g49771 Brassica carinata HOM05D006297 ORTHO05D007873 7.0e-22 109.4 457 25.2
Carub.0005s1301 Capsella rubella HOM05D006297 ORTHO05D007873 9.1e-22 109.0 467 29.3
Duzib170G0989 Durio zibethinus HOM05D006297 ORTHO05D007873 1.2e-21 108.6 380 29.7
Lalb_Chr24g0397191 Lupinus albus HOM05D006297 ORTHO05D007873 1.5e-21 108.2 149 48.3
BolC1t03251H Brassica oleracea HOM05D000026 ORTHO05D007873 7.7e-21 105.9 423 25.8
arahy.Tifrunner.gnm1.ann1.NT76K4 Arachis hypogaea HOM05D006297 ORTHO05D007873 1.3e-20 105.1 507 28.2
Hma1.2p1_0757F.1_g213410 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 1.7e-20 104.8 119 52.1
DCAR_018924 Daucus carota HOM05D006297 ORTHO05D007873 2.9e-20 104.0 408 29.2
Aa31LG4G15680 Aethionema arabicum HOM05D006297 ORTHO05D007873 5.0e-20 103.2 427 27.2
AL5G25730 Arabidopsis lyrata HOM05D006297 ORTHO05D007873 6.5e-20 102.8 464 28.7
arahy.Tifrunner.gnm1.ann1.FG1CRE Arachis hypogaea HOM05D006297 ORTHO05D007873 1.1e-19 102.1 494 28.5
FAN25G2608 Fragaria x ananassa HOM05D006297 ORTHO05D007873 1.1e-19 102.1 593 28.2
FAN21G2693 Fragaria x ananassa HOM05D006297 ORTHO05D007873 1.9e-19 101.3 593 26.5
A06p20810 Brassica napus HOM05D006297 ORTHO05D007873 2.5e-19 100.9 443 26.6
BcaC01g01889 Brassica carinata HOM05D006297 ORTHO05D007873 7.2e-19 99.4 405 26.2
C03p70940 Brassica napus HOM05D006297 ORTHO05D007873 7.2e-19 99.4 405 26.2
BolC3t19369H Brassica oleracea HOM05D006297 ORTHO05D007873 7.2e-19 99.4 405 26.2
VMungo1080G0409 Vigna mungo HOM05D006297 ORTHO05D007873 1.6e-18 98.2 167 43.7
unitig_899.g15423 Utricularia gibba HOM05D006297 ORTHO05D007873 2.1e-18 97.8 381 29.1
SalBow6G6944 Salvia bowleyana HOM05D006297 ORTHO05D007873 3.6e-18 97.1 509 40.9
Ah.08g219890 Amaranthus hybridus HOM05D006297 ORTHO05D007873 5.7e-16 89.7 101 54.5
EL10Ac7g16061 Beta vulgaris HOM05D006297 ORTHO05D007873 5.7e-16 89.7 430 29.8
Dinv42987 Davidia involucrata HOM05D006297 ORTHO05D007873 8.2e-15 85.9 432 26.4
CDE07G0208 Ceratophyllum demersum HOM05D006297 ORTHO05D007873 1.1e-14 85.5 137 38.0
MBI14_g08019_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 1.8e-14 84.7 354 28.2
CiPaw.14G065800 Carya illinoinensis HOM05D006297 ORTHO05D007873 2.4e-14 84.3 420 26.9
Dinv17043 Davidia involucrata HOM05D006297 ORTHO05D007873 5.3e-14 83.2 111 51.4
Dinv43111 Davidia involucrata HOM05D006297 ORTHO05D007873 5.3e-14 83.2 111 51.4
C01p33140 Brassica napus HOM05D006297 ORTHO05D007873 9.1e-14 82.4 186 31.7
Nn8g40921 Nelumbo nucifera HOM05D006297 ORTHO05D007873 2.6e-13 80.9 47 87.2
SalBow1G2607 Salvia bowleyana HOM05D006297 ORTHO05D007873 5.9e-13 79.7 99 47.5
BcaB02g10710 Brassica carinata HOM05D006297 ORTHO05D007873 1.3e-12 78.6 184 30.4
Lsat_1_v5_gn_8_72960 Lactuca sativa HOM05D006297 ORTHO05D007873 1.5e-11 75.1 419 22.9
Lsat_1_v5_gn_5_169521 Lactuca sativa HOM05D006297 ORTHO05D007873 7.2e-11 72.8 103 45.6
QL10p061553 Quercus lobata HOM05D006297 ORTHO05D007873 2.1e-10 71.2 112 42.9
HanXRQChr11g0340671 Helianthus annuus HOM05D006297 ORTHO05D007873 8.0e-10 69.3 75 52.0
QL10p066115 Quercus lobata HOM05D006297 ORTHO05D017888 4.0e-09 67.0 64 54.7
Manes.06G147200 Manihot esculenta HOM05D004189 ORTHO05D004092 8.3e-07 59.3 129 34.9
Actinidia34113 Actinidia chinensis HOM05D004189 ORTHO05D004092 3.1e-06 57.4 124 34.7
FAN01G1221 Fragaria x ananassa HOM05D013146 ORTHO05D004092 3.1e-06 57.4 104 37.5
FAN03G0039 Fragaria x ananassa HOM05D013146 ORTHO05D004092 3.1e-06 57.4 105 37.1
HanXRQChr05g0135261 Helianthus annuus HOM05D006297 ORTHO05D007873 4.1e-06 57.0 409 23.7
Sabra15G0153700 Salix brachista HOM05D004189 ORTHO05D004092 5.3e-06 56.6 107 32.7
Glyma.16G193200 Glycine max HOM05D004189 ORTHO05D004092 7.0e-06 56.2 125 32.0
HPP92_015481 Vanilla planifolia HOM05D043147 ORTHO05D007873 7.0e-06 56.2 141 34.0
Potri.012G141300 Populus trichocarpa HOM05D004189 ORTHO05D004092 9.1e-06 55.8 101 38.6


User provided reference genes

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