Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 4.3e-115 417.9 202 100.0
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 1.4e-100 369.8 201 89.1
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 3.0e-100 368.6 202 89.6
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 5.0e-95 351.3 201 85.6
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 6.5e-95 350.9 201 84.1
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 1.5e-94 349.7 202 84.2
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 9.4e-94 347.1 202 84.2
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 1.2e-93 346.7 203 82.3
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 4.7e-93 344.7 204 83.8
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 6.1e-93 344.4 205 84.4
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 1.4e-92 343.2 201 83.1
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 2.3e-92 342.4 204 81.9
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 6.8e-92 340.9 204 83.8
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 6.8e-92 340.9 201 83.6
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 6.8e-92 340.9 201 83.6
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 8.8e-92 340.5 201 83.6
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 1.2e-91 340.1 204 83.3
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 3.4e-91 338.6 201 81.1
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 3.4e-91 338.6 205 82.4
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 3.4e-91 338.6 202 83.2
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 4.4e-91 338.2 201 83.6
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 4.4e-91 338.2 201 83.1
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 2.2e-90 335.9 201 82.1
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 2.8e-90 335.5 212 77.8
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 1.4e-89 333.2 203 79.8
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 2.4e-89 332.4 175 89.7
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 7.0e-89 330.9 201 80.1
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 1.2e-88 330.1 203 81.8
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 1.2e-88 330.1 209 79.9
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 1.0e-87 327.0 212 78.3
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 1.1e-86 323.6 195 79.5
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 1.5e-86 323.2 212 75.5
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 2.5e-86 322.4 201 78.1
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 4.2e-86 321.6 169 87.6
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 3.6e-85 318.5 201 77.6
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 3.6e-85 318.5 202 79.7
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 4.7e-85 318.2 201 76.1
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 4.7e-85 318.2 170 88.2
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 6.1e-85 317.8 202 78.2
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 1.0e-84 317.0 201 76.1
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 1.0e-84 317.0 202 78.7
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 1.4e-84 316.6 200 78.5
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 1.8e-84 316.2 167 87.4
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 2.3e-84 315.8 201 77.6
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 2.3e-84 315.8 201 77.6
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 2.3e-84 315.8 201 77.6
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 2.3e-84 315.8 201 77.6
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 2.3e-84 315.8 201 77.6
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 3.0e-84 315.5 230 72.6
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 3.0e-84 315.5 166 86.7
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 3.0e-84 315.5 198 77.8
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 3.0e-84 315.5 208 75.5
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 4.0e-84 315.1 171 84.8
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 6.8e-84 314.3 180 83.3
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 8.8e-84 313.9 197 77.2
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 8.8e-84 313.9 205 73.2
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 8.8e-84 313.9 198 75.8
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 1.2e-83 313.5 203 76.8
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.2e-83 313.5 201 77.1
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 1.5e-83 313.2 201 79.6
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 1.5e-83 313.2 202 77.2
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 2.6e-83 312.4 202 76.2
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 2.6e-83 312.4 171 84.2
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 5.7e-83 311.2 196 79.6
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 7.5e-83 310.8 173 85.0
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 7.5e-83 310.8 201 74.6
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 7.5e-83 310.8 204 77.0
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 9.8e-83 310.5 171 84.2
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 1.3e-82 310.1 167 83.8
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 1.7e-82 309.7 190 78.4
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 2.4e-81 305.8 177 83.1
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 4.1e-81 305.1 177 81.9
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 4.1e-81 305.1 204 71.1
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 9.1e-81 303.9 203 73.4
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 2.0e-80 302.8 204 74.5
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 2.7e-80 302.4 202 76.2
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 1.3e-79 300.1 199 73.4
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.9e-78 296.2 170 82.9
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 2.5e-78 295.8 169 82.8
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 1.5e-75 286.6 170 80.6
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 3.4e-75 285.4 182 77.5
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 1.7e-74 283.1 172 82.6
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 4.1e-73 278.5 176 79.5
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 1.2e-72 276.9 164 81.1
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 1.6e-72 276.6 180 79.4
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 1.7e-71 273.1 182 75.3
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 8.6e-71 270.8 167 76.6
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 8.0e-69 264.2 141 85.8
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 2.0e-67 259.6 153 81.0
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 2.0e-67 259.6 137 86.1
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 2.6e-67 259.2 203 66.0
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 3.2e-65 252.3 137 83.9
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 4.1e-65 251.9 163 72.4
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 5.2e-60 235.0 163 66.9
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 7.5e-59 231.1 161 72.7
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 1.1e-57 227.3 166 63.3
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 1.9e-57 226.5 111 95.5
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 7.1e-57 224.6 152 71.1
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 1.3e-50 203.8 174 62.6
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 2.1e-48 196.4 170 56.5
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 6.9e-28 128.3 140 43.6
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.3e-18 97.4 165 38.2
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 2.2e-10 70.1 133 36.8
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 8.4e-10 68.2 37 81.1
Cre16.g683300 Chlamydomonas reinhardtii HOM05D027270 ORTHO05D017832 3.3e-06 56.2 132 31.8
SMO356G0017 Selaginella moellendorffii HOM05D007351 ORTHO05D017832 3.3e-06 56.2 133 37.6


User provided reference genes

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