Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 9.7e-72 273.5 148 100.0
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.4e-57 226.5 148 81.1
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 5.3e-54 214.5 148 79.1
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 5.7e-48 194.5 149 73.8
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 2.2e-47 192.6 150 72.0
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 7.0e-46 187.6 152 71.1
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 9.1e-46 187.2 149 71.8
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 2.9e-44 182.2 149 69.1
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 3.8e-44 181.8 148 72.3
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 1.9e-43 179.5 154 71.4
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 2.5e-43 179.1 152 72.4
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 3.3e-43 178.7 151 70.9
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 7.2e-43 177.6 154 69.5
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 9.5e-43 177.2 150 69.3
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 1.2e-42 176.8 152 72.4
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 2.1e-42 176.0 152 71.7
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 3.6e-42 175.3 148 70.9
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 6.1e-42 174.5 152 71.7
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 2.3e-41 172.6 157 67.5
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 2.3e-41 172.6 148 71.6
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.0e-41 171.8 151 67.5
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 4.0e-41 171.8 151 67.5
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 5.2e-41 171.4 156 66.0
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 8.9e-41 170.6 152 69.1
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 8.9e-41 170.6 151 67.5
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 8.9e-41 170.6 151 67.5
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.0e-40 169.5 148 65.5
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 2.6e-40 169.1 156 65.4
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 2.6e-40 169.1 153 69.9
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 5.7e-40 167.9 151 67.5
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 5.7e-40 167.9 151 67.5
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 5.7e-40 167.9 151 67.5
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 7.5e-40 167.5 153 69.3
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 7.5e-40 167.5 150 65.3
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 9.8e-40 167.2 152 65.8
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 9.8e-40 167.2 152 65.8
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.3e-39 166.8 149 65.1
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 1.3e-39 166.8 152 66.4
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 1.3e-39 166.8 152 66.4
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 1.3e-39 166.8 148 63.5
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 1.7e-39 166.4 152 68.4
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 1.7e-39 166.4 126 74.6
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 3.7e-39 165.2 151 66.2
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 3.7e-39 165.2 149 67.1
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 8.3e-39 164.1 151 67.5
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 8.3e-39 164.1 134 73.1
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 8.3e-39 164.1 124 75.8
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 8.3e-39 164.1 146 65.8
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 1.4e-38 163.3 152 65.8
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 1.4e-38 163.3 152 65.8
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 3.1e-38 162.2 152 65.8
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 7.0e-38 161.0 132 72.7
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 1.2e-37 160.2 125 72.0
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.2e-37 160.2 149 65.1
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 1.6e-37 159.8 155 65.8
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 4.5e-37 158.3 133 69.2
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 4.5e-37 158.3 151 62.9
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 5.9e-37 157.9 155 63.2
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 1.0e-36 157.1 123 73.2
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.3e-36 156.8 149 65.1
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 1.7e-36 156.4 150 66.7
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 1.7e-36 156.4 151 64.9
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 2.3e-36 156.0 150 66.0
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 5.0e-36 154.8 128 70.3
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 5.0e-36 154.8 147 61.2
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 8.6e-36 154.1 150 65.3
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 8.6e-36 154.1 141 65.2
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 1.1e-35 153.7 138 68.8
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 4.3e-35 151.8 150 64.7
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 4.3e-35 151.8 160 62.5
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 5.6e-35 151.4 123 69.1
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 5.6e-35 151.4 157 63.1
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 7.3e-35 151.0 144 64.6
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 2.1e-34 149.4 120 70.8
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 8.0e-34 147.5 143 64.3
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 1.8e-33 146.4 159 61.6
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 6.8e-33 144.4 153 62.7
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 5.8e-32 141.4 120 66.7
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 5.8e-32 141.4 120 66.7
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 5.8e-32 141.4 152 60.5
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 9.8e-32 140.6 120 65.8
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.7e-31 139.8 131 58.8
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 1.7e-31 139.8 152 59.9
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 2.2e-31 139.4 154 61.7
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 2.2e-31 139.4 158 57.6
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 2.9e-31 139.0 146 58.9
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 3.7e-31 138.7 143 58.7
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 4.9e-31 138.3 128 63.3
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 4.9e-31 138.3 146 62.3
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 4.9e-31 138.3 149 61.7
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 6.4e-31 137.9 144 60.4
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 1.1e-30 137.1 152 57.2
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 1.4e-30 136.7 141 58.9
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 1.9e-30 136.3 156 56.4
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.2e-29 133.7 84 82.1
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 1.2e-29 133.7 144 58.3
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 1.6e-29 133.3 143 59.4
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 2.0e-29 132.9 143 59.4
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 2.7e-29 132.5 152 58.6
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 2.7e-29 132.5 143 58.7
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 1.0e-28 130.6 117 67.5
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.3e-28 130.2 143 56.6
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 3.0e-28 129.0 152 55.9
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 8.6e-28 127.5 70 92.9
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 2.5e-27 125.9 70 91.4
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 7.3e-27 124.4 131 65.6
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 2.1e-26 122.9 133 58.6
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 2.8e-26 122.5 87 74.7
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 4.7e-26 121.7 137 61.3
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 8.0e-26 120.9 141 58.2
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 1.9e-19 99.8 225 39.6
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 7.3e-19 97.8 79 63.3
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 1.6e-18 96.7 73 69.9
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 2.1e-18 96.3 86 59.3
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 6.2e-18 94.7 67 73.1
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 1.1e-17 94.0 127 48.8
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 1.4e-17 93.6 102 60.8
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 8.9e-17 90.9 124 55.6
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 2.4e-14 82.8 111 52.3
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 1.2e-10 70.5 102 49.0
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 2.1e-10 69.7 159 39.0
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 5.2e-09 65.1 64 50.0
Cfa020782 Carpinus fangiana HOM05D006256 ORTHO05D007833 1.2e-08 63.9 93 49.5
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 2.6e-08 62.8 97 50.5
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 1.3e-07 60.5 48 75.0
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 6.4e-07 58.2 64 46.9
Sed0004136 Sechium edule HOM05D006256 ORTHO05D007833 8.4e-07 57.8 89 49.4


User provided reference genes

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