Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g12772 Nelumbo nucifera HOM05D007046 ORTHO05D008788 1.6e-53 212.6 113 100.0
Nn8g39721 Nelumbo nucifera HOM05D007046 ORTHO05D008788 5.8e-16 87.8 40 97.5
TAR625G0755 Trochodendron aralioides HOM05D007046 ORTHO05D008788 3.7e-15 85.1 43 81.4
Nn6g34105 Nelumbo nucifera HOM05D007046 ORTHO05D008788 3.9e-12 75.1 63 65.1
Os08g0292600 Oryza sativa ssp. japonica HOM05D007046 ORTHO05D008788 9.5e-11 70.5 39 74.4
Aqoxy7G03530 Aquilegia oxysepala HOM05D007046 ORTHO05D008788 1.2e-10 70.1 39 71.8
Zm00001eb000740 Zea mays HOM05D007046 ORTHO05D008788 8.1e-10 67.4 39 69.2
Nitab4.5_0001021g0040 Nicotiana tabacum HOM05D007046 ORTHO05D008788 1.8e-09 66.2 43 62.8
Nitab4.5_0005384g0010 Nicotiana tabacum HOM05D007046 ORTHO05D008788 1.8e-09 66.2 43 62.8
Actinidia26351 Actinidia chinensis HOM05D007046 ORTHO05D008788 3.1e-09 65.5 42 61.9
PSO210G0748 Papaver somniferum HOM05D007046 ORTHO05D008788 1.2e-08 63.5 38 65.8
PSO447G0221 Papaver somniferum HOM05D007046 ORTHO05D008788 1.2e-08 63.5 38 65.8
Sopen07g003150 Solanum pennellii HOM05D007046 ORTHO05D008788 1.2e-08 63.5 56 50.0
PGSC0003DMG400030738 Solanum tuberosum HOM05D007046 ORTHO05D008788 1.2e-08 63.5 56 50.0
CSS0047212 Camellia sinensis var. sinensis HOM05D007046 ORTHO05D008788 3.4e-08 62.0 39 66.7
HanXRQChr03g0064041 Helianthus annuus HOM05D007046 ORTHO05D008788 3.4e-08 62.0 45 60.0
Solyc07g007110.4 Solanum lycopersicum HOM05D007046 ORTHO05D008788 3.4e-08 62.0 56 48.2
CDE02G2211 Ceratophyllum demersum HOM05D007046 ORTHO05D008788 4.4e-08 61.6 39 61.5
Dinv42912 Davidia involucrata HOM05D007046 ORTHO05D008788 4.4e-08 61.6 56 57.1
Dinv43188 Davidia involucrata HOM05D007046 ORTHO05D008788 4.4e-08 61.6 56 57.1
Migut.J01275 Erythranthe guttata HOM05D007046 ORTHO05D008788 4.4e-08 61.6 44 63.6
vmacro06109 Vaccinium macrocarpon HOM05D007046 ORTHO05D008788 4.4e-08 61.6 39 66.7
ECA240G3524 Erigeron canadensis HOM05D007046 ORTHO05D008788 5.8e-08 61.2 53 54.7
Hma1.2p1_0949F.1_g240590 Hydrangea macrophylla HOM05D007046 ORTHO05D008788 5.8e-08 61.2 40 65.0
Lsat_1_v5_gn_7_47900 Lactuca sativa HOM05D007046 ORTHO05D008788 7.5e-08 60.8 40 62.5
Cc06_g07400 Coffea canephora HOM05D007046 ORTHO05D008788 9.9e-08 60.5 56 57.1
Potri.006G189900 Populus trichocarpa HOM05D007046 ORTHO05D008788 9.9e-08 60.5 52 57.7
Manes.14G138900 Manihot esculenta HOM05D007046 ORTHO05D008788 1.7e-07 59.7 55 56.4
Hma1.2p1_1784F.1_g302170 Hydrangea macrophylla HOM05D007046 ORTHO05D008788 2.2e-07 59.3 39 64.1
SGA_v2.0_scaffold229G43345 Striga asiatica HOM05D007046 ORTHO05D008788 3.7e-07 58.5 45 60.0
ATR0629G031 Amborella trichopoda HOM05D007046 ORTHO05D008788 4.9e-07 58.2 39 61.5
MSTRG.19625 Avicennia marina HOM05D007046 ORTHO05D008788 4.9e-07 58.2 44 61.4
Oeu052181.1 Olea europaea HOM05D007046 ORTHO05D008788 6.4e-07 57.8 56 48.2
Peaxi162Scf00347g00020 Petunia axillaris HOM05D007046 ORTHO05D008788 6.4e-07 57.8 43 53.5
CANSAT11G2023 Cannabis sativa HOM05D007046 ORTHO05D008788 8.3e-07 57.4 44 56.8
Gohir.D06G049100 Gossypium hirsutum HOM05D007046 ORTHO05D008788 1.1e-06 57.0 85 40.0
Mapoly0218s0001 Marchantia polymorpha HOM05D007046 ORTHO05D008788 1.9e-06 56.2 39 61.5
arahy.Tifrunner.gnm1.ann1.LM8BDD Arachis hypogaea HOM05D007046 ORTHO05D008788 2.4e-06 55.8 54 55.6
Gohir.A06G049800 Gossypium hirsutum HOM05D007046 ORTHO05D008788 2.4e-06 55.8 85 40.0
PGR102G0910 Punica granatum HOM05D007046 ORTHO05D008788 2.4e-06 55.8 30 73.3
TWI63G1442 Tripterygium wilfordii HOM05D007046 ORTHO05D008788 2.4e-06 55.8 53 54.7
AagrBONN_evm.TU.Sc2ySwM_117.689 Anthoceros agrestis HOM05D007046 ORTHO05D008788 3.2e-06 55.5 39 59.0
arahy.Tifrunner.gnm1.ann1.I71V0M Arachis hypogaea HOM05D007046 ORTHO05D008788 5.4e-06 54.7 54 53.7
Thhalv10004727m.g Eutrema salsugineum HOM05D007046 ORTHO05D008788 5.4e-06 54.7 49 51.0
SalBow1G5965 Salvia bowleyana HOM05D007046 ORTHO05D008788 5.4e-06 54.7 53 49.1
Gorai.010G056000 Gossypium raimondii HOM05D007046 ORTHO05D008788 9.2e-06 53.9 85 38.8
Medtr2g461260 Medicago truncatula HOM05D007046 ORTHO05D008788 9.2e-06 53.9 44 52.3
Sc08g0005790 Simmondsia chinensis HOM05D007046 ORTHO05D008788 9.2e-06 53.9 56 44.6


User provided reference genes

Program Settings