Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g11790 Nelumbo nucifera HOM05D004642 ORTHO05D005466 1.9e-277 959.1 740 100.0
Nn8g39228 Nelumbo nucifera HOM05D004642 ORTHO05D005466 2.9e-140 503.4 729 68.4
Prupe.3G071700 Prunus persica HOM05D004642 ORTHO05D005466 4.2e-99 366.7 723 44.0
Potri.001G179600 Populus trichocarpa HOM05D004642 ORTHO05D005466 3.0e-89 334.0 716 44.1
TAR626G0806 Trochodendron aralioides HOM05D004642 ORTHO05D005466 1.7e-84 318.2 702 46.0
Actinidia08974 Actinidia chinensis HOM05D004642 ORTHO05D005466 2.3e-81 307.8 733 47.6
QL05p024308 Quercus lobata HOM05D004642 ORTHO05D005466 8.8e-81 305.8 733 40.2
MD17G1195700 Malus domestica HOM05D004642 ORTHO05D005466 1.8e-78 298.1 728 44.5
PSO782G0786 Papaver somniferum HOM05D004642 ORTHO05D005466 1.8e-78 298.1 724 42.3
Cfa002061 Carpinus fangiana HOM05D004642 ORTHO05D005466 2.7e-77 294.3 727 42.6
PSO063G4770 Papaver somniferum HOM05D004642 ORTHO05D005466 4.2e-67 260.4 724 46.7
Cc04_g03480 Coffea canephora HOM05D004642 ORTHO05D005466 1.0e-65 255.8 690 34.9
GSVIVG01017115001 Vitis vinifera HOM05D004642 ORTHO05D005466 5.7e-64 250.0 512 46.9
vmacro18915 Vaccinium macrocarpon HOM05D004642 ORTHO05D005466 7.5e-64 249.6 695 31.4
Aqoxy7G01787 Aquilegia oxysepala HOM05D004642 ORTHO05D005466 1.7e-63 248.4 738 44.7
Rhsim12G0197600 Rhododendron simsii HOM05D004642 ORTHO05D005466 8.3e-63 246.1 733 50.3
CiPaw.02G151400 Carya illinoinensis HOM05D004642 ORTHO05D005466 1.8e-62 245.0 717 42.8
Haze_16437 Corylus avellana HOM05D004642 ORTHO05D005466 3.2e-62 244.2 623 37.9
Duzib235G0715 Durio zibethinus HOM05D004642 ORTHO05D005466 1.2e-61 242.3 757 41.5
Actinidia24760 Actinidia chinensis HOM05D004642 ORTHO05D005466 1.6e-61 241.9 506 38.1
Gohir.A09G083200 Gossypium hirsutum HOM05D004642 ORTHO05D005466 4.5e-61 240.4 545 34.7
Thecc.06G086400 Theobroma cacao HOM05D004642 ORTHO05D005466 7.8e-61 239.6 765 38.7
Gohir.D09G083200 Gossypium hirsutum HOM05D004642 ORTHO05D005466 1.9e-59 235.0 544 34.2
Rhsim08G0221000 Rhododendron simsii HOM05D004642 ORTHO05D005466 1.9e-59 235.0 706 36.0
Gorai.006G098800 Gossypium raimondii HOM05D004642 ORTHO05D005466 5.6e-59 233.4 546 33.0
CiPaw.01G239700 Carya illinoinensis HOM05D004642 ORTHO05D005466 2.8e-58 231.1 732 45.1
Sabra01G0147200 Salix brachista HOM05D004642 ORTHO05D005466 4.7e-58 230.3 833 38.3
MD09G1213800 Malus domestica HOM05D004642 ORTHO05D005466 1.8e-57 228.4 709 45.4
Lalb_Chr14g0373421 Lupinus albus HOM05D004642 ORTHO05D005466 2.0e-56 224.9 667 38.1
Gorai.009G133100 Gossypium raimondii HOM05D004642 ORTHO05D005466 1.3e-55 222.2 511 32.5
Nitab4.5_0005851g0030 Nicotiana tabacum HOM05D004642 ORTHO05D005466 3.7e-55 220.7 723 32.4
vmacro16950 Vaccinium macrocarpon HOM05D004642 ORTHO05D005466 3.7e-55 220.7 730 47.4
Gohir.A05G129515 Gossypium hirsutum HOM05D004642 ORTHO05D005466 9.2e-54 216.1 514 32.1
Gohir.D05G129000 Gossypium hirsutum HOM05D004642 ORTHO05D005466 1.2e-53 215.7 511 32.1
MELO3C024228.2 Cucumis melo HOM05D004642 ORTHO05D005466 7.8e-53 213.0 443 35.4
PGR102G3321 Punica granatum HOM05D004642 ORTHO05D005466 1.7e-52 211.8 508 37.2
Nitab4.5_0000671g0060 Nicotiana tabacum HOM05D004642 ORTHO05D005466 1.1e-51 209.1 696 29.3
Dinv30514 Davidia involucrata HOM05D004642 ORTHO05D005466 1.6e-50 205.3 632 41.8
AUR62016441 Chenopodium quinoa HOM05D004642 ORTHO05D005466 8.0e-50 203.0 654 37.2
Lsat_1_v5_gn_4_103580 Lactuca sativa HOM05D004642 ORTHO05D005466 1.1e-49 202.6 735 40.7
CARHR091130 Cardamine hirsuta HOM05D004642 ORTHO05D005466 8.9e-49 199.5 511 34.6
CSS0030593 Camellia sinensis var. sinensis HOM05D004642 ORTHO05D005466 1.5e-48 198.7 572 41.4
Aa31LG8G3170 Aethionema arabicum HOM05D004642 ORTHO05D005466 4.4e-48 197.2 512 32.0
CsaV3_7G033140 Cucumis sativus L. HOM05D004642 ORTHO05D005466 9.8e-48 196.1 447 33.8
TWI75G1656 Tripterygium wilfordii HOM05D004642 ORTHO05D005466 1.7e-47 195.3 404 39.1
AUR62011627 Chenopodium quinoa HOM05D004642 ORTHO05D005466 6.4e-47 193.4 654 39.9
Duzib192G0922 Durio zibethinus HOM05D004642 ORTHO05D005466 6.4e-47 193.4 515 38.4
Manes.11G047800 Manihot esculenta HOM05D004642 ORTHO05D005466 8.3e-47 193.0 729 41.7
Eucgr.F03012 Eucalyptus grandis HOM05D004642 ORTHO05D005466 4.1e-46 190.7 379 43.8
PGSC0003DMG400002564 Solanum tuberosum HOM05D004642 ORTHO05D005466 9.2e-46 189.5 678 36.3
ClCG09G002170 Citrullus lanatus HOM05D004642 ORTHO05D005466 3.5e-45 187.6 512 31.8
TAR636G0382 Trochodendron aralioides HOM05D004642 ORTHO05D005466 6.0e-45 186.8 214 56.1
Sopen03g039110 Solanum pennellii HOM05D004642 ORTHO05D005466 2.3e-44 184.9 732 35.9
Glyma.11G187500 Glycine max HOM05D004642 ORTHO05D005466 3.0e-44 184.5 638 41.1
COL.COLO4_30362 Corchorus olitorius HOM05D004642 ORTHO05D005466 1.5e-43 182.2 554 36.8
Hma1.2p1_0323F.1_g125210 Hydrangea macrophylla HOM05D004642 ORTHO05D005466 5.6e-43 180.3 437 34.1
Sed0016916 Sechium edule HOM05D004642 ORTHO05D005466 5.6e-43 180.3 732 39.2
Solyc03g120230.3 Solanum lycopersicum HOM05D004642 ORTHO05D005466 9.5e-43 179.5 732 36.2
Glyma.12G087100 Glycine max HOM05D004642 ORTHO05D005466 2.8e-42 177.9 504 31.7
Thhalv10020153m.g Eutrema salsugineum HOM05D004642 ORTHO05D005466 3.6e-42 177.6 460 30.4
RcHm_v2.0_Chr2g0137781 Rosa chinensis HOM05D004642 ORTHO05D005466 2.0e-40 171.8 510 40.2
Atru.chr1.3266 Acer truncatum HOM05D004642 ORTHO05D005466 2.6e-40 171.4 512 31.4
SalBow2G0306 Salvia bowleyana HOM05D004642 ORTHO05D005466 3.4e-40 171.0 510 28.8
Ciclev10025273m.g Citrus clementina HOM05D004642 ORTHO05D005466 4.4e-40 170.6 566 41.2
Lalb_Chr04g0262651 Lupinus albus HOM05D004642 ORTHO05D005466 5.8e-40 170.2 515 28.9
Sed0016127 Sechium edule HOM05D004642 ORTHO05D005466 1.3e-39 169.1 386 32.6
Peaxi162Scf00015g00335 Petunia axillaris HOM05D004642 ORTHO05D005466 1.1e-38 166.0 670 42.4
CAN.G438.64 Capsicum annuum HOM05D004642 ORTHO05D005466 7.1e-38 163.3 452 42.3
Lj5A61G44 Lonicera japonica HOM05D004642 ORTHO05D005466 7.1e-38 163.3 678 37.8
BcaC09g48580 Brassica carinata HOM05D004642 ORTHO05D005466 1.2e-37 162.5 711 29.1
Lalb_Chr01g0012651 Lupinus albus HOM05D004642 ORTHO05D005466 1.2e-37 162.5 466 33.7
Psat7g189080 Pisum sativum HOM05D004642 ORTHO05D005466 1.2e-37 162.5 436 38.3
HPP92_020045 Vanilla planifolia HOM05D004642 ORTHO05D005466 1.2e-37 162.5 738 36.0
ECA248G0988 Erigeron canadensis HOM05D004642 ORTHO05D005466 2.7e-37 161.4 428 38.3
Hund00614 Selenicereus undatus HOM05D004642 ORTHO05D005466 2.7e-37 161.4 598 41.3
SGA_v2.0_scaffold4G01996 Striga asiatica HOM05D004642 ORTHO05D005466 1.0e-36 159.5 421 33.5
CDE07G1358 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 2.3e-36 158.3 628 33.6
Lj3g0008789 Lotus japonicus HOM05D004642 ORTHO05D005466 3.0e-36 157.9 431 33.6
Hund06610 Selenicereus undatus HOM05D004642 ORTHO05D005466 6.6e-36 156.8 713 38.6
Dinv38051 Davidia involucrata HOM05D004642 ORTHO05D005466 8.6e-36 156.4 335 33.7
Medtr4g054960 Medicago truncatula HOM05D004642 ORTHO05D005466 8.6e-36 156.4 438 35.6
TAR624G1258 Trochodendron aralioides HOM05D004642 ORTHO05D005466 1.1e-35 156.0 300 62.7
FAN14G2337 Fragaria x ananassa HOM05D004642 ORTHO05D005466 2.4e-33 148.3 732 41.1
Oeu033484.1 Olea europaea HOM05D004642 ORTHO05D005466 2.4e-33 148.3 473 29.8
FvH4_6g31081 Fragaria vesca HOM05D004642 ORTHO05D005466 4.0e-33 147.5 732 41.0
AT3G16000 Arabidopsis thaliana HOM05D004642 ORTHO05D005466 8.9e-33 146.4 506 39.5
Ah.01g021290 Amaranthus hybridus HOM05D004642 ORTHO05D005466 1.5e-32 145.6 721 33.8
ATR0037G055 Amborella trichopoda HOM05D004642 ORTHO05D005466 7.6e-32 143.3 695 38.8
AL3G28650 Arabidopsis lyrata HOM05D004642 ORTHO05D005466 3.8e-31 141.0 517 38.1
Ca_19383_v3 Cicer arietinum L. HOM05D004642 ORTHO05D005466 4.9e-31 140.6 508 34.1
FAN09G1651 Fragaria x ananassa HOM05D004642 ORTHO05D005466 4.9e-31 140.6 515 37.7
CANSAT56G1090 Cannabis sativa HOM05D004642 ORTHO05D005466 1.4e-30 139.0 452 41.2
Os01g0180300 Oryza sativa ssp. japonica HOM05D004642 ORTHO05D005466 2.4e-30 138.3 411 37.0
BcaB04g18872 Brassica carinata HOM05D004642 ORTHO05D005466 3.2e-30 137.9 441 32.7
CDE06G0246 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 3.2e-30 137.9 387 28.7
Phvul.011G092000 Phaseolus vulgaris HOM05D004642 ORTHO05D005466 3.2e-30 137.9 451 38.4
TPR.G15588 Trifolium pratense HOM05D004642 ORTHO05D005466 3.2e-30 137.9 616 42.4
SalBow2G2616 Salvia bowleyana HOM05D004642 ORTHO05D005466 4.2e-30 137.5 471 36.5
A03p39630 Brassica napus HOM05D004642 ORTHO05D005466 1.6e-29 135.6 449 28.5
BraA03t13110Z Brassica rapa HOM05D004642 ORTHO05D005466 2.1e-29 135.2 509 28.3
SEGI_16798 Sequoiadendron giganteum HOM05D004642 ORTHO05D005466 1.3e-28 132.5 685 33.3
Zm00001eb283760 Zea mays HOM05D004642 ORTHO05D005466 3.0e-28 131.3 658 31.0
Sc21g0005100 Simmondsia chinensis HOM05D004642 ORTHO05D005466 5.1e-28 130.6 736 40.4
BcaB06g25698 Brassica carinata HOM05D004642 ORTHO05D005466 8.7e-28 129.8 446 32.5
Glyma.11G237600 Glycine max HOM05D004642 ORTHO05D005466 5.6e-27 127.1 336 53.6
BcaC01g03843 Brassica carinata HOM05D004642 ORTHO05D005466 3.6e-26 124.4 444 30.2
C03p48030 Brassica napus HOM05D004642 ORTHO05D005466 3.6e-26 124.4 444 30.2
BolC3t17082H Brassica oleracea HOM05D004642 ORTHO05D005466 3.6e-26 124.4 444 30.2
Hma1.2p1_0323F.1_g125200 Hydrangea macrophylla HOM05D004642 ORTHO05D005466 1.1e-25 122.9 166 48.2
Os05g0180400 Oryza sativa ssp. japonica HOM05D004642 ORTHO05D005466 1.1e-25 122.9 697 40.9
HanXRQChr16g0500971 Helianthus annuus HOM05D004642 ORTHO05D005466 1.8e-25 122.1 719 38.1
FAN05G5776 Fragaria x ananassa HOM05D004642 ORTHO05D005466 4.0e-25 120.9 202 42.1
SGA_v2.0_scaffold37G14818 Striga asiatica HOM05D004642 ORTHO05D005466 4.0e-25 120.9 710 41.8
A05p33450 Brassica napus HOM05D004642 ORTHO05D005466 5.3e-25 120.6 508 30.5
arahy.Tifrunner.gnm1.ann1.D5EQ93 Arachis hypogaea HOM05D004642 ORTHO05D005466 9.0e-25 119.8 442 33.9
BcaB04g20887 Brassica carinata HOM05D004642 ORTHO05D005466 9.0e-25 119.8 702 29.1
Carub.0003s1573 Capsella rubella HOM05D004642 ORTHO05D005466 9.0e-25 119.8 515 37.5
arahy.Tifrunner.gnm1.ann1.I53961 Arachis hypogaea HOM05D004642 ORTHO05D005466 1.2e-24 119.4 501 33.1
FAN02G1410 Fragaria x ananassa HOM05D004642 ORTHO05D005466 1.2e-24 119.4 206 42.2
THA.LOC104817998 Tarenaya hassleriana HOM05D004642 ORTHO05D005466 1.2e-24 119.4 514 33.3
CDE07G0399 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 1.5e-24 119.0 628 24.4
VMungo1127G1134 Vigna mungo HOM05D004642 ORTHO05D005466 3.4e-24 117.9 507 27.2
arahy.Tifrunner.gnm1.ann1.CA04QB Arachis hypogaea HOM05D004642 ORTHO05D005466 7.6e-24 116.7 457 34.1
arahy.Tifrunner.gnm1.ann1.Z6VQ0W Arachis hypogaea HOM05D004642 ORTHO05D005466 7.6e-24 116.7 457 34.1
MD09G1213500 Malus domestica HOM05D004642 ORTHO05D005466 7.1e-22 110.2 333 29.1
Sp3g14350 Schrenkiella parvula HOM05D004642 ORTHO05D005466 1.2e-21 109.4 523 32.3
unitig_578.g16688 Utricularia gibba HOM05D004642 ORTHO05D005466 1.2e-21 109.4 719 25.6
HanXRQChr09g0275271 Helianthus annuus HOM05D004642 ORTHO05D005466 1.9e-19 102.1 480 32.5
MD09G1213300 Malus domestica HOM05D004642 ORTHO05D005466 1.3e-18 99.4 95 62.1
MSTRG.9454 Avicennia marina HOM05D004642 ORTHO05D005466 1.4e-17 95.9 506 36.4
C05p50450 Brassica napus HOM05D004642 ORTHO05D005466 4.0e-17 94.4 456 31.4
BolC5t33791H Brassica oleracea HOM05D004642 ORTHO05D005466 9.0e-17 93.2 507 29.8
Migut.D01034 Erythranthe guttata HOM05D004642 ORTHO05D005466 1.3e-15 89.4 704 26.1
BraA05t22169Z Brassica rapa HOM05D004642 ORTHO05D005466 4.9e-15 87.4 467 30.6
C01p48370 Brassica napus HOM05D004642 ORTHO05D005466 6.4e-15 87.0 504 25.4
AL776U10010 Arabidopsis lyrata HOM05D004642 ORTHO05D005466 1.6e-13 82.4 93 54.8
unitig_744.g24335 Utricularia gibba HOM05D004642 ORTHO05D005466 2.7e-13 81.6 685 26.6
HPP92_019980 Vanilla planifolia HOM05D004642 ORTHO05D005466 7.9e-13 80.1 404 27.0
Zm00001eb122200 Zea mays HOM05D004642 ORTHO05D005466 7.9e-13 80.1 298 24.8
Thhalv10023042m.g Eutrema salsugineum HOM05D004642 ORTHO05D005466 1.0e-12 79.7 239 28.0
MD09G1212900 Malus domestica HOM05D004642 ORTHO05D005466 1.3e-12 79.3 91 50.5
EL10Ac9g21996 Beta vulgaris HOM05D004642 ORTHO05D005466 1.9e-11 75.5 512 28.1
A03p54580 Brassica napus HOM05D004642 ORTHO05D005466 2.1e-10 72.0 70 61.4
BraA03t14525Z Brassica rapa HOM05D004642 ORTHO05D005466 2.1e-10 72.0 70 61.4
Cpa.g.sc1188.1 Carica papaya HOM05D004642 ORTHO05D005466 1.0e-07 63.2 86 44.2
A01p38100 Brassica napus HOM05D015723 ORTHO05D003275 6.5e-07 60.5 382 23.8
TAR636G1625 Trochodendron aralioides HOM05D004642 ORTHO05D005466 1.4e-06 59.3 58 50.0
TAR624G0442 Trochodendron aralioides HOM05D004642 ORTHO05D005466 9.3e-06 56.6 90 43.3


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