Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g12770 Nelumbo nucifera HOM05D003525 ORTHO05D019487 3.1e-72 275.0 137 100.0
Nn5g29579 Nelumbo nucifera HOM05D003525 ORTHO05D004578 2.9e-38 162.2 90 87.8
DCAR_022933 Daucus carota HOM05D003525 ORTHO05D004578 2.6e-34 149.1 91 80.2
CiPaw.05G064000 Carya illinoinensis HOM05D003525 ORTHO05D004578 3.3e-34 148.7 89 83.1
CiPaw.06G135700 Carya illinoinensis HOM05D003525 ORTHO05D004578 9.7e-34 147.1 89 82.0
Eucgr.I01265 Eucalyptus grandis HOM05D003525 ORTHO05D004578 1.3e-33 146.7 89 82.0
vmacro17495 Vaccinium macrocarpon HOM05D003525 ORTHO05D004578 1.3e-33 146.7 89 83.1
Rhsim05G0074500 Rhododendron simsii HOM05D003525 ORTHO05D004578 2.8e-33 145.6 89 82.0
Solyc10g051340.2 Solanum lycopersicum HOM05D003525 ORTHO05D004578 2.8e-33 145.6 89 77.5
ATR0733G133 Amborella trichopoda HOM05D003525 ORTHO05D004578 3.7e-33 145.2 90 77.8
Nn1g05019 Nelumbo nucifera HOM05D003525 ORTHO05D004578 3.7e-33 145.2 90 80.0
CSS0001193 Camellia sinensis var. sinensis HOM05D003525 ORTHO05D004578 4.8e-33 144.8 93 78.5
Cpa.g.sc62.144 Carica papaya HOM05D003525 ORTHO05D004578 4.8e-33 144.8 90 78.9
Lj9A369G67 Lonicera japonica HOM05D003525 ORTHO05D004578 4.8e-33 144.8 86 80.2
TWI31G1364 Tripterygium wilfordii HOM05D003525 ORTHO05D004578 4.8e-33 144.8 89 78.7
Duzib132G0954 Durio zibethinus HOM05D003525 ORTHO05D004578 6.3e-33 144.4 89 78.7
MBI19_g07191_MAGBIO Magnolia biondii HOM05D003525 ORTHO05D004578 8.2e-33 144.1 89 79.8
Oeu003718.1 Olea europaea HOM05D003525 ORTHO05D004578 8.2e-33 144.1 90 77.8
COL.COLO4_25923 Corchorus olitorius HOM05D003525 ORTHO05D004578 1.1e-32 143.7 89 77.5
Actinidia17817 Actinidia chinensis HOM05D003525 ORTHO05D004578 1.4e-32 143.3 89 80.9
Actinidia27898 Actinidia chinensis HOM05D003525 ORTHO05D004578 1.4e-32 143.3 89 80.9
MD05G1067200 Malus domestica HOM05D003525 ORTHO05D004578 1.4e-32 143.3 89 74.2
Cfa005008 Carpinus fangiana HOM05D003525 ORTHO05D004578 1.8e-32 142.9 89 78.7
Ciclev10028340m.g Citrus clementina HOM05D003525 ORTHO05D004578 1.8e-32 142.9 89 78.7
Haze_02380 Corylus avellana HOM05D003525 ORTHO05D004578 1.8e-32 142.9 89 78.7
Manes.17G100700 Manihot esculenta HOM05D003525 ORTHO05D004578 1.8e-32 142.9 90 77.8
Thecc.02G086000 Theobroma cacao HOM05D003525 ORTHO05D004578 1.8e-32 142.9 89 77.5
Sopen10g023030 Solanum pennellii HOM05D003525 ORTHO05D004578 2.4e-32 142.5 89 76.4
PGSC0003DMG400033911 Solanum tuberosum HOM05D003525 ORTHO05D004578 2.4e-32 142.5 89 76.4
Aqoxy6G01092 Aquilegia oxysepala HOM05D003525 ORTHO05D004578 3.1e-32 142.1 89 79.8
Duzib052G0238 Durio zibethinus HOM05D003525 ORTHO05D004578 3.1e-32 142.1 89 77.5
Cc02_g17610 Coffea canephora HOM05D003525 ORTHO05D004578 4.1e-32 141.7 97 74.2
Dinv42068 Davidia involucrata HOM05D003525 ORTHO05D004578 4.1e-32 141.7 89 78.7
Prupe.8G097900 Prunus persica HOM05D003525 ORTHO05D004578 4.1e-32 141.7 89 74.2
Zm00001eb215890 Zea mays HOM05D003525 ORTHO05D004578 4.1e-32 141.7 90 77.8
Sed0023087 Sechium edule HOM05D003525 ORTHO05D004578 7.0e-32 141.0 90 78.9
Zm00001eb055650 Zea mays HOM05D003525 ORTHO05D004578 7.0e-32 141.0 90 76.7
PSO210G1867 Papaver somniferum HOM05D003525 ORTHO05D004578 9.1e-32 140.6 89 76.4
PSO731G0006 Papaver somniferum HOM05D003525 ORTHO05D004578 9.1e-32 140.6 89 76.4
TWI79G1197 Tripterygium wilfordii HOM05D003525 ORTHO05D004578 9.1e-32 140.6 89 76.4
Dinv23526 Davidia involucrata HOM05D003525 ORTHO05D004578 1.2e-31 140.2 89 78.7
Duzib248G1434 Durio zibethinus HOM05D003525 ORTHO05D004578 1.2e-31 140.2 90 76.7
Potri.004G153900 Populus trichocarpa HOM05D003525 ORTHO05D004578 1.2e-31 140.2 90 77.8
TAR381G1436 Trochodendron aralioides HOM05D003525 ORTHO05D004578 1.2e-31 140.2 90 77.8
Aqoxy5G01649 Aquilegia oxysepala HOM05D003525 ORTHO05D004578 1.5e-31 139.8 89 77.5
CAN.G1.44 Capsicum annuum HOM05D003525 ORTHO05D004578 1.5e-31 139.8 89 75.3
Glyma.11G118300 Glycine max HOM05D003525 ORTHO05D004578 1.5e-31 139.8 90 76.7
Nitab4.5_0004172g0090 Nicotiana tabacum HOM05D003525 ORTHO05D004578 1.5e-31 139.8 89 75.3
Sabra09G0088700 Salix brachista HOM05D003525 ORTHO05D004578 1.5e-31 139.8 87 80.5
TAR376G0071 Trochodendron aralioides HOM05D003525 ORTHO05D004578 1.5e-31 139.8 89 76.4
Peaxi162Scf00003g01338 Petunia axillaris HOM05D003525 ORTHO05D004578 2.6e-31 139.0 89 76.4
CANSAT01G0222 Cannabis sativa HOM05D003525 ORTHO05D004578 3.5e-31 138.7 89 78.7
ECA234G0118 Erigeron canadensis HOM05D003525 ORTHO05D004578 3.5e-31 138.7 90 77.8
HanXRQChr13g0410301 Helianthus annuus HOM05D003525 ORTHO05D004578 3.5e-31 138.7 90 77.8
MD10G1076900 Malus domestica HOM05D003525 ORTHO05D004578 3.5e-31 138.7 89 70.8
Oeu029126.1 Olea europaea HOM05D003525 ORTHO05D004578 3.5e-31 138.7 97 70.1
Potri.009G115500 Populus trichocarpa HOM05D003525 ORTHO05D004578 3.5e-31 138.7 82 82.9
THA.LOC104819606 Tarenaya hassleriana HOM05D003525 ORTHO05D004578 3.5e-31 138.7 90 76.7
ClCG02G005050 Citrullus lanatus HOM05D003525 ORTHO05D004578 4.5e-31 138.3 90 74.4
Lalb_Chr08g0246641 Lupinus albus HOM05D003525 ORTHO05D004578 4.5e-31 138.3 90 75.6
QL11p043469 Quercus lobata HOM05D003525 ORTHO05D004578 4.5e-31 138.3 89 77.5
TAR628G1296 Trochodendron aralioides HOM05D003525 ORTHO05D004578 4.5e-31 138.3 89 78.7
Atru.chr5.3008 Acer truncatum HOM05D003525 ORTHO05D004578 5.9e-31 137.9 85 78.8
Actinidia00521 Actinidia chinensis HOM05D003525 ORTHO05D004578 5.9e-31 137.9 89 78.7
ClCG11G004450 Citrullus lanatus HOM05D003525 ORTHO05D004578 5.9e-31 137.9 90 77.8
Nitab4.5_0000308g0040 Nicotiana tabacum HOM05D003525 ORTHO05D004578 5.9e-31 137.9 89 75.3
Nitab4.5_0005152g0050 Nicotiana tabacum HOM05D003525 ORTHO05D004578 5.9e-31 137.9 89 76.4
SalBow6G0296 Salvia bowleyana HOM05D003525 ORTHO05D004578 5.9e-31 137.9 89 75.3
SalBow6G6569 Salvia bowleyana HOM05D003525 ORTHO05D004578 5.9e-31 137.9 89 75.3
PGSC0003DMG400000723 Solanum tuberosum HOM05D003525 ORTHO05D004578 5.9e-31 137.9 91 72.5
MSTRG.20085 Avicennia marina HOM05D003525 ORTHO05D004578 7.7e-31 137.5 89 76.4
CSS0028225 Camellia sinensis var. sinensis HOM05D003525 ORTHO05D004578 7.7e-31 137.5 90 76.7
AUR62016732 Chenopodium quinoa HOM05D003525 ORTHO05D004578 7.7e-31 137.5 89 75.3
Manes.15G163700 Manihot esculenta HOM05D003525 ORTHO05D004578 7.7e-31 137.5 90 74.4
Migut.N01237 Erythranthe guttata HOM05D003525 ORTHO05D004578 1.0e-30 137.1 89 76.4
Gohir.D13G033000 Gossypium hirsutum HOM05D003525 ORTHO05D004578 1.0e-30 137.1 89 76.4
Gorai.013G037400 Gossypium raimondii HOM05D003525 ORTHO05D004578 1.0e-30 137.1 89 76.4
HanXRQChr10g0307161 Helianthus annuus HOM05D003525 ORTHO05D004578 1.0e-30 137.1 90 76.7
THA.LOC104807320 Tarenaya hassleriana HOM05D003525 ORTHO05D004578 1.0e-30 137.1 90 74.4
CAN.G1412.2 Capsicum annuum HOM05D003525 ORTHO05D004578 1.3e-30 136.7 89 73.0
CsaV3_7G023520 Cucumis sativus L. HOM05D003525 ORTHO05D004578 1.3e-30 136.7 90 75.6
Aa31LG8G13620 Aethionema arabicum HOM05D003525 ORTHO05D004578 1.7e-30 136.3 90 73.3
EL10Ac9g21728 Beta vulgaris HOM05D003525 ORTHO05D004578 1.7e-30 136.3 89 74.2
Sopen01g051770 Solanum pennellii HOM05D003525 ORTHO05D004578 1.7e-30 136.3 89 73.0
GSVIVG01031961001 Vitis vinifera HOM05D003525 ORTHO05D004578 1.7e-30 136.3 86 76.7
Sabra04G0102300 Salix brachista HOM05D003525 ORTHO05D004578 2.2e-30 136.0 90 75.6
CDE07G1879 Ceratophyllum demersum HOM05D003525 ORTHO05D004578 2.9e-30 135.6 90 73.3
Glyma.12G043700 Glycine max HOM05D003525 ORTHO05D004578 2.9e-30 135.6 90 74.4
Gohir.A13G034600 Gossypium hirsutum HOM05D003525 ORTHO05D004578 2.9e-30 135.6 89 75.3
Solyc01g109580.4 Solanum lycopersicum HOM05D003525 ORTHO05D004578 2.9e-30 135.6 89 73.0
Lsat_1_v5_gn_5_118620 Lactuca sativa HOM05D003525 ORTHO05D004578 3.8e-30 135.2 82 81.7
Lalb_Chr23g0265401 Lupinus albus HOM05D003525 ORTHO05D004578 3.8e-30 135.2 89 74.2
Sp7g32280 Schrenkiella parvula HOM05D003525 ORTHO05D004578 3.8e-30 135.2 89 74.2
Thhalv10025082m.g Eutrema salsugineum HOM05D003525 ORTHO05D004578 5.0e-30 134.8 90 73.3
Phvul.011G045700 Phaseolus vulgaris HOM05D003525 ORTHO05D004578 5.0e-30 134.8 90 75.6
Os03g0722600 Oryza sativa ssp. japonica HOM05D003525 ORTHO05D004578 6.5e-30 134.4 90 73.3
Ah.01g019420 Amaranthus hybridus HOM05D003525 ORTHO05D004578 8.5e-30 134.0 86 75.6
arahy.Tifrunner.gnm1.ann1.19SFKA Arachis hypogaea HOM05D003525 ORTHO05D004578 8.5e-30 134.0 90 73.3
arahy.Tifrunner.gnm1.ann1.PLG8VX Arachis hypogaea HOM05D003525 ORTHO05D004578 8.5e-30 134.0 90 73.3
HPP92_017152 Vanilla planifolia HOM05D003525 ORTHO05D004578 8.5e-30 134.0 89 70.8
AT4G34490 Arabidopsis thaliana HOM05D003525 ORTHO05D004578 1.1e-29 133.7 90 72.2
BcaB03g11830 Brassica carinata HOM05D003525 ORTHO05D004578 1.1e-29 133.7 90 72.2
A08p16780 Brassica napus HOM05D003525 ORTHO05D004578 1.1e-29 133.7 90 72.2
C03p85740 Brassica napus HOM05D003525 ORTHO05D004578 1.1e-29 133.7 90 72.2
BolC3t20862H Brassica oleracea HOM05D003525 ORTHO05D004578 1.1e-29 133.7 90 72.2
BraA08t33643Z Brassica rapa HOM05D003525 ORTHO05D004578 1.1e-29 133.7 90 72.2
AUR62011328 Chenopodium quinoa HOM05D003525 ORTHO05D004578 1.1e-29 133.7 87 75.9
MELO3C020978.2 Cucumis melo HOM05D003525 ORTHO05D004578 1.1e-29 133.7 90 74.4
CsaV3_2G014670 Cucumis sativus L. HOM05D003525 ORTHO05D004578 1.1e-29 133.7 90 74.4
Lj1g0027431 Lotus japonicus HOM05D003525 ORTHO05D004578 1.1e-29 133.7 90 74.4
SGA_v2.0_scaffold58G20536 Striga asiatica HOM05D003525 ORTHO05D004578 1.4e-29 133.3 90 74.4
AL7G16740 Arabidopsis lyrata HOM05D003525 ORTHO05D004578 1.9e-29 132.9 90 72.2
A01p03970 Brassica napus HOM05D003525 ORTHO05D004578 1.9e-29 132.9 90 72.2
C01p04280 Brassica napus HOM05D003525 ORTHO05D004578 1.9e-29 132.9 90 72.2
BolC1t00417H Brassica oleracea HOM05D003525 ORTHO05D004578 1.9e-29 132.9 90 72.2
BraA01t00384Z Brassica rapa HOM05D003525 ORTHO05D004578 1.9e-29 132.9 90 72.2
Carub.0007s0581 Capsella rubella HOM05D003525 ORTHO05D004578 1.9e-29 132.9 90 72.2
CARHR242770 Cardamine hirsuta HOM05D003525 ORTHO05D004578 1.9e-29 132.9 90 74.4
PSO675G1462 Papaver somniferum HOM05D003525 ORTHO05D004578 1.9e-29 132.9 90 75.6
RcHm_v2.0_Chr6g0264151 Rosa chinensis HOM05D003525 ORTHO05D004578 1.9e-29 132.9 89 69.7
FAN20G1110 Fragaria x ananassa HOM05D003525 ORTHO05D004578 2.5e-29 132.5 89 69.7
Lj5A197T61 Lonicera japonica HOM05D003525 ORTHO05D004578 2.5e-29 132.5 89 69.7
Sc18g0004490 Simmondsia chinensis HOM05D003525 ORTHO05D004578 2.5e-29 132.5 89 71.9
Oeu020764.1 Olea europaea HOM05D003525 ORTHO05D004578 3.2e-29 132.1 113 61.9
BcaC01g00903 Brassica carinata HOM05D003525 ORTHO05D004578 4.2e-29 131.7 90 71.1
Os08g0447900 Oryza sativa ssp. japonica HOM05D003525 ORTHO05D004578 4.2e-29 131.7 89 70.8
PSO541G1852 Papaver somniferum HOM05D003525 ORTHO05D004578 4.2e-29 131.7 90 75.6
Sed0027089 Sechium edule HOM05D003525 ORTHO05D004578 4.2e-29 131.7 90 72.2
BcaNung06262 Brassica carinata HOM05D003525 ORTHO05D004578 5.5e-29 131.3 90 71.1
DCAR_028988 Daucus carota HOM05D003525 ORTHO05D004578 5.5e-29 131.3 90 68.9
FAN24G2203 Fragaria x ananassa HOM05D003525 ORTHO05D004578 5.5e-29 131.3 89 69.7
Peaxi162Scf00016g00826 Petunia axillaris HOM05D003525 ORTHO05D004578 5.5e-29 131.3 85 75.3
SMO174G0095 Selaginella moellendorffii HOM05D003525 ORTHO05D004578 5.5e-29 131.3 90 71.1
unitig_22.g5174 Utricularia gibba HOM05D003525 ORTHO05D004578 5.5e-29 131.3 87 71.3
unitig_8.g3568 Utricularia gibba HOM05D003525 ORTHO05D004578 5.5e-29 131.3 90 71.1
FvH4_2g08710 Fragaria vesca HOM05D003525 ORTHO05D004578 7.2e-29 131.0 89 68.5
Hund06230 Selenicereus undatus HOM05D003525 ORTHO05D004578 7.2e-29 131.0 89 71.9
FAN27G1229 Fragaria x ananassa HOM05D003525 ORTHO05D004578 9.4e-29 130.6 89 68.5
Psat7g184520 Pisum sativum HOM05D003525 ORTHO05D004578 9.4e-29 130.6 90 72.2
Ca_20867_v3 Cicer arietinum L. HOM05D003525 ORTHO05D004578 1.2e-28 130.2 90 72.2
Migut.B00240 Erythranthe guttata HOM05D003525 ORTHO05D004578 1.2e-28 130.2 86 75.6
SEGI_09930 Sequoiadendron giganteum HOM05D003525 ORTHO05D004578 1.2e-28 130.2 90 71.1
arahy.Tifrunner.gnm1.ann1.92AS0N Arachis hypogaea HOM05D003525 ORTHO05D004578 1.6e-28 129.8 87 74.7
HanXRQChr04g0127991 Helianthus annuus HOM05D003525 ORTHO05D004578 1.6e-28 129.8 90 70.0
arahy.Tifrunner.gnm1.ann1.WSY56D Arachis hypogaea HOM05D003525 ORTHO05D004578 2.1e-28 129.4 87 74.7
Sed0019550 Sechium edule HOM05D003525 ORTHO05D004578 2.1e-28 129.4 90 75.6
PGR142G1190 Punica granatum HOM05D003525 ORTHO05D004578 3.6e-28 128.6 90 73.3
Zm00001eb040800 Zea mays HOM05D003525 ORTHO05D004578 6.1e-28 127.9 89 68.5
Gohir.A03G194200 Gossypium hirsutum HOM05D003525 ORTHO05D004578 8.0e-28 127.5 89 71.9
Gohir.D02G215300 Gossypium hirsutum HOM05D003525 ORTHO05D004578 8.0e-28 127.5 89 71.9
Gorai.005G243200 Gossypium raimondii HOM05D003525 ORTHO05D004578 8.0e-28 127.5 89 71.9
VMungo1127G1959 Vigna mungo HOM05D003525 ORTHO05D004578 1.4e-27 126.7 90 71.1
ECA236G3498 Erigeron canadensis HOM05D003525 ORTHO05D004578 1.8e-27 126.3 88 69.3
Nitab4.5_0001361g0240 Nicotiana tabacum HOM05D003525 ORTHO05D004578 1.8e-27 126.3 78 80.8
Lsat_1_v5_gn_7_89340 Lactuca sativa HOM05D003525 ORTHO05D004578 3.9e-27 125.2 88 68.2
Mapoly0074s0004 Marchantia polymorpha HOM05D003525 ORTHO05D004578 2.0e-26 122.9 87 70.1
Medtr4g069960 Medicago truncatula HOM05D003525 ORTHO05D004578 4.4e-26 121.7 90 67.8
HanXRQChr16g0505731 Helianthus annuus HOM05D003525 ORTHO05D004578 9.7e-26 120.6 88 68.2
FAN15G1113 Fragaria x ananassa HOM05D003525 ORTHO05D004578 1.3e-25 120.2 78 71.8
Aa31LG2G16030 Aethionema arabicum HOM05D003525 ORTHO05D004578 3.7e-25 118.6 90 67.8
Pp3c4_1720 Physcomitrium patens HOM05D003525 ORTHO05D004578 1.2e-23 113.6 88 64.8
MBI16_g38644_MAGBIO Magnolia biondii HOM05D003525 ORTHO05D004578 2.6e-23 112.5 67 82.1
MELO3C012526.2 Cucumis melo HOM05D003525 ORTHO05D004578 1.5e-21 106.7 86 65.1
CBR_g21060 Chara braunii HOM05D003525 ORTHO05D004578 2.5e-21 105.9 79 63.3
MCO10G181 Micromonas commoda HOM05D003525 ORTHO05D004578 3.6e-20 102.1 89 53.9
PRCOL_00002324 Prasinoderma coloniale HOM05D003525 ORTHO05D004578 2.4e-16 89.4 81 54.3
Actinidia08229 Actinidia chinensis HOM05D003525 ORTHO05D019487 4.2e-13 78.6 59 64.4
Cre06.g304100 Chlamydomonas reinhardtii HOM05D003525 ORTHO05D004578 2.6e-10 69.3 83 41.0
A03p62940 Brassica napus HOM05D003525 ORTHO05D019487 9.8e-10 67.4 47 66.0
BraA03t15369Z Brassica rapa HOM05D003525 ORTHO05D019487 9.8e-10 67.4 47 66.0
TPR.G14489 Trifolium pratense HOM05D003525 ORTHO05D004578 1.8e-08 63.2 53 60.4
Cfa027286 Carpinus fangiana HOM05D003525 ORTHO05D121739 2.0e-07 59.7 87 32.2
Nn5g31006 Nelumbo nucifera HOM05D004142 ORTHO05D005411 5.9e-07 58.2 33 84.8
MBI16_g36558_MAGBIO Magnolia biondii HOM05D003525 ORTHO05D004578 2.3e-06 56.2 86 46.5
C07p60610 Brassica napus HOM05D003525 ORTHO05D019487 8.6e-06 54.3 36 75.0
BolC7t46490H Brassica oleracea HOM05D003525 ORTHO05D019487 8.6e-06 54.3 36 75.0
Eucgr.G01885 Eucalyptus grandis HOM05D004142 ORTHO05D005411 8.6e-06 54.3 75 40.0


User provided reference genes

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