Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g12220 Nelumbo nucifera HOM05D007673 ORTHO05D009278 3.4e-75 285.0 155 100.0
Nn8g39681 Nelumbo nucifera HOM05D007673 ORTHO05D009278 1.1e-41 173.7 153 69.3
TAR625G1436 Trochodendron aralioides HOM05D007673 ORTHO05D009278 2.3e-39 166.0 158 63.9
TAR383G0338 Trochodendron aralioides HOM05D007673 ORTHO05D009278 1.4e-36 156.8 159 64.2
MBI14_g03622_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 7.1e-33 144.4 157 58.6
Dinv41432 Davidia involucrata HOM05D007673 ORTHO05D009278 6.0e-32 141.4 159 57.9
Aqoxy7G03558 Aquilegia oxysepala HOM05D007673 ORTHO05D009278 5.1e-31 138.3 165 57.0
Dinv43178 Davidia involucrata HOM05D007673 ORTHO05D009278 3.8e-26 122.1 157 49.7
Sabra06G0043300 Salix brachista HOM05D007673 ORTHO05D009278 3.5e-24 115.5 160 48.1
GSVIVG01012874001 Vitis vinifera HOM05D007673 ORTHO05D009278 7.9e-24 114.4 160 54.4
Potri.006G060000 Populus trichocarpa HOM05D007673 ORTHO05D009278 4.8e-21 105.1 159 47.8
Manes.06G043400 Manihot esculenta HOM05D007673 ORTHO05D009278 2.4e-20 102.8 159 42.8
CSS0039366 Camellia sinensis var. sinensis HOM05D007673 ORTHO05D009278 3.1e-20 102.4 161 46.6
Nitab4.5_0008829g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 9.0e-20 100.9 141 48.9
QL02p091069 Quercus lobata HOM05D007673 ORTHO05D009278 1.0e-18 97.4 157 45.9
Actinidia21918 Actinidia chinensis HOM05D007673 ORTHO05D009278 1.3e-18 97.1 164 47.0
Nitab4.5_0003305g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 1.7e-18 96.7 141 48.2
MBI15_g28791_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 3.8e-18 95.5 121 50.4
PSO017G0897 Papaver somniferum HOM05D007673 ORTHO05D009278 3.8e-18 95.5 172 45.9
CiPaw.16G118400 Carya illinoinensis HOM05D007673 ORTHO05D009278 6.5e-18 94.7 156 43.6
PSO170G6343 Papaver somniferum HOM05D007673 ORTHO05D009278 3.2e-17 92.4 167 44.3
Prupe.7G256100 Prunus persica HOM05D007673 ORTHO05D009278 7.1e-17 91.3 172 45.3
CiPaw.15G183400 Carya illinoinensis HOM05D007673 ORTHO05D009278 1.2e-16 90.5 164 46.3
Thecc.09G139900 Theobroma cacao HOM05D007673 ORTHO05D009278 1.6e-16 90.1 158 42.4
Actinidia04238 Actinidia chinensis HOM05D007673 ORTHO05D009278 2.1e-16 89.7 160 41.2
Oeu051709.1 Olea europaea HOM05D007673 ORTHO05D009278 2.7e-16 89.4 147 41.5
TWI34G1167 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 1.8e-15 86.7 161 39.8
Lalb_Chr07g0179441 Lupinus albus HOM05D007673 ORTHO05D009278 3.0e-15 85.9 160 40.6
PGSC0003DMG400030693 Solanum tuberosum HOM05D007673 ORTHO05D009278 3.0e-15 85.9 132 43.2
COL.COLO4_24126 Corchorus olitorius HOM05D007673 ORTHO05D009278 5.1e-15 85.1 163 39.9
Peaxi162Scf00108g00316 Petunia axillaris HOM05D007673 ORTHO05D009278 5.1e-15 85.1 162 44.4
Glyma.13G165000 Glycine max HOM05D007673 ORTHO05D009278 6.7e-15 84.7 160 38.8
Potri.018G115601 Populus trichocarpa HOM05D007673 ORTHO05D009278 1.1e-14 84.0 158 43.7
Peaxi162Scf00088g00016 Petunia axillaris HOM05D007673 ORTHO05D009278 1.5e-14 83.6 161 46.0
Sopen07g003330 Solanum pennellii HOM05D007673 ORTHO05D009278 1.5e-14 83.6 116 46.6
Rhsim01G0051900 Rhododendron simsii HOM05D007673 ORTHO05D009278 7.4e-14 81.3 186 36.6
TWI32G1294 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 9.7e-14 80.9 157 38.9
Solyc07g007270.3 Solanum lycopersicum HOM05D007673 ORTHO05D009278 2.8e-13 79.3 162 39.5
Glyma.17G106100 Glycine max HOM05D007673 ORTHO05D009278 4.8e-13 78.6 161 37.3
Lalb_Chr13g0301271 Lupinus albus HOM05D007673 ORTHO05D009278 4.8e-13 78.6 163 40.5
Cc06_g07510 Coffea canephora HOM05D007673 ORTHO05D009278 6.3e-13 78.2 168 44.0
Gohir.A05G012100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 8.2e-13 77.8 164 40.9
Gohir.D05G013100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 8.2e-13 77.8 164 41.5
Gorai.009G013100 Gossypium raimondii HOM05D007673 ORTHO05D009278 8.2e-13 77.8 164 41.5
Manes.14G120200 Manihot esculenta HOM05D007673 ORTHO05D009278 1.1e-12 77.4 161 41.6
CAN.G877.9 Capsicum annuum HOM05D007673 ORTHO05D009278 1.4e-12 77.0 165 43.6
Lj6g0015094 Lotus japonicus HOM05D007673 ORTHO05D009278 2.4e-12 76.3 160 39.4
DCAR_014921 Daucus carota HOM05D007673 ORTHO05D009278 2.6e-11 72.8 92 48.9
DCAR_017766 Daucus carota HOM05D007673 ORTHO05D009278 2.6e-11 72.8 100 45.0
Phvul.009G210216 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 2.6e-11 72.8 161 37.3
MD15G1160900 Malus domestica HOM05D007673 ORTHO05D009278 3.4e-11 72.4 152 37.5
FvH4_1g01840 Fragaria vesca HOM05D022859 ORTHO05D009278 1.7e-10 70.1 163 37.4
CsaV3_1G028420 Cucumis sativus L. HOM05D007673 ORTHO05D009278 2.2e-10 69.7 146 41.1
FAN28G1648 Fragaria x ananassa HOM05D022859 ORTHO05D009278 2.2e-10 69.7 163 36.8
VMungo1215G2163 Vigna mungo HOM05D007673 ORTHO05D009278 2.2e-10 69.7 158 34.2
Medtr2g450420 Medicago truncatula HOM05D007673 ORTHO05D009278 2.9e-10 69.3 164 35.4
Eucgr.C04106 Eucalyptus grandis HOM05D007673 ORTHO05D009278 3.8e-10 68.9 94 47.9
PGR102G0920 Punica granatum HOM05D007673 ORTHO05D009278 3.8e-10 68.9 168 41.1
MD02G1016300 Malus domestica HOM05D007673 ORTHO05D009278 5.0e-10 68.6 161 42.2
TAR626G1415 Trochodendron aralioides HOM05D007673 ORTHO05D009278 5.0e-10 68.6 104 49.0
Oeu055924.1 Olea europaea HOM05D007673 ORTHO05D009278 8.5e-10 67.8 155 38.7
Medtr4g116360 Medicago truncatula HOM05D007673 ORTHO05D009278 1.4e-09 67.0 162 35.8
HanXRQChr09g0243101 Helianthus annuus HOM05D007673 ORTHO05D009278 3.2e-09 65.9 157 37.6
Psat0s503g0080 Pisum sativum HOM05D007673 ORTHO05D009278 3.2e-09 65.9 161 37.3
Psat0s5432g0040 Pisum sativum HOM05D007673 ORTHO05D009278 3.2e-09 65.9 161 37.3
Lsat_1_v5_gn_8_63020 Lactuca sativa HOM05D007673 ORTHO05D009278 4.2e-09 65.5 96 44.8
Lsat_1_v5_gn_7_45981 Lactuca sativa HOM05D007673 ORTHO05D009278 9.4e-09 64.3 160 36.2
vmacro21889 Vaccinium macrocarpon HOM05D007673 ORTHO05D009278 6.1e-08 61.6 183 31.1
Phvul.003G173600 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 1.4e-07 60.5 160 32.5
Migut.K00385 Erythranthe guttata HOM05D007673 ORTHO05D009278 2.3e-07 59.7 66 54.5
FAN26G0562 Fragaria x ananassa HOM05D022859 ORTHO05D009278 3.0e-07 59.3 205 32.2
Sed0013238 Sechium edule HOM05D007673 ORTHO05D009278 3.0e-07 59.3 152 35.5
VMungo1309G0908 Vigna mungo HOM05D007673 ORTHO05D009278 3.9e-07 58.9 161 33.5
ClCG06G011960 Citrullus lanatus HOM05D007673 ORTHO05D009278 6.7e-07 58.2 141 43.3
ECA240G3592 Erigeron canadensis HOM05D007673 ORTHO05D009278 6.7e-07 58.2 165 36.4
MSTRG.6086 Avicennia marina HOM05D007673 ORTHO05D009278 8.8e-07 57.8 161 34.2
TAR362G0190 Trochodendron aralioides HOM05D007673 ORTHO05D009278 8.8e-07 57.8 88 43.2
FAN19G1896 Fragaria x ananassa HOM05D022859 ORTHO05D009278 3.3e-06 55.8 178 32.0
Potri.006G059900 Populus trichocarpa HOM05D012006 ORTHO05D014172 3.3e-06 55.8 78 44.9
SalBow1G8253 Salvia bowleyana HOM05D007673 ORTHO05D009278 3.3e-06 55.8 159 34.0
Dinv42922 Davidia involucrata HOM05D012006 ORTHO05D014172 7.4e-06 54.7 73 45.2
HanXRQChr05g0139641 Helianthus annuus HOM05D007673 ORTHO05D009278 9.7e-06 54.3 66 50.0


User provided reference genes

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