Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn003s41378 Nelumbo nucifera HOM05D014173 ORTHO05D000001 9.0e-72 273.5 138 100.0
Nn003s41379 Nelumbo nucifera HOM05D014173 ORTHO05D000001 9.0e-72 273.5 138 100.0
Nn1g09914 Nelumbo nucifera HOM05D014173 ORTHO05D000001 9.0e-72 273.5 138 100.0
Nn1g09925 Nelumbo nucifera HOM05D014173 ORTHO05D000001 9.0e-72 273.5 138 100.0
Nn1g10019 Nelumbo nucifera HOM05D014173 ORTHO05D000001 9.0e-72 273.5 138 100.0
Nn2g12232 Nelumbo nucifera HOM05D014173 ORTHO05D000001 9.0e-72 273.5 138 100.0
Atru.chr10.1206 Acer truncatum HOM05D000002 ORTHO05D000001 1.9e-13 79.7 101 44.6
TAR084G0004 Trochodendron aralioides HOM05D001435 ORTHO05D001304 1.6e-12 76.6 85 45.9
Hma1.2p1_0616F.1_g189980 Hydrangea macrophylla HOM05D014173 ORTHO05D000001 1.1e-11 73.9 106 37.7
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.1e-11 73.9 96 42.7
TPR.G20034 Trifolium pratense HOM05D000002 ORTHO05D000001 1.4e-11 73.6 109 36.7
Atru.chr10.1233 Acer truncatum HOM05D000002 ORTHO05D000001 2.3e-11 72.8 94 40.4
SHI11018 Sapria himalayana HOM05D004993 ORTHO05D000001 2.3e-11 72.8 102 42.2
Rhsim02G0101900 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.0e-11 72.0 96 41.7
Rhsim05G0182900 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.2e-10 70.5 89 38.2
TPR.G28647 Trifolium pratense HOM05D000002 ORTHO05D000001 1.5e-10 70.1 109 36.7
Hma1.2p1_0939F.1_g239370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.4e-10 68.9 98 39.8
Hma1.2p1_0565F.1_g179600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.4e-10 68.6 98 39.8
Hma1.2p1_2397F.1_g321370 Hydrangea macrophylla HOM05D014173 ORTHO05D000001 4.4e-10 68.6 106 36.8
SHI29784 Sapria himalayana HOM05D000002 ORTHO05D000001 5.8e-10 68.2 104 39.4
Hma1.2p1_0577F.1_g182200 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-09 67.0 89 37.1
Hma1.2p1_1270F.1_g271670 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-09 67.0 94 38.3
Hma1.2p1_0459F.1_g157220 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.7e-09 66.6 95 38.9
SHI32040 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-09 65.5 102 37.3
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.9e-09 65.1 89 37.1
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 6.4e-09 64.7 65 52.3
Atru.chr1.1416 Acer truncatum HOM05D000002 ORTHO05D000001 1.1e-08 63.9 100 37.0
Aa31LG3G5060 Aethionema arabicum HOM05D000002 ORTHO05D000001 1.1e-08 63.9 85 35.3
Hma1.2p1_0000F.1_g000910 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-08 63.5 100 38.0
Hma1.2p1_0672F.1_g201120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-08 63.2 83 37.3
SHI34507 Sapria himalayana HOM05D014173 ORTHO05D000001 2.4e-08 62.8 102 40.2
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.1e-08 61.2 83 34.9
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.1e-08 61.2 83 34.9
Sopen01g008940 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-08 61.2 105 33.3
TPR.G17518 Trifolium pratense HOM05D000002 ORTHO05D000001 1.2e-07 60.5 86 38.4
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.2e-07 60.5 85 37.6
Oeu012960.1 Olea europaea HOM05D000002 ORTHO05D000001 1.6e-07 60.1 102 34.3
SHI03320 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-07 60.1 118 35.6
GSVIVG01017026001 Vitis vinifera HOM05D000101 ORTHO05D000001 2.1e-07 59.7 85 40.0
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 2.7e-07 59.3 83 33.7
SHI50795 Sapria himalayana HOM05D004993 ORTHO05D000001 3.5e-07 58.9 66 43.9
Manes.08G119311 Manihot esculenta HOM05D011157 ORTHO05D000001 4.6e-07 58.5 92 35.9
CAN.G783.9 Capsicum annuum HOM05D014173 ORTHO05D000001 6.0e-07 58.2 80 33.8
Hma1.2p1_1093F.1_g256070 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.0e-07 58.2 83 36.1
CiPaw.01G071400 Carya illinoinensis HOM05D000002 ORTHO05D000001 7.8e-07 57.8 83 36.1
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.8e-07 57.8 85 34.1
SHI51781 Sapria himalayana HOM05D004993 ORTHO05D000001 7.8e-07 57.8 66 42.4
TPR.G24932 Trifolium pratense HOM05D000002 ORTHO05D000001 7.8e-07 57.8 86 38.4
RcHm_v2.0_Chr1g0350631 Rosa chinensis HOM05D000002 ORTHO05D000001 1.0e-06 57.4 98 37.8
Sopen00g009240 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.4 89 32.6
Sopen10g028380 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.4 89 32.6
FvH4_2g00591 Fragaria vesca HOM05D000002 ORTHO05D000001 1.3e-06 57.0 85 36.5
Hma1.2p1_0706F.1_g207010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.7e-06 56.6 83 37.3
CAN.G128.92 Capsicum annuum HOM05D000002 ORTHO05D000001 2.3e-06 56.2 82 39.0
CAN.G1741.2 Capsicum annuum HOM05D000002 ORTHO05D000001 2.3e-06 56.2 78 41.0
RcHm_v2.0_Chr5g0082731 Rosa chinensis HOM05D000002 ORTHO05D000001 2.3e-06 56.2 109 31.2
RcHm_v2.0_Chr6g0304931 Rosa chinensis HOM05D000002 ORTHO05D000001 2.3e-06 56.2 82 35.4
Oeu060318.1 Olea europaea HOM05D000002 ORTHO05D000001 3.0e-06 55.8 85 36.5
CsaV3_2G011860 Cucumis sativus L. HOM05D000002 ORTHO05D000001 3.9e-06 55.5 78 37.2
CSS0044431 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-06 55.1 83 30.1
Hma1.2p1_1373F.1_g278770 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.1e-06 55.1 133 31.6
Hma1.2p1_2443F.1_g322295 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.1e-06 55.1 133 31.6
TPR.G27549 Trifolium pratense HOM05D000002 ORTHO05D000001 5.1e-06 55.1 85 32.9
GSVIVG01022096001 Vitis vinifera HOM05D000277 ORTHO05D000214 6.6e-06 54.7 67 40.3
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.6e-06 54.3 83 37.3


User provided reference genes

Program Settings