Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 7.3e-130 467.2 235 100.0
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 1.2e-23 114.4 188 44.7
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 1.0e-22 111.3 177 43.5
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 2.3e-19 100.1 182 42.3
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 7.5e-18 95.1 169 39.6
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 1.7e-17 94.0 180 40.6
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 1.4e-16 90.9 168 40.5
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 1.4e-16 90.9 177 40.1
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 1.6e-15 87.4 191 37.7
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 1.6e-15 87.4 191 37.7
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 2.7e-15 86.7 185 35.7
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 2.7e-15 86.7 213 36.2
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 3.0e-14 83.2 184 34.8
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 5.0e-14 82.4 185 34.6
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 6.6e-14 82.0 178 36.5
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 1.1e-13 81.3 177 35.6
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 1.1e-13 81.3 175 36.0
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 1.1e-13 81.3 174 36.2
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 1.1e-13 81.3 167 38.3
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 1.1e-13 81.3 180 38.3
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 1.5e-13 80.9 188 37.2
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 1.9e-13 80.5 169 37.9
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.5e-13 80.1 197 34.0
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 3.3e-13 79.7 183 34.4
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 4.3e-13 79.3 198 33.8
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 7.3e-13 78.6 185 35.1
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 7.3e-13 78.6 196 35.2
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 9.5e-13 78.2 148 39.2
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 9.5e-13 78.2 196 35.2
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 9.5e-13 78.2 192 37.0
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 1.2e-12 77.8 188 33.5
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 1.6e-12 77.4 99 47.5
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 1.6e-12 77.4 195 33.3
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 2.1e-12 77.0 138 41.3
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 2.1e-12 77.0 183 35.5
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 2.8e-12 76.6 143 38.5
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 3.6e-12 76.3 181 34.3
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 3.6e-12 76.3 180 34.4
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 3.6e-12 76.3 200 33.5
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 4.7e-12 75.9 178 35.4
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 4.7e-12 75.9 182 35.7
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 6.2e-12 75.5 171 35.1
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 8.0e-12 75.1 175 36.0
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 8.0e-12 75.1 197 32.5
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 1.0e-11 74.7 202 33.7
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 1.0e-11 74.7 176 32.4
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 1.8e-11 73.9 172 35.5
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 2.3e-11 73.6 178 34.3
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 3.1e-11 73.2 183 33.9
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 3.1e-11 73.2 66 59.1
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 5.2e-11 72.4 185 34.6
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 5.2e-11 72.4 161 38.5
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 5.2e-11 72.4 183 33.9
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 5.2e-11 72.4 175 32.6
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 5.2e-11 72.4 167 34.7
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 6.8e-11 72.0 192 33.3
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 6.8e-11 72.0 197 31.5
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 8.9e-11 71.6 187 34.2
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 1.2e-10 71.2 214 32.2
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 1.2e-10 71.2 190 34.2
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 1.5e-10 70.9 99 41.4
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 1.5e-10 70.9 187 34.2
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 1.5e-10 70.9 179 35.2
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 2.0e-10 70.5 124 45.2
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 2.0e-10 70.5 107 45.8
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 2.6e-10 70.1 126 38.9
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 2.6e-10 70.1 215 31.6
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 9.8e-10 68.2 188 34.0
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 1.3e-09 67.8 178 34.8
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 1.7e-09 67.4 196 33.2
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 1.7e-09 67.4 182 31.9
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 1.7e-09 67.4 204 30.4
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 2.2e-09 67.0 204 32.4
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 2.9e-09 66.6 101 44.6
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 2.9e-09 66.6 161 35.4
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 2.9e-09 66.6 194 33.0
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 2.9e-09 66.6 122 37.7
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 3.7e-09 66.2 140 37.1
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 3.7e-09 66.2 182 33.0
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 3.7e-09 66.2 187 31.6
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 3.7e-09 66.2 186 32.3
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 6.4e-09 65.5 96 44.8
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 6.4e-09 65.5 97 44.3
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 8.3e-09 65.1 122 37.7
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 1.1e-08 64.7 178 33.7
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 1.4e-08 64.3 183 31.7
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 1.9e-08 63.9 186 32.8
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 1.9e-08 63.9 224 28.1
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 2.4e-08 63.5 168 33.3
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 3.2e-08 63.2 186 32.3
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 4.1e-08 62.8 222 28.8
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 7.0e-08 62.0 142 35.2
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 7.0e-08 62.0 146 32.9
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 9.2e-08 61.6 175 33.1
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.0e-07 60.5 116 39.7
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 2.0e-07 60.5 181 32.6
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 4.6e-07 59.3 77 41.6
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 7.8e-07 58.5 174 32.8
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 7.8e-07 58.5 71 47.9
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 7.8e-07 58.5 75 44.0
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 1.0e-06 58.2 191 27.7
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 2.3e-06 57.0 172 33.7


User provided reference genes

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