Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g12547 Nelumbo nucifera HOM05D011714 ORTHO05D011286 4.0e-41 171.0 88 100.0
Nn8g40235 Nelumbo nucifera HOM05D011714 ORTHO05D011286 1.9e-14 82.4 86 55.8
TAR383G0052 Trochodendron aralioides HOM05D011714 ORTHO05D011286 2.5e-11 72.0 86 43.0
QL02p095571 Quercus lobata HOM05D013360 ORTHO05D011286 5.3e-09 64.3 86 34.9
CiPaw.07G186400 Carya illinoinensis HOM05D011714 ORTHO05D011286 9.1e-09 63.5 87 39.1
CiPaw.08G040500 Carya illinoinensis HOM05D011714 ORTHO05D011286 2.0e-08 62.4 71 43.7
Haze_22172 Corylus avellana HOM05D011714 ORTHO05D011286 4.5e-08 61.2 86 38.4
COL.COLO4_06805 Corchorus olitorius HOM05D011714 ORTHO05D011286 8.5e-07 57.0 95 37.9
Thecc.09G160300 Theobroma cacao HOM05D011714 ORTHO05D011286 8.5e-07 57.0 81 42.0
CiPaw.05G147800 Carya illinoinensis HOM05D008443 ORTHO05D010587 1.4e-06 56.2 56 51.8
Manes.05G088700 Manihot esculenta HOM05D008443 ORTHO05D010587 1.4e-06 56.2 71 46.5
Aqoxy3G03049 Aquilegia oxysepala HOM05D008443 ORTHO05D010587 1.9e-06 55.8 82 39.0
Manes.01G198240 Manihot esculenta HOM05D008443 ORTHO05D010587 1.9e-06 55.8 58 48.3
CSS0001689 Camellia sinensis var. sinensis HOM05D008443 ORTHO05D010587 2.5e-06 55.5 71 46.5
Lalb_Chr02g0141791 Lupinus albus HOM05D006547 ORTHO05D008112 2.5e-06 55.5 66 39.4
MSTRG.2385 Avicennia marina HOM05D008443 ORTHO05D010587 3.2e-06 55.1 65 49.2
Aqoxy7G03244 Aquilegia oxysepala HOM05D011714 ORTHO05D011286 4.2e-06 54.7 54 51.9
ClCG11G012610 Citrullus lanatus HOM05D029983 ORTHO05D028921 4.2e-06 54.7 64 46.9
Gorai.009G343700 Gossypium raimondii HOM05D008443 ORTHO05D010587 4.2e-06 54.7 47 55.3
CDE07G0196 Ceratophyllum demersum HOM05D008443 ORTHO05D010587 5.5e-06 54.3 66 50.0
PGR031G3213 Punica granatum HOM05D001624 ORTHO05D001530 5.5e-06 54.3 63 42.9
QL03p061920 Quercus lobata HOM05D008443 ORTHO05D010587 5.5e-06 54.3 51 52.9
TAR633G2530 Trochodendron aralioides HOM05D001624 ORTHO05D001530 5.5e-06 54.3 89 33.7
Gohir.A05G318400 Gossypium hirsutum HOM05D008443 ORTHO05D010587 7.2e-06 53.9 50 52.0
Gohir.D04G086400 Gossypium hirsutum HOM05D011714 ORTHO05D011286 7.2e-06 53.9 82 41.5
Gohir.D05G320600 Gossypium hirsutum HOM05D008443 ORTHO05D010587 7.2e-06 53.9 47 55.3
Gorai.012G096300 Gossypium raimondii HOM05D011714 ORTHO05D011286 7.2e-06 53.9 82 41.5
Nn2g12542 Nelumbo nucifera HOM05D011714 ORTHO05D011286 9.4e-06 53.5 80 38.8
Thecc.09G160800 Theobroma cacao HOM05D016047 ORTHO05D011537 9.4e-06 53.5 76 39.5
Zm00001eb313520 Zea mays HOM05D036506 ORTHO05D050172 9.4e-06 53.5 81 38.3


User provided reference genes

Program Settings