Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g12405 Nelumbo nucifera HOM05D007486 ORTHO05D003673 7.3e-83 310.5 151 100.0
MD05G1166500 Malus domestica HOM05D007486 ORTHO05D003673 9.1e-33 144.1 145 51.7
Sabra02G0188800 Salix brachista HOM05D007486 ORTHO05D003673 1.3e-31 140.2 139 53.2
CANSAT01G2277 Cannabis sativa HOM05D007486 ORTHO05D003673 2.9e-31 139.0 144 51.4
CANSAT01G2464 Cannabis sativa HOM05D007486 ORTHO05D003673 2.9e-31 139.0 144 51.4
Cpa.g.sc8.109 Carica papaya HOM05D007486 ORTHO05D003673 1.1e-30 137.1 139 53.2
CDE08G0247 Ceratophyllum demersum HOM05D007486 ORTHO05D003673 1.5e-27 126.7 139 50.4
Gohir.A07G091500 Gossypium hirsutum HOM05D007486 ORTHO05D003673 9.7e-27 124.0 143 45.5
TWI18G0642 Tripterygium wilfordii HOM05D007486 ORTHO05D003673 2.2e-23 112.8 125 48.8
Oeu003624.1 Olea europaea HOM05D007486 ORTHO05D003673 3.0e-20 102.4 68 67.6
Os06g0184866 Oryza sativa ssp. japonica HOM05D007486 ORTHO05D003673 3.9e-20 102.1 140 39.3
Potri.002G248100 Populus trichocarpa HOM05D007486 ORTHO05D003673 1.3e-18 97.1 139 42.4
A07p07090 Brassica napus HOM05D007486 ORTHO05D003673 3.0e-12 75.9 150 32.7
HPP92_000898 Vanilla planifolia HOM05D007486 ORTHO05D003673 6.3e-10 68.2 127 35.4
THA.LOC104800555 Tarenaya hassleriana HOM05D007402 ORTHO05D003673 8.2e-10 67.8 139 28.8
PSO017G6569 Papaver somniferum HOM05D007486 ORTHO05D003673 7.0e-09 64.7 93 39.8
Zm00001eb374560 Zea mays HOM05D007486 ORTHO05D003673 4.5e-08 62.0 50 52.0
HanXRQChr06g0172221 Helianthus annuus HOM05D007486 ORTHO05D003673 1.3e-07 60.5 56 55.4
Aa31LG5G8210 Aethionema arabicum HOM05D005584 ORTHO05D006809 2.2e-07 59.7 123 26.0
Cpa.g.sc13.131 Carica papaya HOM05D007402 ORTHO05D003673 3.8e-07 58.9 132 26.5
Medtr2g018820 Medicago truncatula HOM05D007486 ORTHO05D003673 5.0e-07 58.5 53 60.4
Peaxi162Scf00454g00034 Petunia axillaris HOM05D007402 ORTHO05D003673 8.5e-07 57.8 135 27.4
Lsat_1_v5_gn_2_97841 Lactuca sativa HOM05D007402 ORTHO05D003673 1.5e-06 57.0 134 26.1
PSO210G6432 Papaver somniferum HOM05D007155 ORTHO05D003034 1.5e-06 57.0 87 39.1


User provided reference genes

Program Settings