Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g12909 Nelumbo nucifera HOM05D004429 ORTHO05D005583 8.4e-103 377.1 199 100.0
Nn2g10451 Nelumbo nucifera HOM05D004429 ORTHO05D005583 4.3e-75 285.0 212 76.4
TAR369G0217 Trochodendron aralioides HOM05D004429 ORTHO05D005583 1.4e-70 270.0 199 74.9
Dinv37207 Davidia involucrata HOM05D004429 ORTHO05D005583 3.0e-68 262.3 198 67.2
MBI14_g36720_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 2.2e-63 246.1 209 69.4
CSS0012060 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 1.9e-62 243.0 202 62.9
Prupe.6G250000 Prunus persica HOM05D004429 ORTHO05D005583 4.2e-62 241.9 201 64.2
Hma1.2p1_0350F.1_g132400 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 5.5e-62 241.5 201 63.2
Hma1.2p1_1065F.1_g253770 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 5.5e-62 241.5 201 63.2
MD04G1120700 Malus domestica HOM05D004429 ORTHO05D005583 1.6e-61 240.0 207 66.7
CiPaw.10G142900 Carya illinoinensis HOM05D004429 ORTHO05D005583 2.1e-61 239.6 198 64.1
Gohir.D11G344900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 2.1e-61 239.6 202 69.3
Gorai.007G375300 Gossypium raimondii HOM05D004429 ORTHO05D005583 2.1e-61 239.6 202 69.3
COL.COLO4_14858 Corchorus olitorius HOM05D004429 ORTHO05D005583 2.7e-61 239.2 207 67.1
MD12G1138000 Malus domestica HOM05D004429 ORTHO05D005583 3.6e-61 238.8 200 66.0
Aqoxy2G02012 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 7.9e-61 237.7 211 65.4
Cc06_g03000 Coffea canephora HOM05D004429 ORTHO05D005583 7.9e-61 237.7 218 62.8
Gohir.A11G326000 Gossypium hirsutum HOM05D004429 ORTHO05D005583 1.8e-60 236.5 202 68.8
DCAR_014836 Daucus carota HOM05D004429 ORTHO05D005583 3.0e-60 235.7 208 63.0
TWI74G1196 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 6.7e-60 234.6 202 65.3
GSVIVG01025623001 Vitis vinifera HOM05D004429 ORTHO05D005583 1.1e-59 233.8 206 62.6
QL07p047160 Quercus lobata HOM05D004429 ORTHO05D005583 1.5e-59 233.4 206 65.5
QL05p010485 Quercus lobata HOM05D004429 ORTHO05D005583 3.3e-59 232.3 206 66.0
TWI53G0393 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 3.3e-59 232.3 205 63.9
ATR0222G016 Amborella trichopoda HOM05D004429 ORTHO05D005583 7.4e-59 231.1 200 60.0
Manes.12G146400 Manihot esculenta HOM05D004429 ORTHO05D005583 1.3e-58 230.3 199 64.8
PSO339G1692 Papaver somniferum HOM05D004429 ORTHO05D005583 1.3e-58 230.3 213 65.7
PSO648G0090 Papaver somniferum HOM05D004429 ORTHO05D005583 1.7e-58 229.9 213 66.2
Thecc.05G044800 Theobroma cacao HOM05D004429 ORTHO05D005583 1.7e-58 229.9 201 65.2
Duzib128G1460 Durio zibethinus HOM05D004429 ORTHO05D005583 2.2e-58 229.6 202 66.8
ClCG10G020910 Citrullus lanatus HOM05D004429 ORTHO05D005583 2.8e-58 229.2 200 64.5
Gohir.A09G158500 Gossypium hirsutum HOM05D004429 ORTHO05D005583 2.8e-58 229.2 202 61.4
CSS0043629 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 6.3e-58 228.0 210 63.3
THA.LOC104806580 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 6.3e-58 228.0 204 62.7
Lj2C100T9 Lonicera japonica HOM05D004429 ORTHO05D005583 1.4e-57 226.9 208 62.0
Sp5g08720 Schrenkiella parvula HOM05D004429 ORTHO05D005583 4.1e-57 225.3 197 57.4
Thhalv10010743m.g Eutrema salsugineum HOM05D004429 ORTHO05D005583 5.3e-57 224.9 197 57.4
FvH4_6g14340 Fragaria vesca HOM05D004429 ORTHO05D005583 9.1e-57 224.2 202 63.9
FAN14G5191 Fragaria x ananassa HOM05D004429 ORTHO05D005583 9.1e-57 224.2 202 63.9
Ciclev10013673m.g Citrus clementina HOM05D004429 ORTHO05D005583 1.2e-56 223.8 208 65.4
FAN02G4491 Fragaria x ananassa HOM05D004429 ORTHO05D005583 1.5e-56 223.4 201 63.2
Gohir.D09G153900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 1.5e-56 223.4 202 59.9
Duzib106G0640 Durio zibethinus HOM05D004429 ORTHO05D005583 2.0e-56 223.0 210 60.0
BraA09t40127Z Brassica rapa HOM05D004429 ORTHO05D005583 3.4e-56 222.2 200 58.5
Aa31LG5G22900 Aethionema arabicum HOM05D004429 ORTHO05D005583 4.5e-56 221.9 206 57.3
CARHR163560 Cardamine hirsuta HOM05D004429 ORTHO05D005583 5.9e-56 221.5 197 55.8
AT3G53630 Arabidopsis thaliana HOM05D004429 ORTHO05D005583 7.7e-56 221.1 198 57.1
AL5G34580 Arabidopsis lyrata HOM05D004429 ORTHO05D005583 1.0e-55 220.7 198 57.1
FAN09G1286 Fragaria x ananassa HOM05D004429 ORTHO05D005583 1.0e-55 220.7 200 60.5
A09p46640 Brassica napus HOM05D004429 ORTHO05D005583 1.7e-55 219.9 201 58.7
CsaV3_3G035100 Cucumis sativus L. HOM05D004429 ORTHO05D005583 1.7e-55 219.9 207 59.4
Gorai.006G175400 Gossypium raimondii HOM05D004429 ORTHO05D005583 1.7e-55 219.9 203 59.1
THA.LOC104823424 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 1.7e-55 219.9 201 55.2
Potri.006G082400 Populus trichocarpa HOM05D004429 ORTHO05D005583 2.2e-55 219.5 205 64.9
MELO3C009280.2 Cucumis melo HOM05D004429 ORTHO05D005583 3.8e-55 218.8 205 59.5
Sc20g0004500 Simmondsia chinensis HOM05D004429 ORTHO05D005583 3.8e-55 218.8 207 61.4
Sed0001771 Sechium edule HOM05D004429 ORTHO05D005583 5.0e-55 218.4 211 61.6
Solyc10g084620.3 Solanum lycopersicum HOM05D004429 ORTHO05D005583 5.0e-55 218.4 208 60.1
Carub.0005s2021 Capsella rubella HOM05D004429 ORTHO05D005583 1.9e-54 216.5 199 56.8
Oeu060052.2 Olea europaea HOM05D004429 ORTHO05D005583 1.9e-54 216.5 212 58.0
Sopen10g034060 Solanum pennellii HOM05D004429 ORTHO05D005583 1.9e-54 216.5 210 60.5
PGSC0003DMG400008931 Solanum tuberosum HOM05D004429 ORTHO05D005583 1.9e-54 216.5 213 62.0
C04p38880 Brassica napus HOM05D001071 ORTHO05D005583 3.2e-54 215.7 200 59.5
BolC8t50499H Brassica oleracea HOM05D004429 ORTHO05D005583 3.2e-54 215.7 197 60.9
AUR62013875 Chenopodium quinoa HOM05D004429 ORTHO05D005583 3.2e-54 215.7 209 63.2
FAN05G1703 Fragaria x ananassa HOM05D004429 ORTHO05D005583 7.2e-54 214.5 188 61.7
BcaC02g09143 Brassica carinata HOM05D004429 ORTHO05D005583 9.4e-54 214.2 199 59.3
BolC4t25460H Brassica oleracea HOM05D004429 ORTHO05D005583 9.4e-54 214.2 199 59.3
CDE04G3062 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 9.4e-54 214.2 203 59.6
Nitab4.5_0000216g0050 Nicotiana tabacum HOM05D004429 ORTHO05D005583 1.2e-53 213.8 199 63.8
RcHm_v2.0_Chr3g0467391 Rosa chinensis HOM05D004429 ORTHO05D005583 1.6e-53 213.4 206 62.1
Solyc09g010390.2 Solanum lycopersicum HOM05D004429 ORTHO05D005583 2.1e-53 213.0 221 60.6
BcaC07g39724 Brassica carinata HOM05D004429 ORTHO05D005583 2.7e-53 212.6 199 60.8
Lalb_Chr20g0113181 Lupinus albus HOM05D004429 ORTHO05D005583 4.7e-53 211.8 216 59.3
Sabra06G0062200 Salix brachista HOM05D004429 ORTHO05D005583 4.7e-53 211.8 198 64.1
C08p28960 Brassica napus HOM05D004429 ORTHO05D005583 7.9e-53 211.1 197 60.9
Oeu024364.1 Olea europaea HOM05D004429 ORTHO05D005583 7.9e-53 211.1 214 61.2
PGR004G1112 Punica granatum HOM05D004429 ORTHO05D005583 1.4e-52 210.3 216 56.9
SalBow3G1038 Salvia bowleyana HOM05D004429 ORTHO05D005583 1.8e-52 209.9 204 56.9
Aa31LG10G9470 Aethionema arabicum HOM05D004429 ORTHO05D005583 3.9e-52 208.8 190 55.8
BraA04t16299Z Brassica rapa HOM05D001071 ORTHO05D005583 8.8e-52 207.6 202 55.0
Peaxi162Scf00604g00415 Petunia axillaris HOM05D004429 ORTHO05D005583 8.8e-52 207.6 213 59.2
A04p05960 Brassica napus HOM05D004429 ORTHO05D005583 1.5e-51 206.8 202 55.0
EL10Ac1g02077 Beta vulgaris HOM05D004429 ORTHO05D005583 2.0e-51 206.5 200 62.5
BcaB02g08517 Brassica carinata HOM05D004429 ORTHO05D005583 2.0e-51 206.5 203 57.6
Sopen09g005130 Solanum pennellii HOM05D004429 ORTHO05D005583 4.4e-51 205.3 205 62.0
Sed0027367 Sechium edule HOM05D004429 ORTHO05D005583 1.3e-50 203.8 204 58.3
CAN.G688.9 Capsicum annuum HOM05D004429 ORTHO05D005583 1.7e-50 203.4 215 58.1
SGA_v2.0_scaffold126G33824 Striga asiatica HOM05D004429 ORTHO05D005583 2.2e-50 203.0 209 61.2
Ah.01g015860 Amaranthus hybridus HOM05D004429 ORTHO05D005583 2.8e-50 202.6 218 52.3
BcaB01g00258 Brassica carinata HOM05D004429 ORTHO05D005583 3.7e-50 202.2 201 56.2
CAN.G97.23 Capsicum annuum HOM05D004429 ORTHO05D005583 3.7e-50 202.2 210 56.7
Migut.J00365 Erythranthe guttata HOM05D004429 ORTHO05D005583 1.4e-49 200.3 220 54.5
CiPaw.09G188700 Carya illinoinensis HOM05D004429 ORTHO05D005583 1.6e-48 196.8 203 52.2
Lsat_1_v5_gn_6_32421 Lactuca sativa HOM05D004429 ORTHO05D005583 1.6e-48 196.8 215 53.0
MSTRG.19104 Avicennia marina HOM05D004429 ORTHO05D005583 2.6e-48 196.1 206 55.3
Eucgr.K03161 Eucalyptus grandis HOM05D004429 ORTHO05D005583 7.7e-48 194.5 223 55.2
Nitab4.5_0012047g0010 Nicotiana tabacum HOM05D004429 ORTHO05D005583 1.5e-46 190.3 200 56.5
MSTRG.5688 Avicennia marina HOM05D004429 ORTHO05D005583 7.2e-46 188.0 212 51.4
Glyma.19G173500 Glycine max HOM05D004429 ORTHO05D005583 7.2e-46 188.0 209 56.0
Nitab4.5_0000202g0130 Nicotiana tabacum HOM05D004429 ORTHO05D005583 7.2e-46 188.0 183 63.4
AUR62036719 Chenopodium quinoa HOM05D004429 ORTHO05D005583 9.4e-46 187.6 152 65.8
HanXRQChr14g0459271 Helianthus annuus HOM05D004429 ORTHO05D005583 3.6e-45 185.7 217 51.6
PGSC0003DMG400010996 Solanum tuberosum HOM05D004429 ORTHO05D005583 4.7e-45 185.3 161 60.2
Nitab4.5_0002077g0140 Nicotiana tabacum HOM05D004429 ORTHO05D005583 1.0e-44 184.1 161 61.5
Phvul.001G170200 Phaseolus vulgaris HOM05D004429 ORTHO05D005583 1.4e-44 183.7 208 57.7
Glyma.03G172600 Glycine max HOM05D004429 ORTHO05D005583 1.8e-44 183.3 211 55.0
ATR0222G031 Amborella trichopoda HOM05D004429 ORTHO05D005583 2.3e-44 183.0 176 55.1
Lsat_1_v5_gn_2_110581 Lactuca sativa HOM05D004429 ORTHO05D005583 8.8e-44 181.0 211 51.7
SHI12608 Sapria himalayana HOM05D004429 ORTHO05D000003 1.2e-43 180.6 205 54.6
arahy.Tifrunner.gnm1.ann1.2JSS8R Arachis hypogaea HOM05D004429 ORTHO05D005583 1.5e-43 180.3 153 61.4
ECA233G0195 Erigeron canadensis HOM05D004429 ORTHO05D005583 8.2e-42 174.5 209 51.2
VMungo1383G1968 Vigna mungo HOM05D004429 ORTHO05D005583 1.3e-39 167.2 186 56.5
Migut.L01619 Erythranthe guttata HOM05D004429 ORTHO05D005583 1.7e-39 166.8 184 51.1
Lj1g0006432 Lotus japonicus HOM05D004429 ORTHO05D005583 2.2e-39 166.4 217 51.2
unitig_578.g15706 Utricularia gibba HOM05D004429 ORTHO05D005583 1.5e-38 163.7 212 46.2
Atru.chr8.1930 Acer truncatum HOM05D004429 ORTHO05D005583 6.1e-37 158.3 138 63.8
COL.COLO4_24433 Corchorus olitorius HOM05D004429 ORTHO05D005583 2.3e-36 156.4 128 61.7
SEGI_08514 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 6.8e-36 154.8 197 41.6
Zm00001eb012690 Zea mays HOM05D004429 ORTHO05D005583 4.4e-35 152.1 216 41.2
SEGI_33598 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 7.5e-35 151.4 203 45.8
Os03g0279600 Oryza sativa ssp. japonica HOM05D004429 ORTHO05D005583 1.3e-34 150.6 215 45.1
unitig_26.g9203 Utricularia gibba HOM05D004429 ORTHO05D005583 2.4e-33 146.4 154 51.9
HPP92_001685 Vanilla planifolia HOM05D004429 ORTHO05D005583 3.1e-33 146.0 210 46.7
QL01p033097 Quercus lobata HOM05D004429 ORTHO05D005583 4.1e-33 145.6 200 41.0
MBI18_g47300_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 9.1e-33 144.4 121 67.8
Aqoxy3G04288 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 3.5e-32 142.5 121 58.7
MBI06_g43519_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 7.7e-32 141.4 121 66.9
Atru.chr7.899 Acer truncatum HOM05D004429 ORTHO05D005583 8.5e-31 137.9 116 65.5
TPR.G11987 Trifolium pratense HOM05D004429 ORTHO05D005583 1.1e-30 137.5 196 43.4
Ca_08790_v3 Cicer arietinum L. HOM05D004429 ORTHO05D005583 3.2e-30 136.0 194 41.8
Rhsim05G0188000 Rhododendron simsii HOM05D004429 ORTHO05D005583 1.2e-29 134.0 134 54.5
Haze_24041 Corylus avellana HOM05D004429 ORTHO05D005583 1.4e-28 130.6 183 42.6
Medtr7g099970 Medicago truncatula HOM05D004429 ORTHO05D005583 1.8e-28 130.2 210 36.7
SGA_v2.0_scaffold87G27174 Striga asiatica HOM05D004429 ORTHO05D005583 1.8e-28 130.2 137 54.0
CDE07G1713 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 1.2e-27 127.5 189 45.5
Ciclev10029396m.g Citrus clementina HOM05D004429 ORTHO05D005583 3.4e-27 125.9 193 40.9
DCAR_017884 Daucus carota HOM05D004429 ORTHO05D005583 2.8e-26 122.9 203 40.4
Atru.chr3.3828 Acer truncatum HOM05D004429 ORTHO05D005583 5.9e-24 115.2 141 44.7
SEGI_24259 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 7.8e-24 114.8 177 37.9
Actinidia05294 Actinidia chinensis HOM05D004429 ORTHO05D005583 1.7e-23 113.6 100 57.0
CBR_g20121 Chara braunii HOM05D004429 ORTHO05D005583 3.3e-22 109.4 95 48.4
Psat3g048680 Pisum sativum HOM05D004429 ORTHO05D005583 1.2e-21 107.5 200 35.0
Mapoly0066s0057 Marchantia polymorpha HOM05D004429 ORTHO05D005583 6.1e-21 105.1 145 42.1
SMO348G0079 Selaginella moellendorffii HOM05D004429 ORTHO05D005583 1.8e-20 103.6 86 51.2
Pp3c15_19860 Physcomitrium patens HOM05D004429 ORTHO05D005583 3.7e-18 95.9 128 39.1
Sopen04g022580 Solanum pennellii HOM05D004429 ORTHO05D005583 8.3e-18 94.7 180 39.4
Pp3c9_19700 Physcomitrium patens HOM05D004429 ORTHO05D005583 3.2e-17 92.8 128 39.8
Pp3c4_10520 Physcomitrium patens HOM05D004429 ORTHO05D005583 9.2e-17 91.3 86 47.7
TPR.G8932 Trifolium pratense HOM05D004429 ORTHO05D005583 1.2e-16 90.9 99 48.5
EL10Ac5g11422 Beta vulgaris HOM05D004429 ORTHO05D005583 3.0e-15 86.3 115 51.3
EL10Ac9g21191 Beta vulgaris HOM05D006860 ORTHO05D009547 1.2e-13 80.9 112 50.0
C06p21580 Brassica napus HOM05D004429 ORTHO05D021447 7.5e-11 71.6 73 49.3
TPR.G14114 Trifolium pratense HOM05D004429 ORTHO05D005583 2.9e-10 69.7 113 37.2
SGA_v2.0_scaffold61G21134 Striga asiatica HOM05D004429 ORTHO05D005583 3.7e-10 69.3 83 50.6
BolC6t37347H Brassica oleracea HOM05D004429 ORTHO05D021447 2.4e-09 66.6 71 49.3
SGA_v2.0_scaffold32G13323 Striga asiatica HOM05D004429 ORTHO05D005583 2.3e-07 60.1 91 45.1
Ah.00g000610 Amaranthus hybridus HOM05D004429 ORTHO05D005583 4.3e-06 55.8 76 42.1


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