Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g12788 Nelumbo nucifera HOM05D001976 ORTHO05D001960 6.5e-57 224.2 142 100.0
Nn7g37309 Nelumbo nucifera HOM05D001976 ORTHO05D001960 4.0e-22 108.6 68 86.8
Nn1g01713 Nelumbo nucifera HOM05D001976 ORTHO05D001960 6.3e-12 74.7 77 58.4
GSVIVG01019432001 Vitis vinifera HOM05D001976 ORTHO05D001960 7.0e-11 71.2 70 65.7
Manes.14G121828 Manihot esculenta HOM05D001976 ORTHO05D001960 1.2e-10 70.5 67 61.2
TAR636G0380 Trochodendron aralioides HOM05D001976 ORTHO05D001960 1.2e-10 70.5 78 59.0
Manes.02G015825 Manihot esculenta HOM05D001976 ORTHO05D001960 4.5e-10 68.6 65 61.5
TAR374G0991 Trochodendron aralioides HOM05D001976 ORTHO05D001960 1.7e-09 66.6 77 61.0
Hma1.2p1_0216F.1_g091200 Hydrangea macrophylla HOM05D001976 ORTHO05D001960 2.3e-09 66.2 85 55.3
Dinv37579 Davidia involucrata HOM05D001976 ORTHO05D001960 3.8e-09 65.5 80 55.0
FvH4_5g03470 Fragaria vesca HOM05D001976 ORTHO05D001960 3.8e-09 65.5 69 59.4
Thecc.03G288300 Theobroma cacao HOM05D001976 ORTHO05D001960 6.6e-09 64.7 73 58.9
FAN18G1913 Fragaria x ananassa HOM05D001976 ORTHO05D001960 1.1e-08 63.9 69 58.0
FAN18G1918 Fragaria x ananassa HOM05D001976 ORTHO05D001960 1.1e-08 63.9 69 58.0
Duzib084G0318 Durio zibethinus HOM05D001976 ORTHO05D001960 1.5e-08 63.5 73 57.5
FAN08G2781 Fragaria x ananassa HOM05D001976 ORTHO05D001960 1.5e-08 63.5 69 59.4
Gohir.A12G232900 Gossypium hirsutum HOM05D001976 ORTHO05D001960 1.9e-08 63.2 75 56.0
Gohir.D12G234501 Gossypium hirsutum HOM05D001976 ORTHO05D001960 1.9e-08 63.2 75 56.0
Gorai.008G250800 Gossypium raimondii HOM05D001976 ORTHO05D001960 1.9e-08 63.2 75 56.0
Duzib205G1380 Durio zibethinus HOM05D001976 ORTHO05D001960 5.6e-08 61.6 73 56.2
TWI81G0614 Tripterygium wilfordii HOM05D001976 ORTHO05D001960 7.3e-08 61.2 66 60.6
Duzib068G0824 Durio zibethinus HOM05D001976 ORTHO05D001960 9.5e-08 60.8 73 57.5
Prupe.5G110000 Prunus persica HOM05D001976 ORTHO05D001960 1.2e-07 60.5 70 52.9
FAN04G0634 Fragaria x ananassa HOM05D001976 ORTHO05D001960 2.8e-07 59.3 77 51.9
FAN13G2994 Fragaria x ananassa HOM05D001976 ORTHO05D001960 2.8e-07 59.3 84 51.2
FAN04G1876 Fragaria x ananassa HOM05D001976 ORTHO05D001960 3.6e-07 58.9 70 55.7
Lj2P176T17 Lonicera japonica HOM05D001976 ORTHO05D001960 8.0e-07 57.8 61 62.3
Solyc08g081710.3 Solanum lycopersicum HOM05D001976 ORTHO05D001960 8.0e-07 57.8 47 72.3
CiPaw.11G127900 Carya illinoinensis HOM05D001976 ORTHO05D001960 1.0e-06 57.4 68 55.9
TAR629G3496 Trochodendron aralioides HOM05D001976 ORTHO05D001960 1.0e-06 57.4 49 69.4
FAN13G0870 Fragaria x ananassa HOM05D001976 ORTHO05D001960 1.8e-06 56.6 84 50.0
CSS0015961 Camellia sinensis var. sinensis HOM05D001976 ORTHO05D001960 3.0e-06 55.8 86 46.5
PGSC0003DMG400012175 Solanum tuberosum HOM05D001976 ORTHO05D001960 3.0e-06 55.8 47 68.1
Cc08_g15410 Coffea canephora HOM05D001976 ORTHO05D001960 4.0e-06 55.5 62 54.8


User provided reference genes

Program Settings