Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g10204 Nelumbo nucifera HOM05D001655 ORTHO05D001567 6.7e-14 79.3 37 100.0
Nn2g12455 Nelumbo nucifera HOM05D001655 ORTHO05D001567 6.7e-14 79.3 37 100.0
Manes.08G097000 Manihot esculenta HOM05D001655 ORTHO05D001567 3.7e-12 73.6 36 97.2
TAR623G0971 Trochodendron aralioides HOM05D001655 ORTHO05D001567 3.7e-12 73.6 36 97.2
Actinidia13012 Actinidia chinensis HOM05D001655 ORTHO05D001567 8.2e-12 72.4 36 94.4
Cfa017114 Carpinus fangiana HOM05D001655 ORTHO05D001567 1.1e-11 72.0 36 94.4
CDE04G2421 Ceratophyllum demersum HOM05D001655 ORTHO05D001567 1.1e-11 72.0 36 94.4
CDE07G1674 Ceratophyllum demersum HOM05D001655 ORTHO05D001567 1.1e-11 72.0 36 94.4
Duzib093G1547 Durio zibethinus HOM05D001655 ORTHO05D001567 1.1e-11 72.0 36 94.4
Glyma.01G126000 Glycine max HOM05D001655 ORTHO05D001567 1.1e-11 72.0 36 94.4
Glyma.U031805 Glycine max HOM05D001655 ORTHO05D001567 1.1e-11 72.0 36 94.4
Gohir.A01G230000 Gossypium hirsutum HOM05D001655 ORTHO05D001567 1.1e-11 72.0 36 94.4
Gohir.D01G219900 Gossypium hirsutum HOM05D001655 ORTHO05D001567 1.1e-11 72.0 36 94.4
Lj1g0013561 Lotus japonicus HOM05D001655 ORTHO05D001567 1.1e-11 72.0 36 94.4
Lj3g0012119 Lotus japonicus HOM05D001655 ORTHO05D001567 1.1e-11 72.0 36 94.4
Lj3g0013309 Lotus japonicus HOM05D001655 ORTHO05D001567 1.1e-11 72.0 36 94.4
Thecc.05G006800 Theobroma cacao HOM05D001655 ORTHO05D001567 1.1e-11 72.0 36 94.4
Dinv12167 Davidia involucrata HOM05D001655 ORTHO05D001567 1.4e-11 71.6 36 94.4
MD04G1166600 Malus domestica HOM05D001655 ORTHO05D001567 1.4e-11 71.6 36 94.4
Manes.09G111500 Manihot esculenta HOM05D001655 ORTHO05D001567 1.4e-11 71.6 36 94.4
Prupe.6G284800 Prunus persica HOM05D001655 ORTHO05D001567 1.4e-11 71.6 36 94.4
Atru.chr8.2335 Acer truncatum HOM05D001655 ORTHO05D001567 1.8e-11 71.2 36 94.4
CiPaw.09G215300 Carya illinoinensis HOM05D001655 ORTHO05D001567 2.4e-11 70.9 36 91.7
RcHm_v2.0_Chr3g0461621 Rosa chinensis HOM05D001655 ORTHO05D001567 2.4e-11 70.9 36 91.7
Actinidia11550 Actinidia chinensis HOM05D001655 ORTHO05D001567 3.1e-11 70.5 36 91.7
Actinidia32544 Actinidia chinensis HOM05D001655 ORTHO05D001567 3.1e-11 70.5 36 91.7
Lalb_Chr12g0207291 Lupinus albus HOM05D001655 ORTHO05D001567 3.1e-11 70.5 37 86.5
Phvul.008G092500 Phaseolus vulgaris HOM05D001655 ORTHO05D001567 3.1e-11 70.5 36 88.9
CSS0037641 Camellia sinensis var. sinensis HOM05D001655 ORTHO05D001567 4.1e-11 70.1 37 86.5
Sed0013352 Sechium edule HOM05D001655 ORTHO05D001567 4.1e-11 70.1 36 88.9
TPR.G5213 Trifolium pratense HOM05D001655 ORTHO05D001567 4.1e-11 70.1 36 88.9
Cc11_g05490 Coffea canephora HOM05D001655 ORTHO05D001567 9.1e-11 68.9 36 88.9
TWI53G0443 Tripterygium wilfordii HOM05D001655 ORTHO05D001567 9.1e-11 68.9 36 88.9
Ca_13500_v3 Cicer arietinum L. HOM05D001655 ORTHO05D001567 1.2e-10 68.6 36 91.7
Hma1.2p1_0501F.1_g167370 Hydrangea macrophylla HOM05D001655 ORTHO05D001567 1.2e-10 68.6 36 86.1
Nitab4.5_0000355g0190 Nicotiana tabacum HOM05D001655 ORTHO05D001567 2.0e-10 67.8 36 88.9
Sopen10g027980 Solanum pennellii HOM05D001655 ORTHO05D000343 2.6e-10 67.4 36 88.9
Cc06_g00750 Coffea canephora HOM05D001655 ORTHO05D001567 3.4e-10 67.0 36 88.9
Nitab4.5_0003850g0010 Nicotiana tabacum HOM05D001655 ORTHO05D001567 3.4e-10 67.0 36 88.9
Oeu026976.1 Olea europaea HOM05D001655 ORTHO05D001567 3.4e-10 67.0 36 88.9
Potri.006G104500 Populus trichocarpa HOM05D001655 ORTHO05D001567 3.4e-10 67.0 36 86.1
THA.LOC104816181 Tarenaya hassleriana HOM05D001655 ORTHO05D001567 3.4e-10 67.0 36 88.9
Atru.chr1.94 Acer truncatum HOM05D001655 ORTHO05D001567 4.5e-10 66.6 36 88.9
MSTRG.5541 Avicennia marina HOM05D001655 ORTHO05D001567 4.5e-10 66.6 36 88.9
BcaB01g06244 Brassica carinata HOM05D001655 ORTHO05D001567 4.5e-10 66.6 36 86.1
ECA236G0256 Erigeron canadensis HOM05D001655 ORTHO05D001567 4.5e-10 66.6 36 86.1
Potri.016G126600 Populus trichocarpa HOM05D001655 ORTHO05D001567 4.5e-10 66.6 36 86.1
Aa31LG1G23270 Aethionema arabicum HOM05D001655 ORTHO05D001567 5.9e-10 66.2 36 86.1
Eucgr.K02210 Eucalyptus grandis HOM05D001655 ORTHO05D001567 5.9e-10 66.2 36 86.1
BcaB01g06111 Brassica carinata HOM05D001655 ORTHO05D001567 7.7e-10 65.9 36 83.3
VMungo0331G1605 Vigna mungo HOM05D001655 ORTHO05D001567 7.7e-10 65.9 36 83.3
Thhalv10015051m.g Eutrema salsugineum HOM05D001655 ORTHO05D001567 1.0e-09 65.5 36 83.3
Sp6g40910 Schrenkiella parvula HOM05D001655 ORTHO05D001567 1.0e-09 65.5 36 83.3
CAN.G1225.4 Capsicum annuum HOM05D001655 ORTHO05D001567 1.3e-09 65.1 36 83.3
Peaxi162Scf00264g00841 Petunia axillaris HOM05D001655 ORTHO05D001567 1.3e-09 65.1 36 86.1
HPP92_001130 Vanilla planifolia HOM05D001655 ORTHO05D001567 1.7e-09 64.7 36 80.6
PSO339G5019 Papaver somniferum HOM05D001655 ORTHO05D001567 2.2e-09 64.3 36 83.3
Hund14930 Selenicereus undatus HOM05D001655 ORTHO05D001567 2.2e-09 64.3 36 86.1
SEGI_09664 Sequoiadendron giganteum HOM05D001655 ORTHO05D001567 2.2e-09 64.3 36 80.6
HanXRQChr16g0510281 Helianthus annuus HOM05D001655 ORTHO05D001567 2.9e-09 63.9 36 83.3
PGSC0003DMG400015887 Solanum tuberosum HOM05D001655 ORTHO05D001567 5.0e-09 63.2 36 83.3
Carub.0006s0018 Capsella rubella HOM05D001655 ORTHO05D001567 6.5e-09 62.8 36 80.6
Sed0017699 Sechium edule HOM05D001655 ORTHO05D001567 6.5e-09 62.8 34 82.4
Potri.016G126700 Populus trichocarpa HOM05D001655 ORTHO05D001567 8.5e-09 62.4 36 77.8
Sc07g0006450 Simmondsia chinensis HOM05D001655 ORTHO05D001567 1.1e-08 62.0 36 80.6
Potri.006G104600 Populus trichocarpa HOM05D001655 ORTHO05D001567 1.9e-08 61.2 36 77.8
CARHR212010 Cardamine hirsuta HOM05D001655 ORTHO05D001567 2.5e-08 60.8 36 83.3
Potri.016G126800 Populus trichocarpa HOM05D001655 ORTHO05D001567 2.5e-08 60.8 36 75.0
SMO347G0384 Selaginella moellendorffii HOM05D001655 ORTHO05D001567 3.2e-08 60.5 36 72.2
PSO349G0178 Papaver somniferum HOM05D001655 ORTHO05D001567 4.2e-08 60.1 36 77.8
Os12g0107500 Oryza sativa ssp. japonica HOM05D001655 ORTHO05D001567 5.5e-08 59.7 36 72.2
CSS0023342 Camellia sinensis var. sinensis HOM05D001655 ORTHO05D001567 9.4e-08 58.9 33 78.8
PSO765G0135 Papaver somniferum HOM05D001655 ORTHO05D001567 9.4e-08 58.9 36 77.8
CSS0025944 Camellia sinensis var. sinensis HOM05D001655 ORTHO05D001567 2.7e-07 57.4 33 75.8
Lsat_1_v5_gn_5_149301 Lactuca sativa HOM05D001655 ORTHO05D001567 3.6e-07 57.0 36 72.2
Potri.016G126500 Populus trichocarpa HOM05D001655 ORTHO05D001567 3.6e-07 57.0 36 75.0
CSS0018668 Camellia sinensis var. sinensis HOM05D001655 ORTHO05D001567 4.7e-07 56.6 33 75.8
Lsat_1_v5_gn_5_149261 Lactuca sativa HOM05D001655 ORTHO05D001567 6.1e-07 56.2 36 72.2
CSS0004088 Camellia sinensis var. sinensis HOM05D001655 ORTHO05D001567 1.8e-06 54.7 33 72.7
CSS0023616 Camellia sinensis var. sinensis HOM05D001655 ORTHO05D001567 1.8e-06 54.7 31 77.4
CSS0045292 Camellia sinensis var. sinensis HOM05D001655 ORTHO05D001567 1.8e-06 54.7 33 72.7
SMO356G0607 Selaginella moellendorffii HOM05D001655 ORTHO05D001567 3.0e-06 53.9 36 66.7
Glyma.13G100900 Glycine max HOM05D001655 ORTHO05D001567 3.9e-06 53.5 36 69.4
Peaxi162Scf00744g00337 Petunia axillaris HOM05D001655 ORTHO05D001567 3.9e-06 53.5 36 69.4
SMO364G0072 Selaginella moellendorffii HOM05D001655 ORTHO05D001567 3.9e-06 53.5 36 66.7
Sc22g0002820 Simmondsia chinensis HOM05D001655 ORTHO05D001567 3.9e-06 53.5 35 65.7
Oeu044669.1 Olea europaea HOM05D001655 ORTHO05D001567 5.1e-06 53.1 36 69.4
Medtr4g127370 Medicago truncatula HOM05D003511 ORTHO05D004403 6.7e-06 52.8 36 66.7
Pp3c13_4090 Physcomitrium patens HOM05D001655 ORTHO05D001567 6.7e-06 52.8 36 63.9
Ca_21255_v3 Cicer arietinum L. HOM05D001655 ORTHO05D001567 8.8e-06 52.4 36 66.7
CsaV3_1G031900 Cucumis sativus L. HOM05D001655 ORTHO05D001567 8.8e-06 52.4 36 66.7
Lalb_Chr07g0180661 Lupinus albus HOM05D001655 ORTHO05D001567 8.8e-06 52.4 36 66.7
Phvul.003G141000 Phaseolus vulgaris HOM05D001655 ORTHO05D001567 8.8e-06 52.4 36 66.7
SEGI_17219 Sequoiadendron giganteum HOM05D001655 ORTHO05D001567 8.8e-06 52.4 36 69.4


User provided reference genes

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