Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13175 Nelumbo nucifera HOM05D042593 ORTHO05D277755 6.3e-68 260.8 144 100.0
Nn8g39494 Nelumbo nucifera HOM05D000178 ORTHO05D001740 3.7e-44 181.8 98 89.8
Nn1g06412 Nelumbo nucifera HOM05D000178 ORTHO05D001740 4.0e-38 161.8 133 66.2
Nn2g12381 Nelumbo nucifera HOM05D042593 ORTHO05D272158 8.1e-31 137.5 113 67.3
TAR636G2189 Trochodendron aralioides HOM05D000178 ORTHO05D001740 3.4e-21 105.5 144 52.8
Dinv30131 Davidia involucrata HOM05D000178 ORTHO05D001740 1.4e-19 100.1 135 45.9
TAR625G0810 Trochodendron aralioides HOM05D000178 ORTHO05D001740 3.9e-17 92.0 140 43.6
GSVIVG01035863001 Vitis vinifera HOM05D000178 ORTHO05D001740 6.6e-17 91.3 131 41.2
Aqoxy7G02276 Aquilegia oxysepala HOM05D000178 ORTHO05D001740 5.6e-16 88.2 132 37.9
Gohir.A13G181400 Gossypium hirsutum HOM05D000178 ORTHO05D001740 1.8e-14 83.2 132 40.2
Gohir.D13G189200 Gossypium hirsutum HOM05D000178 ORTHO05D001740 6.9e-14 81.3 131 39.7
A03p61310 Brassica napus HOM05D000178 ORTHO05D001740 1.2e-13 80.5 126 39.7
BraA03t15175Z Brassica rapa HOM05D000178 ORTHO05D001740 1.2e-13 80.5 126 39.7
Hma1.2p1_0243F.1_g100830 Hydrangea macrophylla HOM05D000178 ORTHO05D001740 1.2e-13 80.5 135 45.2
Nitab4.5_0000441g0010 Nicotiana tabacum HOM05D000178 ORTHO05D001740 1.2e-13 80.5 129 40.3
Cfa013142 Carpinus fangiana HOM05D000178 ORTHO05D001740 2.0e-13 79.7 134 40.3
Gorai.013G214700 Gossypium raimondii HOM05D000178 ORTHO05D001740 2.0e-13 79.7 131 39.7
C07p59150 Brassica napus HOM05D000178 ORTHO05D001740 2.6e-13 79.3 126 41.3
Carub.0007s0829 Capsella rubella HOM05D000178 ORTHO05D001740 3.4e-13 79.0 126 39.7
CARHR240190 Cardamine hirsuta HOM05D000178 ORTHO05D001740 3.4e-13 79.0 126 38.1
BolC7t46366H Brassica oleracea HOM05D000178 ORTHO05D001740 4.5e-13 78.6 126 40.5
FAN27G2979 Fragaria x ananassa HOM05D000178 ORTHO05D001740 5.8e-13 78.2 128 39.8
AL7G19550 Arabidopsis lyrata HOM05D000178 ORTHO05D001740 7.6e-13 77.8 126 40.5
Sp7g30050 Schrenkiella parvula HOM05D000178 ORTHO05D001740 7.6e-13 77.8 126 39.7
Thhalv10025453m.g Eutrema salsugineum HOM05D000178 ORTHO05D001740 9.9e-13 77.4 126 40.5
BcaNung03581 Brassica carinata HOM05D000178 ORTHO05D001740 1.3e-12 77.0 126 40.5
Nn2g12074 Nelumbo nucifera HOM05D000178 ORTHO05D001740 1.7e-12 76.6 53 62.3
MD00G1144500 Malus domestica HOM05D000178 ORTHO05D001740 2.2e-12 76.3 128 35.2
Aa31sc201G30 Aethionema arabicum HOM05D000178 ORTHO05D001740 4.9e-12 75.1 132 40.2
FAN15G1772 Fragaria x ananassa HOM05D000178 ORTHO05D001740 6.4e-12 74.7 128 39.1
RcHm_v2.0_Chr6g0297881 Rosa chinensis HOM05D000178 ORTHO05D001740 6.4e-12 74.7 122 39.3
TWI34G0973 Tripterygium wilfordii HOM05D000178 ORTHO05D001740 8.4e-12 74.3 133 42.1
CiPaw.08G011000 Carya illinoinensis HOM05D000178 ORTHO05D001740 1.1e-11 73.9 162 37.7
Gohir.A06G098400 Gossypium hirsutum HOM05D000178 ORTHO05D001740 1.1e-11 73.9 127 37.0
Thecc.09G024500 Theobroma cacao HOM05D000178 ORTHO05D001740 1.4e-11 73.6 132 38.6
CsaV3_2G032140 Cucumis sativus L. HOM05D000178 ORTHO05D001740 1.9e-11 73.2 127 40.9
HanXRQChr10g0294841 Helianthus annuus HOM05D000178 ORTHO05D001740 1.9e-11 73.2 141 36.2
Oeu029077.1 Olea europaea HOM05D000178 ORTHO05D001740 2.4e-11 72.8 149 37.6
AT4G32290 Arabidopsis thaliana HOM05D000178 ORTHO05D001740 3.2e-11 72.4 132 37.9
C01p06700 Brassica napus HOM05D000178 ORTHO05D001740 3.2e-11 72.4 126 37.3
ClCG08G013400 Citrullus lanatus HOM05D000178 ORTHO05D001740 3.2e-11 72.4 133 37.6
Oeu060154.1 Olea europaea HOM05D000178 ORTHO05D001740 7.1e-11 71.2 154 34.4
THA.LOC104799235 Tarenaya hassleriana HOM05D000178 ORTHO05D001740 7.1e-11 71.2 126 38.1
TWI63G1236 Tripterygium wilfordii HOM05D000178 ORTHO05D001740 7.1e-11 71.2 137 39.4
vmacro05175 Vaccinium macrocarpon HOM05D000178 ORTHO05D001740 9.3e-11 70.9 139 39.6
BcaC09g52011 Brassica carinata HOM05D000178 ORTHO05D001740 1.2e-10 70.5 126 36.5
BolC1t00663H Brassica oleracea HOM05D000178 ORTHO05D042993 1.2e-10 70.5 126 36.5
FAN20G0324 Fragaria x ananassa HOM05D000178 ORTHO05D001740 1.2e-10 70.5 77 51.9
Gorai.010G115500 Gossypium raimondii HOM05D000178 ORTHO05D001740 1.2e-10 70.5 127 36.2
Ciclev10010719m.g Citrus clementina HOM05D000178 ORTHO05D001740 2.1e-10 69.7 133 35.3
Rhsim02G0201400 Rhododendron simsii HOM05D000178 ORTHO05D001740 2.7e-10 69.3 127 36.2
Haze_21515 Corylus avellana HOM05D000178 ORTHO05D001740 3.5e-10 68.9 138 36.2
Lalb_Chr11g0063701 Lupinus albus HOM05D000178 ORTHO05D001740 3.5e-10 68.9 147 34.7
ECA234G0354 Erigeron canadensis HOM05D000178 ORTHO05D001740 4.6e-10 68.6 143 33.6
CANSAT25G0783 Cannabis sativa HOM05D000178 ORTHO05D001740 6.0e-10 68.2 141 44.7
Migut.A00040 Erythranthe guttata HOM05D000178 ORTHO05D001740 6.0e-10 68.2 141 36.9
EL10Ac2g04234 Beta vulgaris HOM05D000178 ORTHO05D001740 1.3e-09 67.0 136 32.4
Gohir.D06G100500 Gossypium hirsutum HOM05D000178 ORTHO05D001740 1.3e-09 67.0 127 34.6
Lsat_1_v5_gn_5_109580 Lactuca sativa HOM05D000178 ORTHO05D001740 1.3e-09 67.0 45 64.4
PSO170G2042 Papaver somniferum HOM05D000178 ORTHO05D001740 1.3e-09 67.0 58 55.2
SGA_v2.0_scaffold20G09124 Striga asiatica HOM05D000178 ORTHO05D001740 3.0e-09 65.9 127 34.6
Peaxi162Scf00058g00281 Petunia axillaris HOM05D000178 ORTHO05D001740 3.9e-09 65.5 130 37.7
Cc08_g00590 Coffea canephora HOM05D000178 ORTHO05D001740 5.1e-09 65.1 129 38.0
Prupe.1G481400 Prunus persica HOM05D000178 ORTHO05D001740 5.1e-09 65.1 121 35.5
Prupe.7G026200 Prunus persica HOM05D000178 ORTHO05D001740 5.1e-09 65.1 132 35.6
CSS0002806 Camellia sinensis var. sinensis HOM05D000178 ORTHO05D001740 8.7e-09 64.3 142 38.7
Duzib168G2046 Durio zibethinus HOM05D000178 ORTHO05D001740 8.7e-09 64.3 57 52.6
COL.COLO4_18862 Corchorus olitorius HOM05D000178 ORTHO05D001740 1.1e-08 63.9 127 44.9
FvH4_2g29000 Fragaria vesca HOM05D000178 ORTHO05D001740 1.5e-08 63.5 80 48.8
Glyma.14G116300 Glycine max HOM05D000178 ORTHO05D001740 1.9e-08 63.2 152 32.2
arahy.Tifrunner.gnm1.ann1.UJP5WC Arachis hypogaea HOM05D000178 ORTHO05D001740 3.3e-08 62.4 138 32.6
vmacro11177 Vaccinium macrocarpon HOM05D000178 ORTHO05D001740 4.3e-08 62.0 64 54.7
Cpa.g.sc954.2 Carica papaya HOM05D000178 ORTHO05D001740 5.6e-08 61.6 134 36.6
Sc23g0006720 Simmondsia chinensis HOM05D000178 ORTHO05D001740 5.6e-08 61.6 52 50.0
PSO782G0114 Papaver somniferum HOM05D000178 ORTHO05D001740 7.4e-08 61.2 66 47.0
AL6G37060 Arabidopsis lyrata HOM05D000178 ORTHO05D001740 9.6e-08 60.8 128 34.4
DCAR_006215 Daucus carota HOM05D000178 ORTHO05D001740 9.6e-08 60.8 137 34.3
Sed0006407 Sechium edule HOM05D000178 ORTHO05D001740 9.6e-08 60.8 127 37.8
AT5G25330 Arabidopsis thaliana HOM05D000178 ORTHO05D001740 2.1e-07 59.7 128 34.4
arahy.Tifrunner.gnm1.ann1.03B6QV Arachis hypogaea HOM05D000178 ORTHO05D001740 2.1e-07 59.7 127 33.9
BcaNung03215 Brassica carinata HOM05D000178 ORTHO05D001740 2.1e-07 59.7 66 53.0
BraA01t00572Z Brassica rapa HOM05D000178 ORTHO05D042993 4.8e-07 58.5 120 33.3
FAN24G3343 Fragaria x ananassa HOM05D000178 ORTHO05D001740 6.2e-07 58.2 83 45.8
MBI11_g02025_MAGBIO Magnolia biondii HOM05D000178 ORTHO05D001740 6.2e-07 58.2 64 48.4
RhsimUnG0073700 Rhododendron simsii HOM05D000178 ORTHO05D001740 8.1e-07 57.8 46 52.2
PSO135G0235 Papaver somniferum HOM05D000178 ORTHO05D001740 1.1e-06 57.4 52 50.0
PSO384G4324 Papaver somniferum HOM05D000178 ORTHO05D001740 1.1e-06 57.4 71 42.3
SGA_v2.0_scaffold64G21936 Striga asiatica HOM05D000178 ORTHO05D001740 1.1e-06 57.4 46 58.7
Lj1g0023386 Lotus japonicus HOM05D000178 ORTHO05D001740 1.4e-06 57.0 132 43.9
Rhsim07G0200000 Rhododendron simsii HOM05D000178 ORTHO05D001740 1.4e-06 57.0 46 52.2
BcaNung02273 Brassica carinata HOM05D000178 ORTHO05D001740 1.8e-06 56.6 50 60.0
BcaNung02276 Brassica carinata HOM05D000178 ORTHO05D001740 1.8e-06 56.6 50 60.0
C07p42510 Brassica napus HOM05D000178 ORTHO05D001740 1.8e-06 56.6 50 60.0
BolC7t44780H Brassica oleracea HOM05D000178 ORTHO05D001740 1.8e-06 56.6 50 60.0
CARHR041930 Cardamine hirsuta HOM05D000178 ORTHO05D000229 2.4e-06 56.2 88 36.4
Carub.0006s2315 Capsella rubella HOM05D000178 ORTHO05D001740 3.1e-06 55.8 132 34.1
Ah.16g104390 Amaranthus hybridus HOM05D000178 ORTHO05D001740 4.0e-06 55.5 168 29.8
arahy.Tifrunner.gnm1.ann1.1G7GSU Arachis hypogaea HOM05D000178 ORTHO05D001740 4.0e-06 55.5 43 60.5
SalBow4G1492 Salvia bowleyana HOM05D000178 ORTHO05D001740 4.0e-06 55.5 135 39.3
TWI31G0089 Tripterygium wilfordii HOM05D000178 ORTHO05D001740 4.0e-06 55.5 67 49.3
Lsat_1_v5_gn_2_35301 Lactuca sativa HOM05D000178 ORTHO05D001740 5.3e-06 55.1 78 43.6
vmacro11176 Vaccinium macrocarpon HOM05D000178 ORTHO05D001740 6.9e-06 54.7 137 39.4
A06p36070 Brassica napus HOM05D000178 ORTHO05D001740 9.0e-06 54.3 51 56.9
BraA06t26528Z Brassica rapa HOM05D000178 ORTHO05D001740 9.0e-06 54.3 51 56.9
Glyma.17G211400 Glycine max HOM05D000178 ORTHO05D001740 9.0e-06 54.3 157 30.6
HanXRQChr03g0091171 Helianthus annuus HOM05D000178 ORTHO05D001740 9.0e-06 54.3 60 48.3


User provided reference genes

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