Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g11898 Nelumbo nucifera HOM05D004606 ORTHO05D005086 2.1e-51 205.3 97 100.0
Nn2g11896 Nelumbo nucifera HOM05D004606 ORTHO05D005086 3.4e-09 65.1 37 83.8
TAR626G1705 Trochodendron aralioides HOM05D004606 ORTHO05D005086 5.9e-09 64.3 36 80.6
Cfa013195 Carpinus fangiana HOM05D004606 ORTHO05D005086 2.2e-08 62.4 34 82.4
Cc11_g01620 Coffea canephora HOM05D004606 ORTHO05D005086 2.2e-08 62.4 36 80.6
Haze_21597 Corylus avellana HOM05D004606 ORTHO05D005086 2.2e-08 62.4 34 82.4
Eucgr.C02820 Eucalyptus grandis HOM05D004606 ORTHO05D005086 2.2e-08 62.4 40 70.0
Eucgr.L01636 Eucalyptus grandis HOM05D004606 ORTHO05D005086 2.2e-08 62.4 40 70.0
Dinv11601 Davidia involucrata HOM05D004606 ORTHO05D005086 2.9e-08 62.0 34 82.4
GSVIVG01035774001 Vitis vinifera HOM05D004606 ORTHO05D005086 6.5e-08 60.8 37 70.3
Cc11_g01610 Coffea canephora HOM05D004606 ORTHO05D005086 8.5e-08 60.5 34 82.4
Hma1.2p1_0000F.1_g000990 Hydrangea macrophylla HOM05D004606 ORTHO05D005086 8.5e-08 60.5 34 79.4
MBI04_g33818_MAGBIO Magnolia biondii HOM05D004606 ORTHO05D005086 1.4e-07 59.7 44 63.6
Oeu031575.3 Olea europaea HOM05D004606 ORTHO05D005086 1.4e-07 59.7 34 82.4
PGR044G1635 Punica granatum HOM05D004606 ORTHO05D005086 1.4e-07 59.7 37 73.0
RcHm_v2.0_Chr6g0298811 Rosa chinensis HOM05D004606 ORTHO05D005086 1.4e-07 59.7 34 76.5
Manes.16G118200 Manihot esculenta HOM05D004606 ORTHO05D005086 2.5e-07 58.9 36 75.0
QL04p042370 Quercus lobata HOM05D004606 ORTHO05D005086 2.5e-07 58.9 34 76.5
QL04p042401 Quercus lobata HOM05D004606 ORTHO05D005086 2.5e-07 58.9 34 76.5
QL04p042484 Quercus lobata HOM05D004606 ORTHO05D005086 2.5e-07 58.9 34 76.5
Thecc.09G147400 Theobroma cacao HOM05D004606 ORTHO05D005086 2.5e-07 58.9 36 69.4
COL.COLO4_24006 Corchorus olitorius HOM05D004606 ORTHO05D005086 3.2e-07 58.5 37 67.6
Eucgr.C02825 Eucalyptus grandis HOM05D004606 ORTHO05D005086 4.2e-07 58.2 40 67.5
Eucgr.C02823 Eucalyptus grandis HOM05D004606 ORTHO05D005086 5.5e-07 57.8 40 67.5
Eucgr.L02556 Eucalyptus grandis HOM05D004606 ORTHO05D005086 5.5e-07 57.8 40 67.5
Sc09g0008700 Simmondsia chinensis HOM05D004606 ORTHO05D005086 7.2e-07 57.4 34 76.5
ClCG08G013020 Citrullus lanatus HOM05D004606 ORTHO05D005086 9.3e-07 57.0 37 67.6
Eucgr.C02822 Eucalyptus grandis HOM05D004606 ORTHO05D005086 9.3e-07 57.0 33 75.8
Eucgr.L01635 Eucalyptus grandis HOM05D004606 ORTHO05D005086 9.3e-07 57.0 33 75.8
Lj7C716G6 Lonicera japonica HOM05D004606 ORTHO05D005086 9.3e-07 57.0 37 70.3
PGR044G1641 Punica granatum HOM05D004606 ORTHO05D005086 9.3e-07 57.0 36 72.2
PSO017G2258 Papaver somniferum HOM05D004606 ORTHO05D005086 1.2e-06 56.6 33 78.8
PSO170G2975 Papaver somniferum HOM05D004606 ORTHO05D005086 1.2e-06 56.6 33 78.8
Eucgr.C02829 Eucalyptus grandis HOM05D004606 ORTHO05D005086 1.6e-06 56.2 40 65.0
Oeu045188.1 Olea europaea HOM05D004606 ORTHO05D005086 1.6e-06 56.2 33 81.8
Oeu045189.1 Olea europaea HOM05D004606 ORTHO05D005086 1.6e-06 56.2 33 81.8
Oeu045190.1 Olea europaea HOM05D004606 ORTHO05D005086 1.6e-06 56.2 33 81.8
TWI63G0154 Tripterygium wilfordii HOM05D004606 ORTHO05D005086 1.6e-06 56.2 37 73.0
Aqoxy7G01977_Aqoxy7G01978 Aquilegia oxysepala HOM05D004606 ORTHO05D005086 2.1e-06 55.8 34 76.5
BcaC04g19239 Brassica carinata HOM05D004606 ORTHO05D005086 2.1e-06 55.8 36 66.7
C09p65540 Brassica napus HOM05D004606 ORTHO05D005086 2.1e-06 55.8 36 66.7
CARHR201940 Cardamine hirsuta HOM05D004606 ORTHO05D005086 2.1e-06 55.8 36 69.4
Duzib187G0213 Durio zibethinus HOM05D004606 ORTHO05D005086 2.1e-06 55.8 36 63.9
Potri.018G032500 Populus trichocarpa HOM05D004606 ORTHO05D005086 2.7e-06 55.5 33 75.8
PGR044G0860 Punica granatum HOM05D004606 ORTHO05D005086 2.7e-06 55.5 32 78.1
Sopen08g021410 Solanum pennellii HOM05D004606 ORTHO05D005086 2.7e-06 55.5 33 75.8
Ciclev10008268m.g Citrus clementina HOM05D004606 ORTHO05D005086 3.6e-06 55.1 36 69.4
Ciclev10008396m.g Citrus clementina HOM05D004606 ORTHO05D005086 3.6e-06 55.1 37 67.6
Prupe.1G471700 Prunus persica HOM05D004606 ORTHO05D005086 3.6e-06 55.1 33 72.7
SalBow4G2310 Salvia bowleyana HOM05D004606 ORTHO05D005086 3.6e-06 55.1 36 77.8
Atru.chr7.2235 Acer truncatum HOM05D004606 ORTHO05D005086 4.6e-06 54.7 37 64.9
AL6G21980 Arabidopsis lyrata HOM05D004606 ORTHO05D005086 4.6e-06 54.7 37 64.9
CiPaw.07G219400 Carya illinoinensis HOM05D004606 ORTHO05D005086 4.6e-06 54.7 33 72.7
ClCG08G013030 Citrullus lanatus HOM05D004606 ORTHO05D005086 4.6e-06 54.7 36 69.4
FvH4_2g29790 Fragaria vesca HOM05D004606 ORTHO05D005086 4.6e-06 54.7 33 72.7
FAN15G1610 Fragaria x ananassa HOM05D004606 ORTHO05D005086 4.6e-06 54.7 33 72.7
FAN24G2357 Fragaria x ananassa HOM05D004606 ORTHO05D005086 4.6e-06 54.7 33 72.7
FAN27G1511 Fragaria x ananassa HOM05D004606 ORTHO05D005086 4.6e-06 54.7 33 72.7
Solyc08g067470.3 Solanum lycopersicum HOM05D004606 ORTHO05D005086 4.6e-06 54.7 33 72.7
BcaB08g37070 Brassica carinata HOM05D004606 ORTHO05D005086 6.1e-06 54.3 33 66.7
Carub.0006s0979 Capsella rubella HOM05D004606 ORTHO05D005086 6.1e-06 54.3 37 62.2
AUR62032354 Chenopodium quinoa HOM05D004606 ORTHO05D005086 6.1e-06 54.3 33 75.8
Migut.A00299 Erythranthe guttata HOM05D004606 ORTHO05D005086 6.1e-06 54.3 36 72.2
Thhalv10013697m.g Eutrema salsugineum HOM05D004606 ORTHO05D005086 6.1e-06 54.3 37 64.9
MD08G1141800 Malus domestica HOM05D004606 ORTHO05D005086 6.1e-06 54.3 34 64.7
PGSC0003DMG400025535 Solanum tuberosum HOM05D004606 ORTHO05D005086 6.1e-06 54.3 33 72.7
A10p26400 Brassica napus HOM05D004606 ORTHO05D005086 7.9e-06 53.9 33 69.7
BolC9t59377H Brassica oleracea HOM05D004606 ORTHO05D005086 7.9e-06 53.9 33 69.7
Migut.A00294 Erythranthe guttata HOM05D004606 ORTHO05D005086 7.9e-06 53.9 33 75.8
Migut.A00298 Erythranthe guttata HOM05D004606 ORTHO05D005086 7.9e-06 53.9 33 75.8
Glyma.17G206700 Glycine max HOM05D004606 ORTHO05D005086 7.9e-06 53.9 33 72.7
Rhsim02G0193100 Rhododendron simsii HOM05D004606 ORTHO05D005086 7.9e-06 53.9 33 75.8
Sp6g32250 Schrenkiella parvula HOM05D004606 ORTHO05D005086 7.9e-06 53.9 33 69.7


User provided reference genes

Program Settings