Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13162 Nelumbo nucifera HOM05D007530 ORTHO05D009556 1.5e-30 135.6 72 100.0
Potri.006G101901 Populus trichocarpa HOM05D007530 ORTHO05D009556 6.2e-24 113.6 71 78.9
GSVIVG01011181001 Vitis vinifera HOM05D007530 ORTHO05D009556 2.4e-23 111.7 72 80.6
Manes.08G093800 Manihot esculenta HOM05D007530 ORTHO05D009556 3.1e-23 111.3 71 77.5
Manes.09G107300 Manihot esculenta HOM05D007530 ORTHO05D009556 5.3e-23 110.5 71 77.5
TAR623G0260 Trochodendron aralioides HOM05D007530 ORTHO05D009556 6.9e-23 110.2 72 79.2
Potri.016G118800 Populus trichocarpa HOM05D007530 ORTHO05D009556 1.5e-22 109.0 71 77.5
CANSAT35G1517 Cannabis sativa HOM05D007530 ORTHO05D009556 3.4e-22 107.8 70 74.3
Ca_07655_v3 Cicer arietinum L. HOM05D007530 ORTHO05D009556 7.6e-22 106.7 72 77.8
Glyma.16G098900 Glycine max HOM05D007530 ORTHO05D009556 7.6e-22 106.7 73 78.1
Duzib106G1059 Durio zibethinus HOM05D007530 ORTHO05D009556 1.0e-21 106.3 72 79.2
Rhsim05G0217200 Rhododendron simsii HOM05D000043 ORTHO05D005398 1.0e-21 106.3 68 79.4
arahy.Tifrunner.gnm1.ann1.88RA0A Arachis hypogaea HOM05D007530 ORTHO05D009556 1.3e-21 105.9 68 76.5
Duzib093G1475 Durio zibethinus HOM05D007530 ORTHO05D009556 2.2e-21 105.1 72 77.8
Sabra06G0078200 Salix brachista HOM05D007530 ORTHO05D009556 2.2e-21 105.1 66 75.8
Sed0024664 Sechium edule HOM05D007530 ORTHO05D009556 2.2e-21 105.1 72 76.4
Glyma.18G203200 Glycine max HOM05D007530 ORTHO05D009556 2.9e-21 104.8 73 75.3
MBI15_g24380_MAGBIO Magnolia biondii HOM05D007530 ORTHO05D009556 3.8e-21 104.4 72 72.2
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 5.0e-21 104.0 69 75.4
Glyma.07G152100 Glycine max HOM05D007530 ORTHO05D009556 5.0e-21 104.0 73 76.7
Hma1.2p1_0362F.1_g136440 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 5.0e-21 104.0 64 79.7
CiPaw.10G157500 Carya illinoinensis HOM05D007530 ORTHO05D009556 6.5e-21 103.6 72 73.6
arahy.Tifrunner.gnm1.ann1.ZMF41F Arachis hypogaea HOM05D007530 ORTHO05D009556 8.4e-21 103.2 68 75.0
Sopen10g034690 Solanum pennellii HOM05D007530 ORTHO05D009556 1.4e-20 102.4 70 74.3
Gohir.A04G092400 Gossypium hirsutum HOM05D007530 ORTHO05D009556 1.9e-20 102.1 65 78.5
Gohir.D04G131700 Gossypium hirsutum HOM05D007530 ORTHO05D009556 1.9e-20 102.1 65 78.5
Phvul.008G096700 Phaseolus vulgaris HOM05D007530 ORTHO05D009556 1.9e-20 102.1 70 75.7
Thecc.05G013400 Theobroma cacao HOM05D007530 ORTHO05D009556 1.9e-20 102.1 70 72.9
arahy.Tifrunner.gnm1.ann1.R0LR40 Arachis hypogaea HOM05D007530 ORTHO05D009556 3.2e-20 101.3 66 75.8
CSS0025168 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 3.2e-20 101.3 66 75.8
Solyc10g085215.1 Solanum lycopersicum HOM05D007530 ORTHO05D009556 3.2e-20 101.3 70 72.9
ClCG10G022290 Citrullus lanatus HOM05D007530 ORTHO05D009556 5.5e-20 100.5 66 74.2
Psat3g126880 Pisum sativum HOM05D007530 ORTHO05D009556 5.5e-20 100.5 72 73.6
Gorai.012G115500 Gossypium raimondii HOM05D007530 ORTHO05D009556 7.1e-20 100.1 68 75.0
Nitab4.5_0000770g0040 Nicotiana tabacum HOM05D007530 ORTHO05D009556 7.1e-20 100.1 64 76.6
Nitab4.5_0003514g0010 Nicotiana tabacum HOM05D007530 ORTHO05D009556 7.1e-20 100.1 70 72.9
PGSC0003DMG400011024 Solanum tuberosum HOM05D007530 ORTHO05D009556 7.1e-20 100.1 70 72.9
Nitab4.5_0004107g0030 Nicotiana tabacum HOM05D007530 ORTHO05D009556 1.2e-19 99.4 64 76.6
CsaV3_3G033590 Cucumis sativus L. HOM05D007530 ORTHO05D009556 1.6e-19 99.0 72 70.8
THA.LOC109117252 Tarenaya hassleriana HOM05D007530 ORTHO05D009556 1.6e-19 99.0 72 68.1
unitig_37.g12653 Utricularia gibba HOM05D007530 ORTHO05D009556 2.7e-19 98.2 71 69.0
Aa31LG5G18900 Aethionema arabicum HOM05D007530 ORTHO05D009556 3.5e-19 97.8 72 70.8
Migut.L02025 Erythranthe guttata HOM05D007530 ORTHO05D009556 3.5e-19 97.8 70 71.4
Medtr7g068940 Medicago truncatula HOM05D007530 ORTHO05D009556 3.5e-19 97.8 71 70.4
Nitab4.5_0000444g0050 Nicotiana tabacum HOM05D007530 ORTHO05D009556 3.5e-19 97.8 70 71.4
Aa31LG1G23010 Aethionema arabicum HOM05D007530 ORTHO05D009556 6.1e-19 97.1 72 72.2
Lalb_Chr01g0023151 Lupinus albus HOM05D007530 ORTHO05D009556 1.0e-18 96.3 67 70.1
PGR142G0763 Punica granatum HOM05D007530 ORTHO05D009556 1.0e-18 96.3 72 65.3
Hund10987 Selenicereus undatus HOM05D007530 ORTHO05D009556 1.3e-18 95.9 72 69.4
MELO3C009149.2 Cucumis melo HOM05D007530 ORTHO05D009556 1.8e-18 95.5 72 68.1
SalBow4G2966 Salvia bowleyana HOM05D007530 ORTHO05D009556 3.9e-18 94.4 70 70.0
Sc01g0006890 Simmondsia chinensis HOM05D007530 ORTHO05D009556 3.9e-18 94.4 72 62.5
Prupe.6G279800 Prunus persica HOM05D007530 ORTHO05D009556 8.7e-18 93.2 73 67.1
PGSC0003DMG400019174 Solanum tuberosum HOM05D007530 ORTHO05D009556 1.1e-17 92.8 70 68.6
Carub.0006s0047 Capsella rubella HOM05D007530 ORTHO05D009556 1.9e-17 92.0 70 67.1
Thhalv10015199m.g Eutrema salsugineum HOM05D007530 ORTHO05D009556 2.5e-17 91.7 70 67.1
AT5G01350 Arabidopsis thaliana HOM05D007530 ORTHO05D009556 3.3e-17 91.3 67 67.2
CARHR211730 Cardamine hirsuta HOM05D007530 ORTHO05D009556 3.3e-17 91.3 67 68.7
PSO384G0267 Papaver somniferum HOM05D007530 ORTHO05D009556 3.3e-17 91.3 64 70.3
C03p00510 Brassica napus HOM05D000406 ORTHO05D006918 5.7e-17 90.5 68 67.6
BolC3t12617H Brassica oleracea HOM05D000406 ORTHO05D006918 5.7e-17 90.5 68 67.6
Sp6g40660 Schrenkiella parvula HOM05D007530 ORTHO05D009556 5.7e-17 90.5 67 68.7
AL6G10780 Arabidopsis lyrata HOM05D007530 ORTHO05D009556 9.7e-17 89.7 67 67.2
Lalb_Chr19g0124461 Lupinus albus HOM05D007530 ORTHO05D009556 9.7e-17 89.7 61 70.5
BcaB01g06225 Brassica carinata HOM05D007530 ORTHO05D009556 2.8e-16 88.2 67 67.2
TWI74G1090 Tripterygium wilfordii HOM05D007530 ORTHO05D009556 2.8e-16 88.2 67 64.2
EL10Ac5g12543 Beta vulgaris HOM05D007530 ORTHO05D009556 3.7e-16 87.8 72 61.1
A03p00350 Brassica napus HOM05D000406 ORTHO05D006918 3.7e-16 87.8 62 71.0
BraA03t09426Z Brassica rapa HOM05D000406 ORTHO05D006918 3.7e-16 87.8 62 71.0
COL.COLO4_14508 Corchorus olitorius HOM05D002620 ORTHO05D006469 3.7e-16 87.8 62 67.7
HPP92_021352 Vanilla planifolia HOM05D007530 ORTHO05D009556 3.7e-16 87.8 68 61.8
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 6.3e-16 87.0 88 55.7
MD12G1171600 Malus domestica HOM05D007530 ORTHO05D009556 8.2e-16 86.7 68 64.7
ECA247G1901 Erigeron canadensis HOM05D007530 ORTHO05D009556 1.1e-15 86.3 67 62.7
HanXRQChr10g0294071 Helianthus annuus HOM05D007530 ORTHO05D009556 1.1e-15 86.3 70 58.6
ATR0681G213 Amborella trichopoda HOM05D007530 ORTHO05D009556 4.1e-15 84.3 70 64.3
RcHm_v2.0_Chr3g0462691 Rosa chinensis HOM05D007530 ORTHO05D009556 5.3e-15 84.0 64 59.4
FAN05G2692 Fragaria x ananassa HOM05D007530 ORTHO05D009556 6.9e-15 83.6 62 59.7
Eucgr.G03069 Eucalyptus grandis HOM05D007530 ORTHO05D009556 1.2e-14 82.8 46 80.4
HPP92_021347 Vanilla planifolia HOM05D007530 ORTHO05D009556 1.5e-14 82.4 66 59.1
FvH4_6g11210 Fragaria vesca HOM05D007530 ORTHO05D009556 2.6e-14 81.6 64 56.2
FAN02G2108 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.6e-14 81.6 68 52.9
FAN09G3168 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.6e-14 81.6 64 56.2
FAN14G2496 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.6e-14 81.6 64 56.2
FAN14G3881 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.6e-14 81.6 64 56.2
Cc06_g01140 Coffea canephora HOM05D007530 ORTHO05D009556 5.9e-14 80.5 42 90.5
TPR.G2527 Trifolium pratense HOM05D007530 ORTHO05D009556 2.5e-12 75.1 69 63.8
Aqoxy2G00850 Aquilegia oxysepala HOM05D007530 ORTHO05D009556 4.2e-12 74.3 72 50.0
vmacro20294 Vaccinium macrocarpon HOM05D007530 ORTHO05D009556 6.7e-10 67.0 47 74.5
Mapoly0015s0144 Marchantia polymorpha HOM05D007530 ORTHO05D009556 8.8e-10 66.6 65 49.2
Zm00001eb426270 Zea mays HOM05D007530 ORTHO05D009556 2.5e-09 65.1 60 53.3
Lsat_1_v5_gn_9_35161 Lactuca sativa HOM05D007530 ORTHO05D009556 3.3e-09 64.7 49 59.2
Os04g0508100 Oryza sativa ssp. japonica HOM05D007530 ORTHO05D009556 4.3e-09 64.3 62 53.2
Pp3c21_22550 Physcomitrium patens HOM05D007530 ORTHO05D009556 9.7e-09 63.2 61 50.8
Cpa.g.sc11.95 Carica papaya HOM05D007530 ORTHO05D009556 1.3e-08 62.8 42 73.8
CSS0006801 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 2.8e-08 61.6 46 71.7
arahy.Tifrunner.gnm1.ann1.K2ZES1 Arachis hypogaea HOM05D008645 ORTHO05D009556 3.1e-07 58.2 42 69.0
CAN.G243.17 Capsicum annuum HOM05D007530 ORTHO05D009556 5.3e-07 57.4 47 61.7
Peaxi162Scf00014g00124 Petunia axillaris HOM05D007530 ORTHO05D009556 5.3e-07 57.4 47 61.7
Lj1g0004890 Lotus japonicus HOM05D007530 ORTHO05D009556 9.1e-07 56.6 44 61.4
Sabra16G0114900 Salix brachista HOM05D007530 ORTHO05D000135 9.1e-07 56.6 52 63.5
Hma1.2p1_0024F.1_g016010 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 1.2e-06 56.2 39 74.4
Oeu033582.2 Olea europaea HOM05D007530 ORTHO05D009556 1.5e-06 55.8 40 70.0
AagrBONN_evm.TU.Sc2ySwM_117.3278 Anthoceros agrestis HOM05D007530 ORTHO05D009556 2.0e-06 55.5 67 38.8
Zm00001eb077870 Zea mays HOM05D007530 ORTHO05D009556 4.5e-06 54.3 37 67.6
Peaxi162Scf00009g01523 Petunia axillaris HOM05D007530 ORTHO05D009556 5.9e-06 53.9 26 96.2


User provided reference genes

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