Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 1.1e-206 723.0 347 100.0
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 9.4e-118 427.6 250 76.4
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 6.8e-116 421.4 324 66.4
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 2.0e-112 409.8 357 58.8
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 6.5e-111 404.8 268 72.0
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 1.5e-110 403.7 254 72.4
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 3.2e-110 402.5 277 69.0
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 9.4e-110 401.0 261 69.7
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.6e-109 400.2 250 72.8
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 1.6e-109 400.2 260 71.2
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 1.4e-108 397.1 258 70.9
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 1.4e-108 397.1 280 68.2
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 2.3e-108 396.4 248 73.0
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 3.0e-108 396.0 258 71.7
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 3.0e-108 396.0 260 68.8
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 4.0e-108 395.6 262 68.3
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 6.8e-108 394.8 260 69.2
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 8.8e-108 394.4 272 70.2
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 8.8e-108 394.4 260 68.5
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 1.2e-107 394.0 278 66.2
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 1.5e-107 393.7 250 71.6
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 2.0e-107 393.3 293 65.2
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 3.4e-107 392.5 284 63.4
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 3.4e-107 392.5 265 68.3
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 1.7e-106 390.2 250 71.2
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 6.3e-106 388.3 266 68.8
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 6.3e-106 388.3 260 69.6
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 8.3e-106 387.9 278 65.8
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 1.1e-105 387.5 273 68.9
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 3.1e-105 386.0 270 66.7
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 5.4e-105 385.2 256 68.8
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 5.4e-105 385.2 260 69.2
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 7.0e-105 384.8 248 71.0
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 9.1e-105 384.4 265 66.8
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 2.0e-104 383.3 260 66.5
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 4.5e-104 382.1 260 68.8
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 7.7e-104 381.3 264 64.8
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 6.6e-103 378.3 297 61.6
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 1.5e-102 377.1 264 64.4
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 1.5e-102 377.1 260 69.2
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 3.3e-102 375.9 285 63.2
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 1.6e-101 373.6 268 63.8
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 4.7e-101 372.1 256 67.2
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 6.1e-101 371.7 265 64.9
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 6.1e-101 371.7 303 58.1
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 1.4e-100 370.5 270 61.9
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 1.4e-100 370.5 249 66.7
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 2.3e-100 369.8 265 64.2
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 2.3e-100 369.8 259 68.0
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 8.9e-100 367.9 275 62.2
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 5.7e-99 365.2 259 62.5
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 2.2e-98 363.2 268 66.8
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 3.7e-98 362.5 250 67.2
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 3.7e-98 362.5 231 70.1
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 1.1e-97 360.9 284 60.9
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 2.4e-97 359.8 274 62.0
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 2.4e-97 359.8 258 65.5
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 3.2e-97 359.4 275 61.5
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 7.8e-96 354.8 269 65.8
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 1.7e-95 353.6 261 63.2
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 1.7e-95 353.6 261 63.2
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 3.9e-95 352.4 249 68.3
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 5.0e-95 352.1 270 61.1
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 6.6e-95 351.7 285 60.4
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 1.1e-94 350.9 254 64.2
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 1.1e-94 350.9 270 60.7
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 1.5e-94 350.5 278 59.7
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 2.5e-94 349.7 244 65.2
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 5.6e-94 348.6 270 60.0
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 2.1e-93 346.7 278 59.7
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 2.8e-93 346.3 246 62.6
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 3.2e-89 332.8 281 58.0
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 2.7e-88 329.7 261 61.7
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 6.6e-87 325.1 261 60.9
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 1.9e-86 323.6 262 62.6
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 4.7e-85 318.9 268 58.6
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 2.7e-80 303.1 264 57.6
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 1.3e-79 300.8 286 54.9
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 7.3e-78 295.0 261 55.9
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 2.1e-77 293.5 277 54.2
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 1.2e-75 287.7 202 63.9
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 4.7e-69 265.8 202 58.9
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 4.2e-65 252.7 252 52.8
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 1.7e-63 247.3 251 48.2
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 5.1e-63 245.7 278 45.0
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 2.8e-53 213.4 180 56.7
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 3.6e-53 213.0 160 61.9
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 9.0e-52 208.4 130 70.8
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 5.8e-51 205.7 305 37.7
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 9.3e-49 198.4 296 37.2
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 2.8e-45 186.8 128 70.3
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 1.1e-38 164.9 104 67.3
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 1.5e-35 154.5 109 59.6
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 5.5e-33 146.0 334 29.9
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 1.3e-31 141.4 129 58.1
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 8.7e-31 138.7 79 73.4
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 2.2e-29 134.0 79 75.9
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 4.2e-25 119.8 84 59.5
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 7.4e-22 109.0 65 70.8
Cpa.g.sc1009.2 Carica papaya HOM05D007092 ORTHO05D008947 1.4e-17 94.7 62 74.2
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 7.9e-16 89.0 67 64.2
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 7.9e-16 89.0 67 64.2
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 3.9e-15 86.7 49 71.4
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 3.9e-15 86.7 49 71.4
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 1.4e-12 78.2 63 52.4
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 9.1e-12 75.5 54 61.1
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 1.5e-11 74.7 58 56.9
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 1.5e-11 74.7 58 56.9
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 5.0e-10 69.7 62 45.2
SEGI_38624 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 3.2e-09 67.0 56 53.6
Actinidia21637 Actinidia chinensis HOM05D007092 ORTHO05D008947 4.2e-09 66.6 62 50.0
TAR627G0568 Trochodendron aralioides HOM05D000264 ORTHO05D000152 5.5e-09 66.2 55 58.2
Cpa.g.sc3948.1 Carica papaya HOM05D007092 ORTHO05D008947 2.7e-08 63.9 32 78.1
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 4.7e-08 63.2 42 59.5
SEGI_02665 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 1.0e-07 62.0 68 51.5
Hund18614 Selenicereus undatus HOM05D007092 ORTHO05D008947 3.3e-06 57.0 84 41.7
C03p03960 Brassica napus HOM05D000267 ORTHO05D020178 7.5e-06 55.8 49 53.1
BolC3t12933H Brassica oleracea HOM05D000267 ORTHO05D020178 7.5e-06 55.8 49 53.1


User provided reference genes

Program Settings