Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g12054 Nelumbo nucifera HOM05D003715 ORTHO05D003958 5.9e-155 550.8 277 100.0
TAR623G0055 Trochodendron aralioides HOM05D003715 ORTHO05D003958 8.4e-69 264.6 312 52.9
Nn7g35866 Nelumbo nucifera HOM05D003715 ORTHO05D003958 3.1e-63 246.1 279 53.8
TAR633G2492 Trochodendron aralioides HOM05D003715 ORTHO05D003958 3.8e-61 239.2 310 49.7
TAR369G0375 Trochodendron aralioides HOM05D003715 ORTHO05D003958 7.9e-59 231.5 271 53.1
Cfa001533 Carpinus fangiana HOM05D003715 ORTHO05D003958 3.4e-54 216.1 306 47.4
Haze_19430 Corylus avellana HOM05D003715 ORTHO05D003958 6.5e-53 211.8 314 46.2
Dinv14575 Davidia involucrata HOM05D003715 ORTHO05D003958 7.2e-52 208.4 295 48.5
PSO339G5928 Papaver somniferum HOM05D003715 ORTHO05D003958 1.2e-51 207.6 308 45.1
QL07p018445 Quercus lobata HOM05D003715 ORTHO05D003958 6.1e-51 205.3 315 45.4
MBI04_g28023_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 1.4e-50 204.1 303 46.5
PSO384G3755 Papaver somniferum HOM05D003715 ORTHO05D003958 1.4e-50 204.1 311 44.7
PSO781G0019 Papaver somniferum HOM05D003715 ORTHO05D003958 1.4e-50 204.1 290 46.2
Manes.08G145000 Manihot esculenta HOM05D003715 ORTHO05D003958 2.6e-49 199.9 298 43.0
Manes.09G140500 Manihot esculenta HOM05D003715 ORTHO05D003958 9.7e-49 198.0 290 43.4
Sabra19G0044200 Salix brachista HOM05D003715 ORTHO05D003958 4.1e-47 192.6 311 41.2
Sabra19G0047500 Salix brachista HOM05D003715 ORTHO05D003958 4.1e-47 192.6 311 41.2
Actinidia22080 Actinidia chinensis HOM05D003715 ORTHO05D003958 6.9e-47 191.8 314 43.9
CiPaw.10G001300 Carya illinoinensis HOM05D003715 ORTHO05D003958 1.2e-46 191.0 315 42.9
MBI01_g25640_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 1.0e-45 188.0 332 40.7
Potri.019G035600 Populus trichocarpa HOM05D003715 ORTHO05D003958 3.8e-45 186.0 312 40.1
Dinv37021 Davidia involucrata HOM05D003715 ORTHO05D003958 1.4e-44 184.1 294 46.3
Hma1.2p1_0152F.1_g067600 Hydrangea macrophylla HOM05D003715 ORTHO05D003958 1.4e-44 184.1 291 43.0
MELO3C008806.2 Cucumis melo HOM05D003715 ORTHO05D003958 4.2e-44 182.6 307 39.7
Ciclev10021362m.g Citrus clementina HOM05D003715 ORTHO05D003958 9.4e-44 181.4 302 41.7
CsaV3_4G013240 Cucumis sativus L. HOM05D003715 ORTHO05D003958 1.6e-43 180.6 307 39.4
TWI34G1349 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 4.7e-43 179.1 311 39.9
Atru.chr2.1400 Acer truncatum HOM05D003715 ORTHO05D003958 6.1e-43 178.7 300 43.3
Potri.013G057200 Populus trichocarpa HOM05D003715 ORTHO05D003958 1.4e-42 177.6 311 38.9
Oeu035703.1 Olea europaea HOM05D003715 ORTHO05D003958 1.8e-42 177.2 304 40.8
Solyc10g078590.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 3.0e-42 176.4 273 43.6
Aqoxy2G00514 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 3.9e-42 176.0 290 43.4
ClCG04G005350 Citrullus lanatus HOM05D003715 ORTHO05D003958 8.8e-42 174.9 308 39.9
Oeu024502.1 Olea europaea HOM05D003715 ORTHO05D003958 8.8e-42 174.9 303 40.9
Sopen10g029220 Solanum pennellii HOM05D003715 ORTHO05D003958 1.1e-41 174.5 273 43.2
Eucgr.A02102 Eucalyptus grandis HOM05D003715 ORTHO05D003958 2.0e-41 173.7 299 39.1
PGR042G0616 Punica granatum HOM05D003715 ORTHO05D003958 3.3e-41 172.9 287 43.9
PGSC0003DMG400008354 Solanum tuberosum HOM05D003715 ORTHO05D003958 3.3e-41 172.9 276 42.8
MBI04_g47731_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 3.7e-40 169.5 209 53.6
TWI32G0411 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 4.8e-40 169.1 299 38.8
MD14G1003600 Malus domestica HOM05D003715 ORTHO05D003958 1.4e-39 167.5 301 39.5
MSTRG.26069 Avicennia marina HOM05D003715 ORTHO05D003958 2.4e-39 166.8 286 42.0
MD12G1005100 Malus domestica HOM05D003715 ORTHO05D003958 3.1e-39 166.4 297 39.4
Sabra13G0051000 Salix brachista HOM05D003715 ORTHO05D003958 3.1e-39 166.4 314 38.2
vmacro12564 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 9.1e-39 164.9 300 40.0
Peaxi162Scf00003g04827 Petunia axillaris HOM05D003715 ORTHO05D003958 1.2e-38 164.5 273 43.6
PGR142G1981 Punica granatum HOM05D003715 ORTHO05D003958 7.7e-38 161.8 300 41.7
Duzib106G1922 Durio zibethinus HOM05D003715 ORTHO05D003958 1.3e-37 161.0 294 38.8
Thecc.05G249800 Theobroma cacao HOM05D003715 ORTHO05D003958 2.2e-37 160.2 293 37.2
Lalb_Chr02g0157161 Lupinus albus HOM05D003715 ORTHO05D003958 2.9e-37 159.8 278 39.6
Actinidia30549 Actinidia chinensis HOM05D003715 ORTHO05D003958 6.5e-37 158.7 217 49.8
DCAR_019875 Daucus carota HOM05D003715 ORTHO05D003958 1.5e-36 157.5 285 38.2
VMungo0464G1653 Vigna mungo HOM05D003715 ORTHO05D003958 1.5e-36 157.5 296 39.2
Sed0002226 Sechium edule HOM05D003715 ORTHO05D003958 3.2e-36 156.4 307 37.1
Nitab4.5_0002769g0040 Nicotiana tabacum HOM05D003715 ORTHO05D003958 9.4e-36 154.8 285 37.9
Gorai.007G262000 Gossypium raimondii HOM05D003715 ORTHO05D003958 2.7e-35 153.3 292 37.0
Prupe.7G006100 Prunus persica HOM05D003715 ORTHO05D003958 2.7e-35 153.3 313 38.0
Peaxi162Scf00463g00019 Petunia axillaris HOM05D003715 ORTHO05D003958 4.7e-35 152.5 299 37.1
CiPaw.09G002400 Carya illinoinensis HOM05D003715 ORTHO05D003958 1.0e-34 151.4 268 41.0
Hund19231 Selenicereus undatus HOM05D003715 ORTHO05D003958 1.0e-34 151.4 290 37.2
Gohir.A11G235300 Gossypium hirsutum HOM05D003715 ORTHO05D003958 1.8e-34 150.6 291 37.1
Gohir.D11G246200 Gossypium hirsutum HOM05D003715 ORTHO05D003958 8.8e-34 148.3 292 36.3
Sc13g0002630 Simmondsia chinensis HOM05D003715 ORTHO05D003958 2.6e-33 146.7 307 35.8
Glyma.16G153700 Glycine max HOM05D003715 ORTHO05D003958 4.4e-33 146.0 281 38.4
Ca_08274_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 7.5e-33 145.2 279 38.0
Sed0021221 Sechium edule HOM05D003715 ORTHO05D003958 1.7e-32 144.1 286 35.3
Nitab4.5_0000658g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 2.2e-32 143.7 316 35.4
Phvul.004G080700 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 2.8e-32 143.3 297 38.0
Glyma.02G072500 Glycine max HOM05D003715 ORTHO05D003958 8.2e-32 141.7 290 39.0
Sp3g02840 Schrenkiella parvula HOM05D003715 ORTHO05D003958 1.1e-31 141.4 290 35.5
COL.COLO4_36085 Corchorus olitorius HOM05D003715 ORTHO05D003958 1.4e-31 141.0 300 37.0
SGA_v2.0_scaffold94G28404 Striga asiatica HOM05D003715 ORTHO05D003958 1.8e-31 140.6 276 39.5
arahy.Tifrunner.gnm1.ann1.V3MY1S Arachis hypogaea HOM05D003715 ORTHO05D003958 3.1e-31 139.8 270 34.1
Medtr7g085790 Medicago truncatula HOM05D003715 ORTHO05D003958 2.0e-30 137.1 286 36.4
Lj1g0002462 Lotus japonicus HOM05D003715 ORTHO05D003958 2.7e-30 136.7 283 37.1
Lj1g0012553 Lotus japonicus HOM05D003715 ORTHO05D003958 3.5e-30 136.3 299 37.5
Psat3g088760 Pisum sativum HOM05D003715 ORTHO05D003958 4.5e-30 136.0 273 39.6
Ca_04486_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 1.0e-29 134.8 273 37.0
Aqoxy1G00472 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 2.2e-29 133.7 290 37.6
A02p04750 Brassica napus HOM05D003715 ORTHO05D003958 3.8e-29 132.9 285 33.3
C02p09710 Brassica napus HOM05D003715 ORTHO05D003958 3.8e-29 132.9 283 33.6
EL10Ac3g06828 Beta vulgaris HOM05D003715 ORTHO05D003958 5.0e-29 132.5 287 36.9
BolC2t06880H Brassica oleracea HOM05D003715 ORTHO05D003958 5.0e-29 132.5 283 33.6
TPR.G5870 Trifolium pratense HOM05D003715 ORTHO05D003958 6.5e-29 132.1 284 36.3
Lalb_Chr22g0359081 Lupinus albus HOM05D003715 ORTHO05D003958 8.5e-29 131.7 302 39.1
Sp6g26180 Schrenkiella parvula HOM05D003715 ORTHO05D003958 8.5e-29 131.7 293 34.8
TPR.G9142 Trifolium pratense HOM05D003715 ORTHO05D003958 1.5e-28 131.0 269 35.3
TAR633G2325 Trochodendron aralioides HOM05D003715 ORTHO05D003958 1.5e-28 131.0 181 49.7
Carub.0006s1642 Capsella rubella HOM05D003715 ORTHO05D003958 2.5e-28 130.2 285 34.0
Carub.0003s0306 Capsella rubella HOM05D003715 ORTHO05D003958 3.2e-28 129.8 286 34.6
CANSAT78G1806 Cannabis sativa HOM05D003715 ORTHO05D003958 4.2e-28 129.4 303 32.3
Thhalv10021350m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 4.2e-28 129.4 285 34.4
vmacro09135 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 7.2e-28 128.6 241 39.0
BcaB01g06399 Brassica carinata HOM05D003715 ORTHO05D003958 9.4e-28 128.3 281 36.7
Medtr6g029250 Medicago truncatula HOM05D003715 ORTHO05D003958 1.2e-27 127.9 267 36.7
Thhalv10014292m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 1.6e-27 127.5 298 33.2
BolC3t13497H Brassica oleracea HOM05D003715 ORTHO05D003958 2.1e-27 127.1 292 34.6
BcaB01g05177 Brassica carinata HOM05D003715 ORTHO05D003958 2.7e-27 126.7 292 34.6
BcaC03g13579 Brassica carinata HOM05D003715 ORTHO05D003958 2.7e-27 126.7 283 32.5
C03p10110 Brassica napus HOM05D003715 ORTHO05D003958 2.7e-27 126.7 292 34.6
BraA03t10190Z Brassica rapa HOM05D003715 ORTHO05D003958 2.7e-27 126.7 292 34.6
ATR0737G080 Amborella trichopoda HOM05D003715 ORTHO05D003958 3.6e-27 126.3 302 34.4
AT5G18130 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 3.6e-27 126.3 292 34.2
A03p08670 Brassica napus HOM05D003715 ORTHO05D003958 4.7e-27 125.9 283 34.6
Psat1g091040 Pisum sativum HOM05D003715 ORTHO05D003958 4.7e-27 125.9 269 35.3
BraA02t05434Z Brassica rapa HOM05D003715 ORTHO05D003958 8.0e-27 125.2 282 33.0
FvH4_1g28230 Fragaria vesca HOM05D003715 ORTHO05D003958 8.0e-27 125.2 296 35.1
HanXRQChr14g0438161 Helianthus annuus HOM05D003715 ORTHO05D003958 8.0e-27 125.2 286 37.4
Nitab4.5_0000358g0150 Nicotiana tabacum HOM05D003715 ORTHO05D003958 8.0e-27 125.2 290 36.9
RcHm_v2.0_Chr3g0497011 Rosa chinensis HOM05D003715 ORTHO05D003958 8.0e-27 125.2 320 37.5
AL3G13760 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 1.4e-26 124.4 284 33.8
Eucgr.K01502 Eucalyptus grandis HOM05D003715 ORTHO05D003958 1.4e-26 124.4 287 36.6
THA.LOC104820776 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 2.3e-26 123.6 295 33.2
AL6G29330 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 3.0e-26 123.2 293 34.1
A10p21370 Brassica napus HOM05D003715 ORTHO05D003958 3.0e-26 123.2 288 32.6
BcaNung05741 Brassica carinata HOM05D003715 ORTHO05D003958 4.0e-26 122.9 291 33.7
AT3G03870 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 5.2e-26 122.5 288 33.3
FAN23G0877 Fragaria x ananassa HOM05D003715 ORTHO05D003958 5.2e-26 122.5 294 35.0
FAN26G1768 Fragaria x ananassa HOM05D003715 ORTHO05D003958 5.2e-26 122.5 293 34.8
Rhsim04G0091400 Rhododendron simsii HOM05D006013 ORTHO05D007383 6.8e-26 122.1 252 36.9
CDE02G4343 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 8.8e-26 121.7 294 33.7
Duzib128G0041 Durio zibethinus HOM05D003715 ORTHO05D003958 8.8e-26 121.7 284 32.7
CARHR194940 Cardamine hirsuta HOM05D003715 ORTHO05D003958 1.5e-25 120.9 299 34.8
Glyma.16G040300 Glycine max HOM05D003715 ORTHO05D003958 2.0e-25 120.6 285 35.1
BolC1t05801H Brassica oleracea HOM05D003715 ORTHO05D003958 2.6e-25 120.2 287 33.1
ECA233G0839 Erigeron canadensis HOM05D003715 ORTHO05D003958 3.4e-25 119.8 272 33.8
FAN28G3019 Fragaria x ananassa HOM05D003715 ORTHO05D003958 9.8e-25 118.2 296 34.5
BcaB05g23302 Brassica carinata HOM05D003715 ORTHO05D003958 1.3e-24 117.9 291 32.0
C09p58840 Brassica napus HOM05D003715 ORTHO05D003958 1.3e-24 117.9 289 32.2
SalBow1G3164 Salvia bowleyana HOM05D003715 ORTHO05D003958 1.3e-24 117.9 266 35.0
CARHR077990 Cardamine hirsuta HOM05D003715 ORTHO05D003958 2.8e-24 116.7 277 33.9
BraA10t44200Z Brassica rapa HOM05D003715 ORTHO05D003958 3.7e-24 116.3 272 32.7
Cpa.g.sc51.130 Carica papaya HOM05D003715 ORTHO05D003958 3.7e-24 116.3 302 32.8
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 4.8e-24 115.9 173 40.5
BcaC05g30247 Brassica carinata HOM05D003715 ORTHO05D003958 6.3e-24 115.5 283 33.9
Actinidia38611 Actinidia chinensis HOM05D003715 ORTHO05D003958 8.3e-24 115.2 262 35.1
ECA238G2879 Erigeron canadensis HOM05D003715 ORTHO05D003958 1.8e-23 114.0 283 36.0
Cc06_g23060 Coffea canephora HOM05D003715 ORTHO05D003958 2.4e-23 113.6 166 42.8
A05p43520 Brassica napus HOM05D003715 ORTHO05D003958 3.1e-23 113.2 290 33.4
Glyma.19G112800 Glycine max HOM05D003715 ORTHO05D003958 5.4e-23 112.5 286 33.9
MBI04_g37012_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 5.4e-23 112.5 177 45.8
BolC9t58728H Brassica oleracea HOM05D003715 ORTHO05D003958 1.6e-22 110.9 273 31.5
CDE05G3048 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 3.5e-22 109.8 304 31.2
Lalb_Chr14g0364551 Lupinus albus HOM05D003715 ORTHO05D003958 5.9e-22 109.0 276 33.7
BcaC05g29901 Brassica carinata HOM05D003715 ORTHO05D003958 1.7e-21 107.5 285 32.3
BolC5t34973H Brassica oleracea HOM05D003715 ORTHO05D003958 1.7e-21 107.5 285 32.3
BraA05t23092Z Brassica rapa HOM05D003715 ORTHO05D003958 2.2e-21 107.1 286 32.5
Phvul.001G111500 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 2.2e-21 107.1 309 33.0
HanXRQChr13g0397871 Helianthus annuus HOM05D003715 ORTHO05D003958 5.0e-21 105.9 278 33.5
Nitab4.5_0000394g0140 Nicotiana tabacum HOM05D003715 ORTHO05D003958 3.2e-20 103.2 295 33.2
Aa31LG11G11470 Aethionema arabicum HOM05D003715 ORTHO05D003958 9.5e-20 101.7 110 49.1
Lsat_1_v5_gn_6_37461 Lactuca sativa HOM05D003715 ORTHO05D003958 9.5e-20 101.7 237 33.8
BcaB08g36703 Brassica carinata HOM05D003715 ORTHO05D003958 2.1e-19 100.5 288 30.6
VMungo1383G2890 Vigna mungo HOM05D003715 ORTHO05D003958 6.1e-19 99.0 287 29.6
HanXRQChr02g0054571 Helianthus annuus HOM05D003715 ORTHO05D003958 1.4e-18 97.8 279 33.7
Nitab4.5_0009367g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.4e-18 97.8 270 30.0
Os03g0806600 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 4.0e-18 96.3 143 40.6
Ah.04g153150 Amaranthus hybridus HOM05D003715 ORTHO05D003958 1.2e-17 94.7 287 30.3
CSS0027479 Camellia sinensis var. sinensis HOM05D003715 ORTHO05D003958 1.5e-17 94.4 97 51.5
PSO384G3057 Papaver somniferum HOM05D003715 ORTHO05D003958 3.4e-17 93.2 142 41.5
FAN19G0160 Fragaria x ananassa HOM05D003715 ORTHO05D003958 4.4e-17 92.8 271 32.8
Nitab4.5_0001079g0120 Nicotiana tabacum HOM05D003715 ORTHO05D003958 9.8e-17 91.7 171 35.7
Solyc10g080670.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 9.8e-17 91.7 267 33.0
BcaC05g30288 Brassica carinata HOM05D003715 ORTHO05D003958 1.3e-16 91.3 88 51.1
AUR62032043 Chenopodium quinoa HOM05D003715 ORTHO05D003958 1.3e-16 91.3 285 31.6
Aa31LG5G14450 Aethionema arabicum HOM05D003715 ORTHO05D003958 2.2e-16 90.5 286 30.4
Duzib106G0556 Durio zibethinus HOM05D003715 ORTHO05D003958 2.2e-16 90.5 224 33.5
AUR62032710 Chenopodium quinoa HOM05D003715 ORTHO05D003958 6.3e-16 89.0 283 30.7
Zm00001eb302900 Zea mays HOM05D003715 ORTHO05D003958 8.3e-16 88.6 95 49.5
Sopen10g031210 Solanum pennellii HOM05D003715 ORTHO05D003958 1.4e-15 87.8 265 30.9
arahy.Tifrunner.gnm1.ann1.KTU7AY Arachis hypogaea HOM05D003715 ORTHO05D003958 3.1e-15 86.7 278 28.4
THA.LOC104802870 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 9.2e-15 85.1 303 28.7
PSO782G0808 Papaver somniferum HOM05D003715 ORTHO05D003958 5.0e-13 79.3 137 40.1
Lsat_1_v5_gn_2_58261 Lactuca sativa HOM05D003715 ORTHO05D003958 6.6e-13 79.0 215 34.0
HPP92_014229 Vanilla planifolia HOM05D035551 ORTHO05D003958 1.5e-12 77.8 279 32.6
PGSC0003DMG400023700 Solanum tuberosum HOM05D003715 ORTHO05D003958 5.6e-12 75.9 268 28.7
VMungo1383G0996 Vigna mungo HOM05D002467 ORTHO05D013374 5.6e-12 75.9 75 54.7
Os07g0204100 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 7.3e-12 75.5 94 46.8
arahy.Tifrunner.gnm1.ann1.85Z4HY Arachis hypogaea HOM05D003715 ORTHO05D003958 8.0e-11 72.0 269 26.0
THA.LOC104827275 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 4.0e-10 69.7 267 28.5
arahy.Tifrunner.gnm1.ann1.FCYU2S Arachis hypogaea HOM05D003715 ORTHO05D003958 1.2e-09 68.2 281 27.8
Peaxi162Scf00249g00717 Petunia axillaris HOM05D003715 ORTHO05D003958 4.4e-09 66.2 205 28.3
SEGI_20586 Sequoiadendron giganteum HOM05D003715 ORTHO05D003958 4.9e-08 62.8 103 44.7
CDE02G1486 Ceratophyllum demersum HOM05D002360 ORTHO05D006297 7.0e-07 58.9 124 35.5
Zm00001eb160970 Zea mays HOM05D015210 ORTHO05D003958 4.6e-06 56.2 75 46.7
Zm00001eb160910 Zea mays HOM05D015210 ORTHO05D003958 5.9e-06 55.8 75 45.3
Zm00001eb160980 Zea mays HOM05D015210 ORTHO05D003958 7.8e-06 55.5 75 45.3


User provided reference genes

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