Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g12663 Nelumbo nucifera HOM05D000087 ORTHO05D274444 4.7e-100 367.9 185 100.0
Nn4g25083 Nelumbo nucifera HOM05D000087 ORTHO05D030209 3.9e-46 188.7 159 66.7
Nn5g28455 Nelumbo nucifera HOM05D000087 ORTHO05D002585 1.9e-40 169.9 157 65.0
Nn3g21657 Nelumbo nucifera HOM05D000087 ORTHO05D030209 1.2e-34 150.6 142 62.0
Nn1g08942 Nelumbo nucifera HOM05D000087 ORTHO05D002585 6.1e-23 111.7 152 50.0
MBI05_g35177_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D002585 1.8e-14 83.6 142 40.1
TAR369G0098 Trochodendron aralioides HOM05D000087 ORTHO05D002585 1.2e-13 80.9 162 37.0
TAR376G0139 Trochodendron aralioides HOM05D000087 ORTHO05D002585 2.0e-13 80.1 149 33.6
TAR623G1462 Trochodendron aralioides HOM05D000087 ORTHO05D002585 2.0e-13 80.1 151 32.5
Cfa001424 Carpinus fangiana HOM05D000087 ORTHO05D002585 2.2e-12 76.6 161 36.6
Nn2g10255 Nelumbo nucifera HOM05D000087 ORTHO05D030209 1.1e-11 74.3 39 92.3
Nn2g11234 Nelumbo nucifera HOM05D000087 ORTHO05D002585 1.4e-11 73.9 158 38.0
LjContig00141g0015060 Lotus japonicus HOM05D000087 ORTHO05D002585 9.1e-11 71.2 151 32.5
Haze_17119 Corylus avellana HOM05D000087 ORTHO05D002585 1.2e-10 70.9 140 35.0
CsaV3_5G008400 Cucumis sativus L. HOM05D000087 ORTHO05D002585 1.6e-10 70.5 161 36.6
MELO3C023888.2 Cucumis melo HOM05D000087 ORTHO05D002585 2.7e-10 69.7 149 38.3
PSO339G2585 Papaver somniferum HOM05D000087 ORTHO05D002585 4.5e-10 68.9 151 33.1
AT5G06050 Arabidopsis thaliana HOM05D000087 ORTHO05D002585 5.9e-10 68.6 145 32.4
Glyma.11G222800 Glycine max HOM05D000087 ORTHO05D002585 7.7e-10 68.2 133 31.6
ClCG11G006660 Citrullus lanatus HOM05D000087 ORTHO05D002585 1.3e-09 67.4 139 33.8
MBI14_g32123_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D002585 1.3e-09 67.4 186 32.3
PSO513G0085 Papaver somniferum HOM05D000087 ORTHO05D002585 1.3e-09 67.4 170 32.4
TPR.G10329 Trifolium pratense HOM05D000087 ORTHO05D002585 1.3e-09 67.4 148 32.4
Glyma.18G034800 Glycine max HOM05D000087 ORTHO05D002585 1.7e-09 67.0 132 30.3
TWI38G2263 Tripterygium wilfordii HOM05D000087 ORTHO05D002585 2.3e-09 66.6 151 32.5
AL6G15980 Arabidopsis lyrata HOM05D000087 ORTHO05D002585 2.9e-09 66.2 145 31.0
CANSAT56G2358 Cannabis sativa HOM05D000087 ORTHO05D002585 2.9e-09 66.2 154 32.5
COL.COLO4_25493 Corchorus olitorius HOM05D000087 ORTHO05D002585 2.9e-09 66.2 143 36.4
Aqoxy6G00292 Aquilegia oxysepala HOM05D000087 ORTHO05D002585 3.8e-09 65.9 172 30.8
CARHR207180 Cardamine hirsuta HOM05D000087 ORTHO05D002585 5.0e-09 65.5 135 31.9
MELO3C008236.2 Cucumis melo HOM05D000087 ORTHO05D002585 5.0e-09 65.5 146 34.9
TWI15G0400 Tripterygium wilfordii HOM05D000087 ORTHO05D002585 5.0e-09 65.5 163 30.7
Duzib114G0831 Durio zibethinus HOM05D000087 ORTHO05D002585 1.1e-08 64.3 148 31.1
CANSAT80G1084 Cannabis sativa HOM05D000087 ORTHO05D002585 1.5e-08 63.9 144 39.6
CSS0048971 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 1.9e-08 63.5 156 31.4
Cpa.g.sc19.270 Carica papaya HOM05D000087 ORTHO05D002585 1.9e-08 63.5 166 38.0
CsaV3_6G001350 Cucumis sativus L. HOM05D000087 ORTHO05D002585 1.9e-08 63.5 144 29.2
Ah.16g102650 Amaranthus hybridus HOM05D000087 ORTHO05D002585 2.5e-08 63.2 130 31.5
Thecc.10G039400 Theobroma cacao HOM05D000087 ORTHO05D002585 2.5e-08 63.2 148 31.1
Phvul.001G236300 Phaseolus vulgaris HOM05D000087 ORTHO05D002585 3.2e-08 62.8 139 25.2
ClCG07G003600 Citrullus lanatus HOM05D000087 ORTHO05D002585 4.2e-08 62.4 153 35.9
Actinidia02919 Actinidia chinensis HOM05D000087 ORTHO05D002585 5.5e-08 62.0 159 30.2
Lalb_Chr04g0251021 Lupinus albus HOM05D000087 ORTHO05D002585 5.5e-08 62.0 123 32.5
Aqoxy2G02340 Aquilegia oxysepala HOM05D000087 ORTHO05D002585 7.2e-08 61.6 155 32.9
A10p30350 Brassica napus HOM05D000087 ORTHO05D002585 7.2e-08 61.6 126 35.7
Ca_08190_v3 Cicer arietinum L. HOM05D000087 ORTHO05D002585 7.2e-08 61.6 137 32.8
VMungo1383G2154 Vigna mungo HOM05D000087 ORTHO05D002585 7.2e-08 61.6 152 28.3
Migut.F01275 Erythranthe guttata HOM05D000087 ORTHO05D002585 9.5e-08 61.2 167 26.3
Sed0027798 Sechium edule HOM05D000087 ORTHO05D002585 9.5e-08 61.2 152 28.9
Lj1C943G10 Lonicera japonica HOM05D000087 ORTHO05D002585 1.2e-07 60.8 155 31.6
Lj8C79T5 Lonicera japonica HOM05D000087 ORTHO05D002585 1.2e-07 60.8 134 27.6
Sed0009848 Sechium edule HOM05D000087 ORTHO05D002585 1.2e-07 60.8 151 33.1
MSTRG.25352 Avicennia marina HOM05D000087 ORTHO05D038107 1.6e-07 60.5 134 31.3
CiPaw.01G291500 Carya illinoinensis HOM05D000087 ORTHO05D002585 1.6e-07 60.5 150 32.7
Hma1.2p1_0039F.1_g024520 Hydrangea macrophylla HOM05D000087 ORTHO05D002585 1.6e-07 60.5 172 30.2
Prupe.1G488500 Prunus persica HOM05D000087 ORTHO05D002585 1.6e-07 60.5 147 34.0
QL08p061339 Quercus lobata HOM05D000087 ORTHO05D002585 1.6e-07 60.5 153 30.7
PGSC0003DMG400027137 Solanum tuberosum HOM05D000087 ORTHO05D002585 1.6e-07 60.5 142 38.0
Sabra10G0153500 Salix brachista HOM05D000087 ORTHO05D002585 2.1e-07 60.1 148 31.1
unitig_61.g26161 Utricularia gibba HOM05D000087 ORTHO05D002585 2.1e-07 60.1 148 29.1
Gohir.D10G234800 Gossypium hirsutum HOM05D000087 ORTHO05D002585 3.6e-07 59.3 153 30.1
MD01G1139400 Malus domestica HOM05D000087 ORTHO05D002585 3.6e-07 59.3 147 32.7
BolC6t40161H Brassica oleracea HOM05D000087 ORTHO05D002585 4.7e-07 58.9 151 28.5
PSO384G3510 Papaver somniferum HOM05D000087 ORTHO05D002585 4.7e-07 58.9 134 30.6
SalBow6G6355 Salvia bowleyana HOM05D000087 ORTHO05D002585 4.7e-07 58.9 147 29.3
C06p51430 Brassica napus HOM05D000087 ORTHO05D002585 6.1e-07 58.5 152 29.6
Lsat_1_v5_gn_2_118160 Lactuca sativa HOM05D000087 ORTHO05D002585 6.1e-07 58.5 152 32.2
Lj6g0009259 Lotus japonicus HOM05D000087 ORTHO05D002585 6.1e-07 58.5 146 34.9
Hund13796 Selenicereus undatus HOM05D000087 ORTHO05D002585 6.1e-07 58.5 140 29.3
BraA10t45074Z Brassica rapa HOM05D000087 ORTHO05D002585 8.0e-07 58.2 128 33.6
Carub.0006s0491 Capsella rubella HOM05D000087 ORTHO05D002585 8.0e-07 58.2 152 34.2
Nitab4.5_0004074g0020 Nicotiana tabacum HOM05D000087 ORTHO05D002585 8.0e-07 58.2 124 33.1
SGA_v2.0_scaffold76G25144 Striga asiatica HOM05D000087 ORTHO05D002585 8.0e-07 58.2 142 32.4
MD15G1132900 Malus domestica HOM05D000087 ORTHO05D002585 1.4e-06 57.4 155 34.8
Nitab4.5_0008967g0010 Nicotiana tabacum HOM05D000087 ORTHO05D002585 1.4e-06 57.4 133 32.3
Solyc05g052970.4 Solanum lycopersicum HOM05D000087 ORTHO05D002585 1.4e-06 57.4 157 35.7
Gohir.A10G222500 Gossypium hirsutum HOM05D000087 ORTHO05D002585 1.8e-06 57.0 152 33.6
Sopen05g031490 Solanum pennellii HOM05D000087 ORTHO05D002585 1.8e-06 57.0 157 35.7
THA.LOC104808601 Tarenaya hassleriana HOM05D000087 ORTHO05D002585 1.8e-06 57.0 146 30.8
Actinidia33958 Actinidia chinensis HOM05D000087 ORTHO05D002585 2.3e-06 56.6 146 30.8
A07p42760 Brassica napus HOM05D000087 ORTHO05D002585 2.3e-06 56.6 152 30.9
Dinv27261 Davidia involucrata HOM05D000087 ORTHO05D002585 2.3e-06 56.6 146 30.8
Ah.10g037060 Amaranthus hybridus HOM05D000087 ORTHO05D002585 3.0e-06 56.2 145 31.7
Hma1.2p1_1732F.1_g299780 Hydrangea macrophylla HOM05D000087 ORTHO05D002585 3.0e-06 56.2 139 30.2
Manes.10G026200 Manihot esculenta HOM05D000087 ORTHO05D002585 3.0e-06 56.2 138 33.3
BcaC06g32311 Brassica carinata HOM05D000087 ORTHO05D002585 4.0e-06 55.8 135 31.9
BraA07t31802Z Brassica rapa HOM05D000087 ORTHO05D002585 4.0e-06 55.8 152 31.6
Duzib106G0748 Durio zibethinus HOM05D000087 ORTHO05D002585 4.0e-06 55.8 157 29.9
Psat5g124280 Pisum sativum HOM05D000087 ORTHO05D002585 4.0e-06 55.8 142 32.4
Potri.008G059500 Populus trichocarpa HOM05D000087 ORTHO05D002585 4.0e-06 55.8 146 28.1
Potri.010G199300 Populus trichocarpa HOM05D000087 ORTHO05D002585 4.0e-06 55.8 141 30.5
SalBow6G3650 Salvia bowleyana HOM05D000087 ORTHO05D002585 4.0e-06 55.8 156 27.6
THA.LOC104823130 Tarenaya hassleriana HOM05D000087 ORTHO05D002585 4.0e-06 55.8 135 30.4
Migut.F00747 Erythranthe guttata HOM05D000087 ORTHO05D002585 5.2e-06 55.5 156 31.4
Gohir.A05G347800 Gossypium hirsutum HOM05D000087 ORTHO05D002585 5.2e-06 55.5 143 28.7
Actinidia21270 Actinidia chinensis HOM05D000087 ORTHO05D002585 8.8e-06 54.7 136 30.1
ATR0559G309 Amborella trichopoda HOM05D000087 ORTHO05D002585 8.8e-06 54.7 156 30.8
Gorai.011G268400 Gossypium raimondii HOM05D000087 ORTHO05D002585 8.8e-06 54.7 153 29.4


User provided reference genes

Program Settings