Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 0.0e+00 1315.8 701 100.0
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 5.7e-255 884.4 676 72.3
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 5.0e-227 791.6 658 65.8
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 8.6e-227 790.8 676 65.2
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 1.1e-226 790.4 680 65.3
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 4.2e-226 788.5 673 65.7
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 4.0e-224 781.9 686 64.3
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 5.2e-224 781.6 685 63.5
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 1.3e-222 776.9 682 64.7
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 6.6e-219 764.6 677 63.8
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 8.6e-219 764.2 678 63.9
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.6e-217 760.0 678 63.4
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 6.1e-217 758.1 678 63.6
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 8.0e-217 757.7 677 63.4
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.3e-216 756.1 678 63.4
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 3.4e-215 752.3 677 64.8
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 4.4e-215 751.9 678 62.2
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 4.4e-215 751.9 677 62.9
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 9.8e-215 750.7 683 63.0
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 2.0e-212 743.0 689 61.4
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.7e-211 740.0 678 63.0
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 3.9e-211 738.8 659 63.9
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 5.0e-211 738.4 659 64.0
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 6.2e-209 731.5 716 59.1
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 8.9e-208 727.6 679 60.7
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 1.9e-205 719.9 688 61.3
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 7.0e-205 718.0 677 62.3
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 6.0e-204 714.9 802 53.9
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 7.8e-204 714.5 677 60.6
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 6.6e-203 711.4 677 60.9
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 6.6e-203 711.4 688 60.2
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 1.9e-202 709.9 678 60.3
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 9.5e-202 707.6 679 59.2
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 1.6e-201 706.8 682 59.5
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 2.1e-201 706.4 674 60.1
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 2.3e-200 703.0 686 60.3
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 3.1e-200 702.6 675 59.6
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 6.8e-200 701.4 682 59.4
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 6.8e-200 701.4 682 59.5
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 8.9e-200 701.0 676 59.5
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 1.7e-198 696.8 673 57.9
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 3.7e-198 695.7 675 57.6
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 6.4e-198 694.9 677 59.2
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 6.4e-198 694.9 684 59.4
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 1.4e-197 693.7 677 59.4
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 1.9e-197 693.3 682 59.2
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 6.0e-196 688.3 675 57.3
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 2.5e-194 682.9 681 56.7
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 8.1e-193 677.9 680 57.1
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 1.4e-192 677.2 679 57.4
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 2.4e-192 676.4 675 57.3
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 4.4e-191 672.2 681 58.3
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 4.4e-191 672.2 676 57.4
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 9.9e-191 671.0 679 56.0
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 8.4e-190 667.9 689 57.0
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 1.9e-189 666.8 668 58.1
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 7.1e-189 664.8 723 55.3
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 7.1e-189 664.8 689 56.9
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 1.7e-187 660.2 677 55.4
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 1.7e-187 660.2 803 51.3
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 2.3e-187 659.8 680 57.6
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.6e-185 653.7 675 55.1
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 8.1e-185 651.4 668 56.9
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 3.4e-183 646.0 661 55.4
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 7.6e-183 644.8 669 55.8
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 9.9e-183 644.4 661 55.2
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 1.3e-182 644.0 707 54.0
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 1.3e-182 644.0 675 55.9
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 1.7e-182 643.7 672 56.4
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.2e-182 643.3 672 56.2
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 4.9e-182 642.1 683 54.5
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 2.4e-181 639.8 667 56.4
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 2.4e-181 639.8 655 56.0
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.7e-180 636.3 672 56.0
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 4.6e-180 635.6 623 58.9
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 1.7e-179 633.6 826 48.2
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.9e-178 630.2 672 55.5
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 2.9e-174 616.3 678 54.6
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 3.2e-173 612.8 683 54.0
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 1.2e-172 610.9 657 53.6
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 2.1e-172 610.1 685 54.0
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 1.8e-171 607.1 672 53.1
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 2.3e-171 606.7 673 54.1
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 2.5e-170 603.2 654 54.4
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 7.4e-170 601.7 674 55.2
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 9.6e-170 601.3 538 64.3
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 9.6e-170 601.3 675 53.0
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 9.6e-170 601.3 675 53.2
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 5.3e-168 595.5 660 54.1
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 2.6e-167 593.2 688 53.1
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 2.7e-164 583.2 677 52.7
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.6e-161 573.9 703 50.8
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 3.7e-161 572.8 666 52.3
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 6.2e-161 572.0 578 56.7
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 1.4e-160 570.9 647 53.2
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 3.1e-160 569.7 673 51.6
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 4.5e-159 565.8 414 73.7
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 1.7e-158 563.9 678 52.7
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 1.1e-157 561.2 677 51.6
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.1e-157 561.2 466 67.4
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 7.9e-156 555.1 677 51.0
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 2.3e-155 553.5 714 49.9
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 5.1e-155 552.4 524 59.7
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 2.8e-153 546.6 673 50.1
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 1.1e-152 544.7 829 43.9
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 6.5e-150 535.4 759 45.8
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 1.4e-149 534.3 674 49.7
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 1.9e-149 533.9 671 50.7
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 5.5e-149 532.3 676 49.3
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 2.7e-148 530.0 662 50.2
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 4.6e-148 529.3 669 49.2
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 1.8e-147 527.3 676 49.4
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 2.4e-144 516.9 670 48.1
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 3.1e-144 516.5 675 48.1
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 5.3e-144 515.8 675 48.4
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 3.8e-142 509.6 651 48.7
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 6.5e-142 508.8 677 48.4
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 9.4e-141 505.0 685 48.3
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 1.6e-140 504.2 673 49.3
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 2.3e-139 500.4 654 49.8
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 5.7e-138 495.7 676 47.8
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 1.7e-137 494.2 684 47.1
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 1.8e-136 490.7 724 43.4
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 1.5e-135 487.6 609 51.1
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 5.9e-135 485.7 700 46.0
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 1.0e-134 485.0 671 47.5
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 2.9e-134 483.4 584 51.7
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 3.2e-133 479.9 655 45.6
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 7.2e-133 478.8 681 45.8
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 4.7e-132 476.1 534 52.8
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 2.3e-131 473.8 655 45.2
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 7.4e-130 468.8 470 58.5
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 9.7e-130 468.4 469 57.1
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 1.6e-127 461.1 674 44.5
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 1.7e-126 457.6 675 44.0
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.9e-126 456.8 470 57.4
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 2.5e-125 453.8 704 43.8
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.2e-124 451.4 468 57.3
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 8.0e-124 448.7 461 55.7
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 2.2e-118 430.6 686 40.7
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 6.3e-113 412.5 463 53.3
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 7.0e-112 409.1 678 40.0
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 1.7e-105 387.9 659 39.0
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 7.3e-101 372.5 643 42.6
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.3e-99 367.5 455 52.5
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.1e-92 344.4 288 62.8
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 7.1e-80 302.8 486 44.0
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 5.6e-69 266.5 614 35.2
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 1.6e-63 248.4 356 46.3
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 4.5e-58 230.3 340 45.6
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 4.9e-57 226.9 292 45.2
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 1.6e-52 211.8 330 43.9
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 2.4e-51 208.0 160 71.2
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.2e-50 205.7 122 79.5
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 2.0e-50 204.9 351 44.7
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 7.6e-50 203.0 135 78.5
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 1.6e-47 195.3 276 46.0
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.5e-45 188.7 235 46.4
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 3.3e-45 187.6 234 47.4
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-43 181.8 497 31.4
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 1.3e-41 175.6 210 50.5
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 2.9e-41 174.5 306 36.9
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 2.5e-40 171.4 221 46.2
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 1.6e-36 158.7 117 71.8
MBI13_g36805_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 6.9e-27 126.7 139 57.6
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 5.9e-26 123.6 120 55.0
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.0e-25 122.9 109 62.4
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 2.1e-23 115.2 118 57.6
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.7e-23 114.8 154 48.7
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 1.1e-21 109.4 100 61.0
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 9.7e-21 106.3 100 60.0
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 4.8e-20 104.0 87 64.4
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 1.8e-19 102.1 117 52.1
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 1.8e-19 102.1 73 71.2
HPP92_000472 Vanilla planifolia HOM05D003622 ORTHO05D004453 9.1e-19 99.8 158 44.3
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.0e-17 96.3 114 52.6
MBI13_g02371_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D000708 2.4e-11 75.1 67 65.7
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 1.2e-10 72.8 56 64.3
MD02G1023900 Malus domestica HOM05D003622 ORTHO05D048666 2.9e-09 68.2 88 43.2
Actinidia38716 Actinidia chinensis HOM05D003622 ORTHO05D004453 3.8e-09 67.8 57 56.1
CBR_g27932 Chara braunii HOM05D000019 ORTHO05D000002 8.5e-09 66.6 160 30.6
Oeu055964.1 Olea europaea HOM05D001574 ORTHO05D000708 1.1e-08 66.2 45 66.7
MBI13_g36808_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 7.2e-08 63.5 100 47.0
Oeu042754.1 Olea europaea HOM05D003622 ORTHO05D004453 7.2e-08 63.5 48 64.6
Manes.17G022150 Manihot esculenta HOM05D003622 ORTHO05D000708 9.4e-08 63.2 82 50.0
Haze_25504 Corylus avellana HOM05D003622 ORTHO05D004453 4.0e-06 57.8 81 44.4
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 6.8e-06 57.0 115 39.1


User provided reference genes

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