Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 5.4e-75 284.3 146 100.0
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 7.4e-40 167.5 146 63.7
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 1.6e-39 166.4 146 66.4
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 8.2e-39 164.1 146 63.7
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 1.1e-38 163.7 148 64.2
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 1.4e-38 163.3 146 63.7
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 1.8e-38 162.9 145 62.1
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 4.1e-38 161.8 146 61.6
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 9.0e-38 160.6 146 62.3
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 2.0e-37 159.5 147 61.9
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 2.6e-37 159.1 135 61.5
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 3.4e-37 158.7 147 61.2
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 4.5e-37 158.3 146 58.2
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 7.7e-37 157.5 90 84.4
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 7.7e-37 157.5 135 60.7
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 1.3e-36 156.8 141 63.1
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 1.3e-36 156.8 100 75.0
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 2.2e-36 156.0 141 63.1
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 3.8e-36 155.2 149 61.1
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 3.8e-36 155.2 149 61.1
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 5.0e-36 154.8 99 76.8
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 5.0e-36 154.8 141 66.7
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 5.0e-36 154.8 146 58.9
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 5.0e-36 154.8 146 58.9
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 6.5e-36 154.5 146 60.3
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 8.5e-36 154.1 90 82.2
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 8.5e-36 154.1 116 69.8
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 8.5e-36 154.1 149 58.4
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 1.1e-35 153.7 147 59.2
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 1.1e-35 153.7 147 59.9
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 1.4e-35 153.3 96 78.1
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 1.4e-35 153.3 147 59.9
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 1.9e-35 152.9 112 66.1
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 2.5e-35 152.5 147 58.5
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 2.5e-35 152.5 94 80.9
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 2.5e-35 152.5 135 58.5
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 2.5e-35 152.5 115 67.0
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 3.2e-35 152.1 147 60.5
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 3.2e-35 152.1 114 68.4
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 4.2e-35 151.8 118 66.1
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 5.5e-35 151.4 90 80.0
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 5.5e-35 151.4 113 67.3
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 7.2e-35 151.0 119 65.5
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 9.4e-35 150.6 96 79.2
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 1.6e-34 149.8 147 56.5
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.6e-34 149.8 112 67.9
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 1.6e-34 149.8 146 58.2
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 1.6e-34 149.8 93 81.7
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 2.1e-34 149.4 95 74.7
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 2.1e-34 149.4 100 76.0
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 2.1e-34 149.4 93 79.6
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 2.7e-34 149.1 94 75.5
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 2.7e-34 149.1 98 71.4
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 2.7e-34 149.1 146 58.2
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 3.6e-34 148.7 149 58.4
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 3.6e-34 148.7 95 78.9
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 4.6e-34 148.3 97 74.2
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 4.6e-34 148.3 112 67.0
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 4.6e-34 148.3 112 67.0
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 4.6e-34 148.3 100 76.0
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 4.6e-34 148.3 135 57.8
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 6.1e-34 147.9 86 82.6
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 6.1e-34 147.9 91 79.1
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 6.1e-34 147.9 96 79.2
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 7.9e-34 147.5 164 54.3
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 1.0e-33 147.1 115 68.7
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 1.0e-33 147.1 88 80.7
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 1.4e-33 146.7 92 75.0
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 1.4e-33 146.7 93 78.5
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 1.4e-33 146.7 109 69.7
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 2.3e-33 146.0 132 62.1
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 3.0e-33 145.6 112 66.1
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 3.9e-33 145.2 93 75.3
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 3.9e-33 145.2 93 76.3
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 5.1e-33 144.8 92 79.3
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 6.7e-33 144.4 89 78.7
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 1.1e-32 143.7 87 80.5
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 1.1e-32 143.7 93 75.3
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 1.1e-32 143.7 91 76.9
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 1.5e-32 143.3 146 52.7
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 1.5e-32 143.3 96 72.9
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 1.9e-32 142.9 92 75.0
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 1.9e-32 142.9 92 75.0
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 1.9e-32 142.9 92 75.0
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 1.9e-32 142.9 92 75.0
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 2.5e-32 142.5 103 68.9
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 2.5e-32 142.5 142 55.6
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 3.3e-32 142.1 84 78.6
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 3.3e-32 142.1 87 79.3
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 3.3e-32 142.1 144 58.3
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 5.7e-32 141.4 135 60.0
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 4.8e-31 138.3 94 73.4
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 6.3e-31 137.9 84 73.8
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 8.2e-31 137.5 87 72.4
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 1.1e-30 137.1 88 75.0
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 2.4e-30 136.0 81 80.2
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 3.1e-30 135.6 109 63.3
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 6.9e-30 134.4 82 79.3
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 1.5e-29 133.3 81 77.8
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 2.0e-29 132.9 83 77.1
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 1.9e-27 126.3 146 50.0
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 7.2e-27 124.4 89 69.7
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 7.7e-21 104.4 86 65.1
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 5.2e-17 91.7 46 89.1
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 6.7e-17 91.3 88 56.8
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 8.8e-09 64.3 50 60.0
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 1.3e-07 60.5 47 59.6


User provided reference genes

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