Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g12960 Nelumbo nucifera HOM05D007104 ORTHO05D008851 0.0e+00 1447.6 858 100.0
TAR633G1446 Trochodendron aralioides HOM05D007104 ORTHO05D008851 2.2e-269 932.6 859 71.0
GSVIVG01025541001 Vitis vinifera HOM05D007104 ORTHO05D008851 1.2e-219 767.3 864 62.2
Hma1.2p1_0111F.1_g053700 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 5.0e-213 745.3 812 64.2
Thecc.05G052200 Theobroma cacao HOM05D007104 ORTHO05D008851 1.1e-207 727.6 842 61.5
Duzib128G0648 Durio zibethinus HOM05D007104 ORTHO05D008851 1.0e-205 721.1 869 59.8
Dinv35696 Davidia involucrata HOM05D007104 ORTHO05D008851 1.4e-202 710.7 856 61.0
CiPaw.09G181900 Carya illinoinensis HOM05D007104 ORTHO05D008851 1.4e-199 700.7 866 59.6
Manes.08G001800 Manihot esculenta HOM05D007104 ORTHO05D008851 5.4e-199 698.7 863 59.6
Gorai.009G420800 Gossypium raimondii HOM05D007104 ORTHO05D008851 3.0e-197 693.0 846 59.1
Ciclev10011055m.g Citrus clementina HOM05D007104 ORTHO05D008851 5.6e-196 688.7 842 59.3
Gohir.A04G077100 Gossypium hirsutum HOM05D007104 ORTHO05D008851 1.6e-195 687.2 849 58.9
Potri.006G132700 Populus trichocarpa HOM05D007104 ORTHO05D008851 6.2e-195 685.3 867 57.6
PSO339G1446 Papaver somniferum HOM05D007104 ORTHO05D008851 5.8e-193 678.7 809 61.2
RcHm_v2.0_Chr3g0468421 Rosa chinensis HOM05D007104 ORTHO05D008851 5.4e-191 672.2 857 58.8
FAN05G0960 Fragaria x ananassa HOM05D007104 ORTHO05D008851 1.3e-189 667.5 860 57.7
Actinidia05278 Actinidia chinensis HOM05D007104 ORTHO05D008851 2.3e-189 666.8 867 57.8
Haze_20670 Corylus avellana HOM05D007104 ORTHO05D008851 3.9e-189 666.0 888 57.0
FAN14G4814 Fragaria x ananassa HOM05D007104 ORTHO05D008851 3.9e-189 666.0 862 57.8
MD12G1126500 Malus domestica HOM05D007104 ORTHO05D008851 5.1e-189 665.6 870 57.4
ATR0594G196 Amborella trichopoda HOM05D007104 ORTHO05D008851 7.3e-188 661.8 866 54.5
PSO384G2670 Papaver somniferum HOM05D007104 ORTHO05D008851 7.3e-188 661.8 872 57.8
Sabra06G0104200 Salix brachista HOM05D007104 ORTHO05D008851 8.1e-187 658.3 874 56.4
QL07p045556 Quercus lobata HOM05D007104 ORTHO05D008851 1.8e-186 657.1 869 57.8
MBI05_g33311_MAGBIO Magnolia biondii HOM05D007104 ORTHO05D008851 5.8e-185 652.1 849 58.7
FvH4_6g15120 Fragaria vesca HOM05D007104 ORTHO05D008851 7.6e-185 651.7 862 57.2
Cfa017487 Carpinus fangiana HOM05D007104 ORTHO05D008851 6.4e-184 648.7 867 56.7
Peaxi162Scf00005g05111 Petunia axillaris HOM05D007104 ORTHO05D008851 1.2e-182 644.4 819 59.3
CSS0009185 Camellia sinensis var. sinensis HOM05D007104 ORTHO05D008851 3.5e-182 642.9 802 59.1
Prupe.6G243100 Prunus persica HOM05D007104 ORTHO05D008851 4.6e-182 642.5 866 56.6
Nitab4.5_0006316g0040 Nicotiana tabacum HOM05D007104 ORTHO05D008851 1.3e-179 634.4 866 55.1
Sed0027238 Sechium edule HOM05D007104 ORTHO05D008851 5.3e-178 629.0 846 56.0
Cc06_g03420 Coffea canephora HOM05D007104 ORTHO05D008851 4.5e-177 625.9 869 56.0
EL10Ac7g17325 Beta vulgaris HOM05D007104 ORTHO05D008851 2.2e-176 623.6 841 51.1
COL.COLO4_27102 Corchorus olitorius HOM05D007104 ORTHO05D008851 1.9e-175 620.5 713 62.8
Solyc09g007200.4 Solanum lycopersicum HOM05D007104 ORTHO05D008851 2.4e-175 620.2 865 55.0
Sopen09g002070 Solanum pennellii HOM05D007104 ORTHO05D008851 2.4e-175 620.2 865 55.0
DCAR_017721 Daucus carota HOM05D007104 ORTHO05D008851 1.3e-173 614.4 865 56.3
FAN09G1206 Fragaria x ananassa HOM05D007104 ORTHO05D008851 1.8e-173 614.0 860 55.9
Nitab4.5_0000848g0180 Nicotiana tabacum HOM05D007104 ORTHO05D008851 3.0e-173 613.2 866 49.3
Gohir.D04G116200 Gossypium hirsutum HOM05D007104 ORTHO05D008851 5.1e-173 612.5 722 61.5
Sp6g39750 Schrenkiella parvula HOM05D007104 ORTHO05D008851 1.1e-172 611.3 864 53.7
MSTRG.19128 Avicennia marina HOM05D007104 ORTHO05D008851 1.9e-172 610.5 851 55.6
Thhalv10012661m.g Eutrema salsugineum HOM05D007104 ORTHO05D008851 5.6e-172 609.0 793 51.7
AL6G12100 Arabidopsis lyrata HOM05D007104 ORTHO05D008851 1.6e-171 607.4 787 57.6
AT5G02830 Arabidopsis thaliana HOM05D007104 ORTHO05D008851 1.6e-171 607.4 844 55.6
BcaC06g32013 Brassica carinata HOM05D007104 ORTHO05D008851 1.6e-171 607.4 865 54.1
C09p73820 Brassica napus HOM05D007104 ORTHO05D008851 2.8e-171 606.7 836 54.7
BolC9t60116H Brassica oleracea HOM05D007104 ORTHO05D008851 2.8e-171 606.7 836 54.7
PGR004G2266 Punica granatum HOM05D007104 ORTHO05D008851 2.8e-171 606.7 787 56.3
SalBow3G1198 Salvia bowleyana HOM05D007104 ORTHO05D008851 2.8e-171 606.7 890 48.9
Sc01g0003660 Simmondsia chinensis HOM05D007104 ORTHO05D008851 1.1e-170 604.7 748 59.0
Glyma.19G177700 Glycine max HOM05D007104 ORTHO05D008851 2.4e-170 603.6 862 55.2
A10p32890 Brassica napus HOM05D007104 ORTHO05D008851 4.0e-170 602.8 867 54.1
BraA10t45326Z Brassica rapa HOM05D007104 ORTHO05D008851 4.0e-170 602.8 867 54.1
arahy.Tifrunner.gnm1.ann1.UD3AFU Arachis hypogaea HOM05D007104 ORTHO05D008851 5.3e-170 602.4 787 50.4
arahy.Tifrunner.gnm1.ann1.Z3T1FA Arachis hypogaea HOM05D007104 ORTHO05D008851 5.3e-170 602.4 787 50.4
Carub.0006s0163 Capsella rubella HOM05D007104 ORTHO05D008851 1.5e-169 600.9 872 53.9
vmacro08689 Vaccinium macrocarpon HOM05D007104 ORTHO05D008851 1.5e-169 600.9 782 57.9
Lj1g0014647 Lotus japonicus HOM05D007104 ORTHO05D008851 2.0e-169 600.5 831 55.8
TWI18G0316 Tripterygium wilfordii HOM05D007104 ORTHO05D008851 7.6e-169 598.6 838 56.2
Migut.J00404 Erythranthe guttata HOM05D007104 ORTHO05D008851 1.7e-168 597.4 855 53.3
Lsat_1_v5_gn_2_109900 Lactuca sativa HOM05D007104 ORTHO05D008851 2.9e-168 596.7 814 56.3
THA.LOC104826989 Tarenaya hassleriana HOM05D007104 ORTHO05D008851 6.5e-168 595.5 789 57.8
CANSAT80G1630 Cannabis sativa HOM05D007104 ORTHO05D008851 3.5e-166 589.7 865 54.6
AUR62040527 Chenopodium quinoa HOM05D007104 ORTHO05D008851 6.0e-166 589.0 838 49.8
Lalb_Chr20g0112911 Lupinus albus HOM05D007104 ORTHO05D008851 7.9e-166 588.6 766 57.3
HanXRQChr05g0129241 Helianthus annuus HOM05D007104 ORTHO05D008851 3.9e-165 586.3 809 55.6
Phvul.001G174000 Phaseolus vulgaris HOM05D007104 ORTHO05D008851 9.7e-164 581.6 860 53.5
CAN.G350.45 Capsicum annuum HOM05D007104 ORTHO05D008851 1.6e-163 580.9 770 57.9
CsaV3_4G024380 Cucumis sativus L. HOM05D007104 ORTHO05D008851 2.1e-163 580.5 859 53.9
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 2.1e-163 580.5 847 51.0
Aa31LG1G22070 Aethionema arabicum HOM05D007104 ORTHO05D008851 1.1e-162 578.2 877 46.2
Medtr7g100550 Medicago truncatula HOM05D007104 ORTHO05D008851 3.1e-162 576.6 797 56.1
Ca_08818_v3 Cicer arietinum L. HOM05D007104 ORTHO05D008851 5.0e-160 569.3 857 52.0
TPR.G36926 Trifolium pratense HOM05D007104 ORTHO05D008851 8.5e-160 568.5 812 52.8
Lj3C977G16 Lonicera japonica HOM05D007104 ORTHO05D008851 2.5e-159 567.0 824 52.8
MELO3C003069.2 Cucumis melo HOM05D007104 ORTHO05D008851 4.2e-159 566.2 872 45.9
Psat3g045920 Pisum sativum HOM05D007104 ORTHO05D008851 7.9e-158 562.0 740 58.1
ClCG04G008780 Citrullus lanatus HOM05D007104 ORTHO05D008851 3.3e-156 556.6 856 52.5
Hund12063 Selenicereus undatus HOM05D007104 ORTHO05D008851 1.6e-150 537.7 866 46.1
VMungo1383G0332 Vigna mungo HOM05D007104 ORTHO05D008851 5.7e-148 529.3 859 51.1
SGA_v2.0_scaffold126G33879 Striga asiatica HOM05D007104 ORTHO05D008851 1.0e-144 518.5 858 50.8
HPP92_003603 Vanilla planifolia HOM05D007104 ORTHO05D008851 5.2e-141 506.1 760 52.5
AUR62042917 Chenopodium quinoa HOM05D007104 ORTHO05D008851 1.3e-136 491.5 789 38.9
Os03g0284900 Oryza sativa ssp. japonica HOM05D007104 ORTHO05D008851 1.9e-135 487.6 821 43.6
SEGI_02163 Sequoiadendron giganteum HOM05D007104 ORTHO05D008851 1.2e-121 441.8 826 46.5
Eucgr.K03203 Eucalyptus grandis HOM05D007104 ORTHO05D008851 5.0e-120 436.4 594 61.3
Aqoxy2G01885 Aquilegia oxysepala HOM05D007104 ORTHO05D008851 1.6e-118 431.4 576 56.1
Glyma.03G177000 Glycine max HOM05D007104 ORTHO05D008851 1.4e-101 375.2 535 61.5
Pp3c22_3070 Physcomitrium patens HOM05D007104 ORTHO05D008851 3.3e-87 327.4 798 43.4
Zm00001eb397200 Zea mays HOM05D007104 ORTHO05D008851 8.9e-85 319.3 658 33.9
Oeu034822.1 Olea europaea HOM05D007104 ORTHO05D008851 3.8e-83 313.9 391 58.6
Pp3c21_12360 Physcomitrium patens HOM05D007104 ORTHO05D008851 1.2e-81 308.9 822 41.4
Mapoly0039s0098 Marchantia polymorpha HOM05D007104 ORTHO05D008851 4.0e-77 293.9 790 41.0
Cpa.g.sc45.26 Carica papaya HOM05D007104 ORTHO05D008851 1.3e-75 288.9 539 56.4
Atru.chr8.2537 Acer truncatum HOM05D007104 ORTHO05D008851 9.3e-74 282.7 407 62.4
Atru.chr8.2538 Acer truncatum HOM05D007104 ORTHO05D008851 4.3e-63 247.3 268 48.9
CDE02G1389 Ceratophyllum demersum HOM05D007104 ORTHO05D008851 1.0e-51 209.5 317 55.5
SMO351G0222 Selaginella moellendorffii HOM05D007104 ORTHO05D008851 1.9e-50 205.3 505 35.4
CARHR210500 Cardamine hirsuta HOM05D007104 ORTHO05D008851 3.5e-49 201.1 225 49.8
unitig_16.g32855 Utricularia gibba HOM05D007104 ORTHO05D008851 4.5e-44 184.1 227 49.3
Hma1.2p1_0111F.1_g053720 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 2.4e-29 135.2 134 51.5
Oeu027653.1 Olea europaea HOM05D007104 ORTHO05D008851 5.3e-29 134.0 160 44.4
Pp3c22_3080 Physcomitrium patens HOM05D007104 ORTHO05D008851 8.2e-22 110.2 173 38.2
Rhsim04G0181000 Rhododendron simsii HOM05D007104 ORTHO05D008851 1.1e-18 99.8 106 44.3
RcHm_v2.0_Chr3g0468351 Rosa chinensis HOM05D007104 ORTHO05D008851 1.4e-13 82.8 77 57.1
CBR_g39241 Chara braunii HOM05D007104 ORTHO05D008851 8.5e-11 73.6 163 56.4
Nn1g01467 Nelumbo nucifera HOM05D007104 ORTHO05D008851 1.5e-10 72.8 46 82.6
PRCOL_00006441 Prasinoderma coloniale HOM05D007104 ORTHO05D008851 1.6e-09 69.3 189 27.0
Glyma.18G276500 Glycine max HOM05D004127 ORTHO05D005119 6.1e-09 67.4 178 27.5
Glyma.08G254000 Glycine max HOM05D004127 ORTHO05D005119 8.0e-09 67.0 178 27.0
Zm00001eb066310 Zea mays HOM05D000001 ORTHO05D010224 1.0e-08 66.6 361 23.3
BcaB05g21499 Brassica carinata HOM05D007251 ORTHO05D009266 4.0e-08 64.7 201 25.9
BraA02t05043Z Brassica rapa HOM05D007251 ORTHO05D009266 6.8e-08 63.9 201 25.9
Zm00001eb328630 Zea mays HOM05D000001 ORTHO05D000003 1.5e-07 62.8 169 23.7
AagrBONN_evm.TU.Sc2ySwM_228.1639 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.0e-07 62.4 251 21.9
AagrBONN_evm.TU.Sc2ySwM_228.531 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.0e-07 62.4 279 21.5
AagrBONN_evm.TU.Sc2ySwM_344.150 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.0e-07 62.4 247 22.7
Nn1g07072 Nelumbo nucifera HOM05D007104 ORTHO05D008851 2.0e-07 62.4 38 76.3
GSVIVG01019231001 Vitis vinifera HOM05D000001 ORTHO05D000003 2.0e-07 62.4 170 26.5
Aa31LG5G14090 Aethionema arabicum HOM05D000001 ORTHO05D000003 1.3e-06 59.7 353 19.5
MBI01_g24438_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009270 1.3e-06 59.7 185 25.4
PSO063G0176 Papaver somniferum HOM05D007251 ORTHO05D009266 1.3e-06 59.7 108 35.2
PSO782G5553 Papaver somniferum HOM05D007251 ORTHO05D009266 1.3e-06 59.7 108 35.2
Aa31LG10G8340 Aethionema arabicum HOM05D001779 ORTHO05D001753 1.7e-06 59.3 172 25.6
AagrBONN_evm.TU.Sc2ySwM_368.2099 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.7e-06 59.3 144 23.6
Manes.09G132500 Manihot esculenta HOM05D000001 ORTHO05D000003 1.7e-06 59.3 172 23.8
CsaV3_3G009980 Cucumis sativus L. HOM05D000001 ORTHO05D000003 2.2e-06 58.9 179 24.0
AagrBONN_evm.TU.Sc2ySwM_228.2515 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.8e-06 58.5 251 22.7
AagrBONN_evm.TU.Sc2ySwM_344.335__336 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.8e-06 58.5 260 23.1
AagrBONN_evm.TU.Sc2ySwM_344.4353__4354 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.8e-06 58.5 244 22.1
ClCG05G002530 Citrullus lanatus HOM05D000001 ORTHO05D000003 2.8e-06 58.5 179 24.6
PSO210G0619 Papaver somniferum HOM05D000001 ORTHO05D000003 2.8e-06 58.5 417 19.9
BolC2t06419H Brassica oleracea HOM05D007251 ORTHO05D009266 3.7e-06 58.2 201 24.4
MD08G1128000 Malus domestica HOM05D007251 ORTHO05D009266 3.7e-06 58.2 124 30.6
AagrBONN_evm.TU.Sc2ySwM_344.804 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.8e-06 57.8 255 22.0
Cfa003687 Carpinus fangiana HOM05D000001 ORTHO05D000003 4.8e-06 57.8 172 22.7
CiPaw.08G020100 Carya illinoinensis HOM05D007251 ORTHO05D009266 4.8e-06 57.8 137 29.9
CsaV3_7G008820 Cucumis sativus L. HOM05D000001 ORTHO05D000003 4.8e-06 57.8 285 22.8
Gohir.A05G064200 Gossypium hirsutum HOM05D007251 ORTHO05D009266 4.8e-06 57.8 213 24.9
Nn8g40494 Nelumbo nucifera HOM05D007251 ORTHO05D009266 6.3e-06 57.4 147 27.9
QL12p025168 Quercus lobata HOM05D007251 ORTHO05D009266 6.3e-06 57.4 199 24.6
Ah.08g211930 Amaranthus hybridus HOM05D000855 ORTHO05D008530 8.3e-06 57.0 162 23.5
Ciclev10010499m.g Citrus clementina HOM05D007251 ORTHO05D009266 8.3e-06 57.0 118 28.0


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