Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 5.8e-166 587.4 281 100.0
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 2.5e-116 422.5 281 70.8
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 4.8e-112 408.3 260 68.8
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 6.3e-112 407.9 285 67.0
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 1.4e-111 406.8 281 67.3
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 1.4e-111 406.8 254 74.4
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 3.1e-111 405.6 281 64.1
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 2.0e-110 402.9 261 70.9
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 1.3e-109 400.2 276 65.6
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 8.5e-109 397.5 281 65.5
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 1.4e-108 396.7 281 65.8
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 2.5e-108 396.0 270 66.7
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 7.2e-108 394.4 282 66.7
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 9.3e-108 394.0 283 65.7
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 1.0e-106 390.6 281 65.1
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 1.8e-106 389.8 275 66.2
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 1.3e-104 383.6 252 65.9
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 1.6e-104 383.3 275 62.5
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 2.8e-104 382.5 293 61.4
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 6.3e-104 381.3 271 66.1
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 1.4e-103 380.2 293 61.1
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 6.9e-103 377.9 281 65.1
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 1.5e-102 376.7 278 63.3
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 3.4e-102 375.6 255 67.1
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 4.5e-102 375.2 256 66.4
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 3.8e-101 372.1 277 62.1
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 8.5e-101 370.9 270 63.3
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 1.1e-100 370.5 306 61.4
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 1.4e-100 370.2 277 61.7
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 3.2e-100 369.0 273 65.2
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 7.2e-100 367.9 252 63.5
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 1.2e-99 367.1 273 60.8
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 2.1e-99 366.3 262 63.0
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 7.9e-99 364.4 278 62.2
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 5.1e-98 361.7 288 60.4
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 6.7e-98 361.3 344 53.5
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 8.8e-98 360.9 272 59.9
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 1.3e-96 357.1 282 61.3
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 1.7e-96 356.7 270 63.0
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 3.7e-96 355.5 270 62.2
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 4.8e-96 355.1 267 61.0
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 6.3e-96 354.8 332 54.8
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 8.2e-96 354.4 279 59.5
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 1.1e-95 354.0 283 60.1
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 2.4e-95 352.8 252 63.5
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 2.4e-95 352.8 281 60.1
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 3.1e-95 352.4 274 59.1
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 1.2e-94 350.5 270 60.7
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 2.6e-94 349.4 282 59.9
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 1.3e-93 347.1 269 59.9
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 6.5e-93 344.7 270 60.4
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 1.1e-92 344.0 271 58.7
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 4.2e-92 342.0 270 60.7
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 5.5e-92 341.7 272 57.7
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 1.2e-91 340.5 232 69.0
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 1.6e-91 340.1 274 57.3
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 2.1e-91 339.7 270 57.4
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 2.7e-91 339.3 288 56.6
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 1.8e-90 336.7 276 57.2
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 1.8e-90 336.7 244 61.1
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 2.3e-90 336.3 256 58.6
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 3.0e-90 335.9 271 56.1
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 1.5e-89 333.6 249 59.8
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 4.4e-89 332.0 327 48.6
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 5.7e-89 331.6 254 58.7
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 9.7e-89 330.9 257 59.1
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 2.2e-88 329.7 273 56.8
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 2.8e-88 329.3 292 56.2
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 1.4e-87 327.0 255 58.4
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.4e-87 327.0 272 58.5
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 4.1e-87 325.5 266 54.9
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 5.3e-87 325.1 269 55.4
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 3.5e-86 322.4 279 57.3
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 4.5e-86 322.0 350 46.3
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 1.9e-84 316.6 271 54.6
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 2.5e-84 316.2 262 55.7
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 2.7e-83 312.8 255 56.5
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 1.2e-81 307.4 257 56.4
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 2.0e-81 306.6 233 58.4
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 1.7e-80 303.5 207 67.6
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 3.7e-80 302.4 302 48.3
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 1.4e-79 300.4 232 58.6
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 1.2e-78 297.4 207 66.2
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 3.5e-78 295.8 207 65.7
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 1.0e-77 294.3 278 52.2
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 3.8e-77 292.4 202 65.3
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 1.1e-76 290.8 200 64.5
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 1.9e-76 290.0 264 52.3
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 3.2e-76 289.3 202 64.4
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 9.4e-76 287.7 200 63.0
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 1.2e-75 287.3 245 55.1
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 1.2e-75 287.3 202 65.8
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 2.6e-73 279.6 219 59.4
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 2.6e-73 279.6 350 43.7
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 3.4e-73 279.3 280 49.6
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 5.7e-73 278.5 269 50.9
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 7.5e-73 278.1 334 44.6
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 3.7e-72 275.8 193 65.3
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 2.0e-70 270.0 210 59.0
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 2.3e-69 266.5 204 57.4
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 1.1e-68 264.2 188 69.7
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 1.7e-61 240.4 209 55.5
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 5.0e-61 238.8 183 58.5
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 9.5e-60 234.6 186 56.5
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 3.0e-58 229.6 263 43.0
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 4.9e-56 222.2 252 44.8
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 1.1e-55 221.1 241 43.2
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 1.8e-50 203.8 269 37.9
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 2.9e-48 196.4 140 67.9
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 5.0e-45 185.7 187 51.3
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 4.7e-35 152.5 181 40.3
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 2.1e-30 137.1 128 50.8
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 6.0e-30 135.6 152 52.0
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 5.1e-29 132.5 176 39.2
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 4.4e-25 119.4 163 39.9
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 2.1e-22 110.5 93 61.3
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 5.6e-20 102.4 242 29.8
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 4.9e-16 89.4 69 50.7
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 7.4e-12 75.5 56 57.1
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 1.5e-09 67.8 73 47.9


User provided reference genes

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