Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13335 Nelumbo nucifera HOM05D001122 ORTHO05D001877 3.2e-101 371.7 183 100.0
Nn2g11099 Nelumbo nucifera HOM05D001122 ORTHO05D001877 1.1e-13 80.9 96 53.1
TAR629G1123 Trochodendron aralioides HOM05D001122 ORTHO05D001877 3.4e-10 69.3 39 82.1
TAR636G1426 Trochodendron aralioides HOM05D001122 ORTHO05D001877 3.4e-10 69.3 39 82.1
TAR623G0962 Trochodendron aralioides HOM05D001122 ORTHO05D001877 8.5e-09 64.7 94 44.7
TAR623G1430 Trochodendron aralioides HOM05D001122 ORTHO05D001877 8.5e-09 64.7 94 44.7
Duzib128G1015 Durio zibethinus HOM05D001122 ORTHO05D001877 1.6e-07 60.5 66 51.5
CiPaw.09G218300 Carya illinoinensis HOM05D001122 ORTHO05D001877 2.1e-07 60.1 79 45.6
TPR.G31629 Trifolium pratense HOM05D001122 ORTHO05D001877 2.1e-07 60.1 44 65.9
CsaV3_UNG107770 Cucumis sativus L. HOM05D001122 ORTHO05D001877 3.6e-07 59.3 42 64.3
Hma1.2p1_1052F.1_g252360 Hydrangea macrophylla HOM05D001122 ORTHO05D001877 4.6e-07 58.9 73 52.1
Ca_15188_v3 Cicer arietinum L. HOM05D001122 ORTHO05D001877 6.1e-07 58.5 39 69.2
Gohir.A06G176200 Gossypium hirsutum HOM05D001122 ORTHO05D001877 6.1e-07 58.5 35 77.1
Gohir.D06G185800 Gossypium hirsutum HOM05D001122 ORTHO05D001877 6.1e-07 58.5 35 77.1
Gorai.010G217900 Gossypium raimondii HOM05D001122 ORTHO05D001877 6.1e-07 58.5 35 77.1
Manes.07G138300 Manihot esculenta HOM05D001122 ORTHO05D001877 7.9e-07 58.2 48 58.3
CsaV3_4G027030 Cucumis sativus L. HOM05D001122 ORTHO05D001877 1.0e-06 57.8 32 81.2
Manes.09G115600 Manihot esculenta HOM05D001122 ORTHO05D001877 1.0e-06 57.8 45 62.2
MELO3C026053.2 Cucumis melo HOM05D001122 ORTHO05D001877 1.4e-06 57.4 31 83.9
Medtr3g072350 Medicago truncatula HOM05D001122 ORTHO05D001877 1.4e-06 57.4 39 66.7
CANSAT35G1567 Cannabis sativa HOM05D001122 ORTHO05D001877 1.8e-06 57.0 91 42.9
Psat5g131480 Pisum sativum HOM05D001122 ORTHO05D001877 1.8e-06 57.0 43 62.8
Sc02g0000820 Simmondsia chinensis HOM05D001122 ORTHO05D001877 1.8e-06 57.0 49 57.1
Thecc.10G175000 Theobroma cacao HOM05D001122 ORTHO05D001877 1.8e-06 57.0 66 48.5
ClCG04G006480 Citrullus lanatus HOM05D001122 ORTHO05D001877 2.3e-06 56.6 33 75.8
Haze_21139 Corylus avellana HOM05D001122 ORTHO05D001877 2.3e-06 56.6 70 51.4
Haze_21145 Corylus avellana HOM05D001122 ORTHO05D001877 2.3e-06 56.6 70 51.4
PGR031G0394 Punica granatum HOM05D001122 ORTHO05D001877 2.3e-06 56.6 55 56.4
Sed0001794 Sechium edule HOM05D001122 ORTHO05D001877 2.3e-06 56.6 36 66.7
Cfa017062 Carpinus fangiana HOM05D001122 ORTHO05D001877 3.0e-06 56.2 70 51.4
Migut.F01261 Erythranthe guttata HOM05D001122 ORTHO05D001877 3.9e-06 55.8 43 62.8
Eucgr.A00686 Eucalyptus grandis HOM05D001122 ORTHO05D001877 3.9e-06 55.8 41 65.9
Hund03744 Selenicereus undatus HOM05D001122 ORTHO05D001877 3.9e-06 55.8 34 70.6
Aqoxy2G00742 Aquilegia oxysepala HOM05D001122 ORTHO05D001877 5.1e-06 55.5 75 42.7
Dinv25307 Davidia involucrata HOM05D001122 ORTHO05D001877 5.1e-06 55.5 99 39.4
Lj6g0018919 Lotus japonicus HOM05D001122 ORTHO05D001877 5.1e-06 55.5 60 50.0
MSTRG.8901 Avicennia marina HOM05D001122 ORTHO05D001877 6.7e-06 55.1 44 61.4
CiPaw.10G163900 Carya illinoinensis HOM05D001122 ORTHO05D001877 6.7e-06 55.1 77 46.8
Ca_07747_v3 Cicer arietinum L. HOM05D001122 ORTHO05D001877 6.7e-06 55.1 38 65.8
HanXRQChr10g0298251 Helianthus annuus HOM05D001122 ORTHO05D001877 6.7e-06 55.1 44 59.1
Medtr7g072550 Medicago truncatula HOM05D001122 ORTHO05D001877 6.7e-06 55.1 42 59.5
QL07p032789 Quercus lobata HOM05D001122 ORTHO05D001877 6.7e-06 55.1 32 78.1
Haze_17333 Corylus avellana HOM05D001122 ORTHO05D001877 8.8e-06 54.7 96 40.6
CsaV3_6G002220 Cucumis sativus L. HOM05D001122 ORTHO05D001877 8.8e-06 54.7 36 69.4


User provided reference genes

Program Settings