Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.2e-88 329.7 158 100.0
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.2e-67 260.0 152 84.9
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 5.3e-60 234.6 152 73.7
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 5.3e-60 234.6 152 75.0
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 7.0e-60 234.2 152 75.0
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 7.0e-60 234.2 152 74.3
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 2.6e-59 232.3 152 74.3
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 2.6e-59 232.3 152 73.7
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 7.7e-59 230.7 151 72.2
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 1.0e-58 230.3 152 73.0
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 1.3e-58 229.9 152 73.0
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 2.9e-58 228.8 151 71.5
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 3.8e-58 228.4 152 69.7
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 2.5e-57 225.7 152 71.1
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 5.5e-57 224.6 152 71.7
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 7.2e-57 224.2 152 69.1
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 9.4e-57 223.8 151 72.2
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 2.1e-56 222.6 151 73.5
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 2.7e-56 222.2 152 71.1
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 3.6e-56 221.9 152 70.4
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 4.7e-56 221.5 157 68.8
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 6.1e-56 221.1 163 66.3
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 8.0e-56 220.7 152 69.1
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 8.0e-56 220.7 152 70.4
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 1.0e-55 220.3 151 67.5
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.8e-55 219.5 152 69.1
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 3.0e-55 218.8 152 69.1
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 4.0e-55 218.4 152 68.4
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 5.2e-55 218.0 151 68.2
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 6.7e-55 217.6 152 66.4
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 8.8e-55 217.2 157 66.9
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 1.1e-54 216.9 157 66.2
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 1.5e-54 216.5 157 66.2
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 2.0e-54 216.1 152 66.4
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 2.0e-54 216.1 152 69.7
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 2.0e-54 216.1 152 69.1
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 2.6e-54 215.7 152 67.1
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 5.7e-54 214.5 152 66.4
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 5.7e-54 214.5 157 66.2
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 9.7e-54 213.8 152 65.1
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 9.7e-54 213.8 152 69.7
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 9.7e-54 213.8 152 69.1
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 1.7e-53 213.0 155 66.5
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 1.7e-53 213.0 150 67.3
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 2.8e-53 212.2 152 66.4
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 4.8e-53 211.5 150 70.0
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 4.8e-53 211.5 150 70.0
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 6.3e-53 211.1 152 65.1
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 6.3e-53 211.1 153 68.0
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 1.4e-52 209.9 152 66.4
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 1.4e-52 209.9 152 67.1
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.4e-52 209.9 152 68.4
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 1.8e-52 209.5 152 67.8
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 2.4e-52 209.1 152 65.8
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 3.1e-52 208.8 152 66.4
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 7.0e-52 207.6 152 65.8
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.2e-51 206.8 152 63.2
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 1.6e-51 206.5 153 65.4
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 2.0e-51 206.1 153 64.7
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 2.0e-51 206.1 152 65.8
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 2.0e-51 206.1 150 64.0
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 3.5e-51 205.3 151 64.2
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 3.5e-51 205.3 151 66.2
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 3.5e-51 205.3 158 65.2
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 4.5e-51 204.9 152 62.5
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 4.5e-51 204.9 152 63.2
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 5.9e-51 204.5 153 64.1
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 5.9e-51 204.5 153 64.1
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 5.9e-51 204.5 153 64.1
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 5.9e-51 204.5 152 65.8
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 2.9e-50 202.2 152 61.8
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 2.9e-50 202.2 151 61.6
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 5.0e-50 201.4 151 61.6
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 5.0e-50 201.4 152 65.1
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 5.0e-50 201.4 152 61.8
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 1.1e-49 200.3 152 60.5
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 1.9e-49 199.5 152 60.5
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 3.2e-49 198.7 151 60.9
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 5.5e-49 198.0 151 62.9
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 9.4e-49 197.2 153 64.1
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 1.2e-48 196.8 155 62.6
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 1.2e-48 196.8 155 62.6
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 2.1e-48 196.1 153 61.4
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 2.1e-48 196.1 149 59.7
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 3.6e-48 195.3 152 58.6
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 1.8e-47 193.0 164 57.9
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 6.8e-47 191.0 152 57.9
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 8.8e-47 190.7 151 58.9
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 2.6e-46 189.1 153 58.2
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 5.7e-46 188.0 151 59.6
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 1.3e-45 186.8 152 60.5
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 1.7e-45 186.4 134 65.7
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 2.8e-45 185.7 152 60.5
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 3.7e-45 185.3 152 57.2
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 1.4e-44 183.3 152 59.9
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 1.6e-43 179.9 152 55.9
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 2.0e-43 179.5 132 64.4
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 2.0e-43 179.5 152 59.2
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 6.5e-42 174.5 126 66.7
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.3e-37 160.2 87 87.4
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 5.0e-34 148.3 93 72.0
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 1.9e-33 146.4 149 48.3
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 8.0e-32 141.0 131 58.0
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 5.7e-30 134.8 142 43.7
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.7e-29 133.3 129 43.4
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.1e-28 130.6 130 43.1
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 2.7e-27 125.9 94 63.8
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 5.6e-25 118.2 123 44.7
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 2.8e-24 115.9 85 63.5
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 2.4e-20 102.8 79 63.3
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 1.3e-18 97.1 64 71.9
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 5.0e-18 95.1 64 70.3
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 1.6e-16 90.1 117 35.9


User provided reference genes

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