Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g12749 Nelumbo nucifera HOM05D007702 ORTHO05D009736 4.2e-162 574.7 306 100.0
TAR383G0542 Trochodendron aralioides HOM05D007702 ORTHO05D009736 6.9e-72 275.0 296 55.1
MBI07_g12934_MAGBIO Magnolia biondii HOM05D007702 ORTHO05D009736 5.7e-66 255.4 193 68.9
CDE05G1247 Ceratophyllum demersum HOM05D007702 ORTHO05D009736 5.1e-51 205.7 197 57.9
Haze_08173 Corylus avellana HOM05D007702 ORTHO05D009736 5.1e-51 205.7 205 53.2
CSS0020400 Camellia sinensis var. sinensis HOM05D007702 ORTHO05D009736 6.7e-51 205.3 202 53.5
Ah.08g217790 Amaranthus hybridus HOM05D007702 ORTHO05D009736 1.1e-50 204.5 178 59.0
Peaxi162Scf00051g00198 Petunia axillaris HOM05D007702 ORTHO05D009736 2.0e-50 203.8 162 64.8
PGR042G2668 Punica granatum HOM05D007702 ORTHO05D009736 9.7e-50 201.4 163 63.2
Manes.06G177600 Manihot esculenta HOM05D007702 ORTHO05D009736 2.2e-49 200.3 184 56.0
Cfa012496 Carpinus fangiana HOM05D007702 ORTHO05D009736 2.8e-49 199.9 205 52.2
CiPaw.11G097300 Carya illinoinensis HOM05D007702 ORTHO05D009736 2.8e-49 199.9 188 57.4
Solyc01g102860.2 Solanum lycopersicum HOM05D007702 ORTHO05D009736 3.7e-49 199.5 173 60.7
AUR62001339 Chenopodium quinoa HOM05D007702 ORTHO05D009736 6.3e-49 198.7 132 67.4
Aqoxy7G02739 Aquilegia oxysepala HOM05D007702 ORTHO05D009736 1.1e-48 198.0 162 59.9
EL10Ac7g18156 Beta vulgaris HOM05D007702 ORTHO05D009736 1.4e-48 197.6 149 65.8
Nitab4.5_0010634g0010 Nicotiana tabacum HOM05D007702 ORTHO05D009736 2.4e-48 196.8 148 67.6
Duzib235G0870 Durio zibethinus HOM05D007702 ORTHO05D009736 3.1e-48 196.4 182 56.6
Nitab4.5_0006053g0030 Nicotiana tabacum HOM05D007702 ORTHO05D009736 4.1e-48 196.1 119 77.3
Sopen01g045260 Solanum pennellii HOM05D007702 ORTHO05D009736 4.1e-48 196.1 184 57.1
MD09G1165300 Malus domestica HOM05D007702 ORTHO05D009736 6.9e-48 195.3 167 61.7
Potri.008G004800 Populus trichocarpa HOM05D007702 ORTHO05D009736 2.0e-47 193.7 173 59.0
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 2.6e-47 193.4 184 57.6
PGSC0003DMG400018255 Solanum tuberosum HOM05D007702 ORTHO05D009736 2.6e-47 193.4 196 54.6
Ciclev10032212m.g Citrus clementina HOM05D007702 ORTHO05D009736 3.4e-47 193.0 160 60.6
Cc03_g07590 Coffea canephora HOM05D007702 ORTHO05D009736 4.5e-47 192.6 185 55.1
Sabra08G0002400 Salix brachista HOM05D007702 ORTHO05D009736 2.2e-46 190.3 218 50.9
AUR62025666 Chenopodium quinoa HOM05D007702 ORTHO05D009736 1.9e-45 187.2 139 62.6
Ca_00991_v3 Cicer arietinum L. HOM05D007702 ORTHO05D009736 3.2e-45 186.4 117 70.1
A06p02690 Brassica napus HOM05D007702 ORTHO05D009736 4.2e-45 186.0 180 56.7
Prupe.3G023000 Prunus persica HOM05D007702 ORTHO05D009736 4.2e-45 186.0 157 61.8
BcaB07g33554 Brassica carinata HOM05D007702 ORTHO05D009736 7.2e-45 185.3 180 53.9
Migut.I01200 Erythranthe guttata HOM05D007702 ORTHO05D009736 9.4e-45 184.9 154 60.4
CANSAT54G1387 Cannabis sativa HOM05D007702 ORTHO05D009736 1.6e-44 184.1 153 61.4
BcaC08g43279 Brassica carinata HOM05D007702 ORTHO05D009736 2.1e-44 183.7 123 72.4
C06p06290 Brassica napus HOM05D007702 ORTHO05D009736 2.1e-44 183.7 123 72.4
BolC6t35738H Brassica oleracea HOM05D007702 ORTHO05D009736 2.1e-44 183.7 123 72.4
Carub.0001s3998 Capsella rubella HOM05D007702 ORTHO05D009736 2.1e-44 183.7 136 66.9
Thecc.06G057000 Theobroma cacao HOM05D007702 ORTHO05D009736 2.1e-44 183.7 198 52.5
BraA06t23478Z Brassica rapa HOM05D007702 ORTHO05D009736 3.6e-44 183.0 180 55.6
CANSAT54G2309 Cannabis sativa HOM05D007702 ORTHO05D009736 3.6e-44 183.0 153 61.4
AT1G51080 Arabidopsis thaliana HOM05D007702 ORTHO05D009736 4.7e-44 182.6 130 70.8
DCAR_007958 Daucus carota HOM05D007702 ORTHO05D009736 4.7e-44 182.6 160 55.6
Eucgr.J03180 Eucalyptus grandis HOM05D007702 ORTHO05D009736 1.0e-43 181.4 124 67.7
Gohir.D10G002100 Gossypium hirsutum HOM05D007702 ORTHO05D009736 1.4e-43 181.0 209 47.8
Gorai.011G002500 Gossypium raimondii HOM05D007702 ORTHO05D009736 1.4e-43 181.0 179 50.8
CARHR041100 Cardamine hirsuta HOM05D007702 ORTHO05D009736 1.8e-43 180.6 136 66.2
AL1G58880 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 2.3e-43 180.3 130 70.0
Aa31LG10G3400 Aethionema arabicum HOM05D007702 ORTHO05D009736 3.0e-43 179.9 173 56.6
Cpa.g.sc155.12 Carica papaya HOM05D007702 ORTHO05D009736 3.9e-43 179.5 144 59.7
Gohir.A10G002000 Gossypium hirsutum HOM05D007702 ORTHO05D009736 6.7e-43 178.7 209 46.9
RcHm_v2.0_Chr2g0149381 Rosa chinensis HOM05D007702 ORTHO05D009736 6.7e-43 178.7 133 63.9
Sp1g37800 Schrenkiella parvula HOM05D007702 ORTHO05D009736 6.7e-43 178.7 129 68.2
FvH4_6g36940 Fragaria vesca HOM05D007702 ORTHO05D009736 1.1e-42 177.9 119 70.6
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.1e-42 177.9 119 70.6
Thhalv10012117m.g Eutrema salsugineum HOM05D007702 ORTHO05D009736 1.5e-42 177.6 177 54.8
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.0e-42 177.2 119 70.6
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 4.4e-42 176.0 119 69.7
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 5.7e-42 175.6 144 62.5
Medtr2g101430 Medicago truncatula HOM05D007702 ORTHO05D009736 9.7e-42 174.9 132 62.9
arahy.Tifrunner.gnm1.ann1.TT2UX9 Arachis hypogaea HOM05D007702 ORTHO05D009736 2.8e-41 173.3 121 64.5
CAN.G2401.1 Capsicum annuum HOM05D000005 ORTHO05D000012 3.7e-41 172.9 116 68.1
TPR.G39495 Trifolium pratense HOM05D007702 ORTHO05D009736 4.8e-41 172.6 131 64.1
THA.LOC104817895 Tarenaya hassleriana HOM05D007702 ORTHO05D009736 8.2e-41 171.8 189 53.4
unitig_748.g7485 Utricularia gibba HOM05D007702 ORTHO05D009736 2.4e-40 170.2 222 46.8
GSVIVG01029550001 Vitis vinifera HOM05D007702 ORTHO05D009736 7.0e-40 168.7 133 60.2
PSO144G0036 Papaver somniferum HOM05D007702 ORTHO05D009736 1.2e-39 167.9 107 72.9
SGA_v2.0_scaffold71G23985 Striga asiatica HOM05D007702 ORTHO05D009736 1.2e-39 167.9 123 61.8
ClCG09G001650 Citrullus lanatus HOM05D007702 ORTHO05D009736 5.9e-39 165.6 172 54.1
Psat5g305320 Pisum sativum HOM05D007702 ORTHO05D009736 7.7e-39 165.2 128 60.9
MELO3C024282.2 Cucumis melo HOM05D007702 ORTHO05D009736 2.2e-38 163.7 119 64.7
CsaV3_7G033690 Cucumis sativus L. HOM05D007702 ORTHO05D009736 2.9e-38 163.3 119 63.0
Atru.chr1.2666 Acer truncatum HOM05D007702 ORTHO05D009736 3.8e-38 162.9 159 51.6
ATR1126G014 Amborella trichopoda HOM05D007702 ORTHO05D009736 1.9e-37 160.6 136 58.8
QL12p001257 Quercus lobata HOM05D007702 ORTHO05D009736 3.2e-37 159.8 106 68.9
Oeu049633.1 Olea europaea HOM05D007702 ORTHO05D009736 4.2e-37 159.5 130 60.0
COL.COLO4_31154 Corchorus olitorius HOM05D007702 ORTHO05D009736 9.4e-37 158.3 170 49.4
PSO423G0097 Papaver somniferum HOM05D007702 ORTHO05D009736 9.4e-37 158.3 112 66.1
Lsat_1_v5_gn_1_39381 Lactuca sativa HOM05D007702 ORTHO05D009736 1.5e-34 151.0 168 48.2
Aa31LG6G10000 Aethionema arabicum HOM05D007702 ORTHO05D009736 6.3e-33 145.6 126 58.7
vmacro18744 Vaccinium macrocarpon HOM05D007702 ORTHO05D009736 1.2e-31 141.4 120 54.2
SalBow6G4959 Salvia bowleyana HOM05D007702 ORTHO05D009736 1.6e-31 141.0 103 67.0
Pp3c5_18880 Physcomitrium patens HOM05D007702 ORTHO05D009736 1.3e-30 137.9 136 49.3
ECA236G1927 Erigeron canadensis HOM05D007702 ORTHO05D009736 3.8e-30 136.3 161 42.9
Os03g0138900 Oryza sativa ssp. japonica HOM05D007702 ORTHO05D009736 3.8e-30 136.3 134 50.0
Mapoly0020s0094 Marchantia polymorpha HOM05D007702 ORTHO05D009736 2.1e-28 130.6 119 51.3
Rhsim08G0250300 Rhododendron simsii HOM05D007702 ORTHO05D009736 3.6e-28 129.8 167 44.3
Gorai.011G091300 Gossypium raimondii HOM05D007702 ORTHO05D009736 6.1e-28 129.0 177 43.5
EL10Ac3g06847 Beta vulgaris HOM05D000495 ORTHO05D009736 8.8e-27 125.2 131 52.7
Aa31LG3G5120 Aethionema arabicum HOM05D007702 ORTHO05D009736 2.2e-25 120.6 150 49.3
AagrBONN_evm.TU.Sc2ySwM_228.5746 Anthoceros agrestis HOM05D007702 ORTHO05D009736 2.8e-25 120.2 128 48.4
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 5.4e-24 115.9 124 49.2
SEGI_14624 Sequoiadendron giganteum HOM05D007702 ORTHO05D009736 2.2e-22 110.5 123 49.6
Zm00001eb230260 Zea mays HOM05D007702 ORTHO05D009736 4.7e-20 102.8 117 45.3
FAN07G0391 Fragaria x ananassa HOM05D007702 ORTHO05D009736 2.2e-09 67.4 41 73.2
FAN10G3703 Fragaria x ananassa HOM05D007702 ORTHO05D009736 6.3e-09 65.9 46 60.9
Dinv37777 Davidia involucrata HOM05D000532 ORTHO05D002745 8.3e-09 65.5 34 85.3
AL3G14490 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 7.0e-08 62.4 51 58.8
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 5.9e-07 59.3 71 49.3
FAN02G1843 Fragaria x ananassa HOM05D007702 ORTHO05D009736 8.6e-06 55.5 41 61.0


User provided reference genes

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