Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 3.2e-192 674.9 326 100.0
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 2.3e-158 562.4 295 90.5
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 5.9e-154 547.7 290 89.3
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 9.4e-152 540.4 290 88.3
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 2.7e-151 538.9 292 88.0
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 1.5e-149 533.1 292 86.6
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 4.4e-149 531.6 292 87.3
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 5.7e-149 531.2 292 87.0
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 5.7e-149 531.2 292 85.6
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 9.7e-149 530.4 292 87.0
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 1.7e-148 529.6 292 86.0
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 1.7e-148 529.6 290 87.2
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 2.2e-148 529.3 290 86.2
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 2.8e-148 528.9 292 84.6
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 3.7e-148 528.5 292 87.0
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 3.7e-148 528.5 292 85.3
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 6.3e-148 527.7 292 84.9
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 6.3e-148 527.7 292 86.6
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 8.2e-148 527.3 290 86.2
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 1.1e-147 526.9 292 86.0
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 1.4e-147 526.6 292 85.6
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.8e-147 526.2 292 86.0
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 1.8e-147 526.2 292 86.0
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 2.4e-147 525.8 292 84.9
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 9.1e-147 523.9 290 85.5
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 1.2e-146 523.5 280 87.9
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.2e-146 523.5 292 84.9
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 1.5e-146 523.1 290 85.2
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.5e-146 523.1 292 85.3
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 2.0e-146 522.7 289 85.1
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 2.6e-146 522.3 292 84.6
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 5.9e-146 521.2 289 85.8
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 5.9e-146 521.2 288 85.4
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 7.7e-146 520.8 292 84.2
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 7.7e-146 520.8 292 84.9
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 1.0e-145 520.4 292 84.6
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.0e-145 520.4 292 84.6
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 2.2e-145 519.2 292 83.6
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 2.2e-145 519.2 290 83.4
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.2e-145 519.2 292 84.2
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 2.9e-145 518.8 288 84.7
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 5.0e-145 518.1 292 83.6
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 6.5e-145 517.7 292 84.6
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 8.5e-145 517.3 292 83.9
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 1.1e-144 516.9 290 84.8
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 1.1e-144 516.9 290 84.5
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.1e-144 516.9 290 84.5
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 1.1e-144 516.9 294 85.4
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 1.9e-144 516.2 292 83.9
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 1.9e-144 516.2 292 83.6
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.9e-144 516.2 292 84.9
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 2.5e-144 515.8 290 83.1
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 3.2e-144 515.4 288 83.0
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 4.2e-144 515.0 292 83.9
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 4.2e-144 515.0 292 83.9
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 5.5e-144 514.6 288 84.0
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 5.5e-144 514.6 292 83.6
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 9.4e-144 513.8 292 83.6
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 9.4e-144 513.8 291 82.1
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 3.6e-143 511.9 287 84.7
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 3.6e-143 511.9 292 82.5
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 7.9e-143 510.8 290 82.1
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 7.9e-143 510.8 290 81.7
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 1.8e-142 509.6 290 81.4
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 1.8e-142 509.6 321 76.3
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 1.8e-142 509.6 291 83.2
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.3e-142 509.2 289 84.1
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 2.3e-142 509.2 290 81.4
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 3.0e-142 508.8 290 83.1
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 6.7e-142 507.7 292 81.5
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 8.8e-142 507.3 290 81.4
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 8.8e-142 507.3 327 74.6
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 8.8e-142 507.3 290 81.4
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 8.8e-142 507.3 291 81.4
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 1.1e-141 506.9 292 81.2
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 2.0e-141 506.1 292 83.6
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.6e-141 505.8 292 83.2
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 2.6e-141 505.8 290 82.1
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 4.4e-141 505.0 292 80.5
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 5.7e-141 504.6 292 82.5
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 9.7e-141 503.8 292 80.1
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 2.8e-140 502.3 292 80.5
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 2.8e-140 502.3 291 79.7
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 4.8e-140 501.5 291 79.0
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 1.8e-139 499.6 292 80.5
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 4.1e-139 498.4 292 80.1
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 1.6e-138 496.5 290 80.0
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 2.6e-138 495.7 290 80.3
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 2.6e-138 495.7 291 81.1
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 1.0e-137 493.8 289 79.2
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 6.5e-137 491.1 290 78.3
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 6.5e-137 491.1 290 78.3
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 6.5e-137 491.1 287 80.8
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 1.1e-136 490.3 275 84.7
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 3.2e-136 488.8 273 85.3
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.2e-136 488.4 278 83.1
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 2.1e-135 486.1 273 84.6
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 2.7e-135 485.7 290 77.6
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 2.7e-135 485.7 290 77.6
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 8.0e-135 484.2 290 80.0
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 1.4e-134 483.4 287 77.7
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 1.8e-134 483.0 273 83.9
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 2.4e-131 472.6 294 75.5
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 9.1e-131 470.7 289 75.8
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 5.9e-130 468.0 292 78.4
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 2.9e-129 465.7 313 74.1
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 2.5e-128 462.6 251 86.5
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 2.1e-127 459.5 292 76.4
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.4e-126 456.8 273 81.7
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 1.8e-126 456.4 292 76.7
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 7.5e-125 451.1 312 69.9
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 8.3e-124 447.6 285 72.6
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 8.3e-124 447.6 286 73.1
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 4.2e-120 435.3 274 73.4
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 5.2e-118 428.3 281 70.8
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 7.8e-114 414.5 268 72.4
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 1.4e-107 393.7 223 83.9
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 4.1e-107 392.1 281 64.4
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 2.5e-96 356.3 321 59.2
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 3.3e-88 329.3 190 81.6
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 2.4e-86 323.2 289 52.2
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 2.2e-84 316.6 186 81.2
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 7.1e-83 311.6 183 80.9
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 3.9e-81 305.8 294 52.4
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 4.3e-80 302.4 173 82.7
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 1.2e-79 300.8 188 76.1
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 5.2e-78 295.4 290 53.1
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 1.0e-73 281.2 293 46.4
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 1.8e-57 227.3 310 44.8
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 2.3e-57 226.9 164 68.3
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.0e-52 211.5 224 52.7
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.2e-52 210.3 221 53.4
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 1.5e-48 197.6 106 87.7
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 5.5e-43 179.1 101 83.2
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 9.4e-43 178.3 102 81.4
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 5.7e-40 169.1 96 82.3
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 1.0e-28 131.7 76 81.6
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 7.0e-22 109.0 96 61.5
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 6.5e-20 102.4 166 38.0
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 1.9e-11 74.3 51 66.7
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 2.7e-10 70.5 40 87.5


User provided reference genes

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