Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g11761 Nelumbo nucifera HOM05D008067 ORTHO05D010226 2.5e-37 158.3 80 100.0
Nn8g39208 Nelumbo nucifera HOM05D008067 ORTHO05D010226 2.2e-25 118.6 83 80.7
TAR624G0725 Trochodendron aralioides HOM05D008067 ORTHO05D010226 1.5e-18 95.9 80 62.5
Thecc.09G111500 Theobroma cacao HOM05D008067 ORTHO05D010226 7.7e-15 83.6 81 59.3
Cfa003263 Carpinus fangiana HOM05D008067 ORTHO05D010226 5.0e-14 80.9 81 55.6
COL.COLO4_34910 Corchorus olitorius HOM05D008067 ORTHO05D010226 1.1e-13 79.7 85 54.1
Haze_25708 Corylus avellana HOM05D008067 ORTHO05D010226 3.2e-13 78.2 81 54.3
QL02p085507 Quercus lobata HOM05D008067 ORTHO05D010226 7.2e-13 77.0 79 54.4
Aqoxy7G01692 Aquilegia oxysepala HOM05D008067 ORTHO05D010226 1.6e-12 75.9 91 54.9
Peaxi162Scf00560g00114 Petunia axillaris HOM05D008067 ORTHO05D010226 2.1e-12 75.5 84 52.4
Gohir.A07G006600 Gossypium hirsutum HOM05D008067 ORTHO05D010226 4.7e-12 74.3 84 58.3
Gohir.D07G005400 Gossypium hirsutum HOM05D008067 ORTHO05D010226 4.7e-12 74.3 84 58.3
Gorai.001G004900 Gossypium raimondii HOM05D008067 ORTHO05D010226 4.7e-12 74.3 84 58.3
Gorai.010G070100 Gossypium raimondii HOM05D008067 ORTHO05D010226 4.7e-12 74.3 82 57.3
CSS0009961 Camellia sinensis var. sinensis HOM05D008067 ORTHO05D010226 8.0e-12 73.6 65 58.5
CSS0037112 Camellia sinensis var. sinensis HOM05D008067 ORTHO05D010226 8.0e-12 73.6 65 58.5
MD02G1048100 Malus domestica HOM05D008067 ORTHO05D010226 8.0e-12 73.6 67 62.7
CiPaw.04G164800 Carya illinoinensis HOM05D008067 ORTHO05D010226 1.0e-11 73.2 81 49.4
ClCG11G002490 Citrullus lanatus HOM05D008067 ORTHO05D010226 8.8e-11 70.1 69 49.3
CsaV3_2G002290 Cucumis sativus L. HOM05D008067 ORTHO05D010226 2.0e-10 68.9 76 50.0
Gohir.D06G060201 Gossypium hirsutum HOM05D008067 ORTHO05D010226 2.6e-10 68.6 83 55.4
Prupe.7G230000 Prunus persica HOM05D008067 ORTHO05D010226 3.3e-10 68.2 79 57.0
MELO3C004555.2 Cucumis melo HOM05D008067 ORTHO05D010226 9.7e-10 66.6 68 48.5
Gohir.A06G061900 Gossypium hirsutum HOM05D008067 ORTHO05D010226 1.3e-09 66.2 82 52.4
Manes.03G019700 Manihot esculenta HOM05D008067 ORTHO05D010226 2.2e-09 65.5 83 53.0
Potri.018G079200 Populus trichocarpa HOM05D008067 ORTHO05D010226 2.2e-09 65.5 84 47.6
PGSC0003DMG400000315 Solanum tuberosum HOM05D008067 ORTHO05D010226 2.2e-09 65.5 86 48.8
Nitab4.5_0003537g0010 Nicotiana tabacum HOM05D008067 ORTHO05D010226 2.8e-09 65.1 85 49.4
Sed0012648 Sechium edule HOM05D008067 ORTHO05D010226 4.8e-09 64.3 68 47.1
Sopen12g003050 Solanum pennellii HOM05D008067 ORTHO05D010226 6.3e-09 63.9 90 45.6
FAN28G1234 Fragaria x ananassa HOM05D008067 ORTHO05D010226 8.2e-09 63.5 68 52.9
Sed0011788 Sechium edule HOM05D008067 ORTHO05D010226 8.2e-09 63.5 70 47.1
FvH4_1g04950 Fragaria vesca HOM05D008067 ORTHO05D010226 1.8e-08 62.4 67 53.7
Solyc12g007060.1 Solanum lycopersicum HOM05D008067 ORTHO05D010226 5.3e-08 60.8 98 41.8
FAN23G0784 Fragaria x ananassa HOM05D008067 ORTHO05D010226 9.1e-08 60.1 67 52.2
HPP92_010803 Vanilla planifolia HOM05D008067 ORTHO05D010226 9.1e-08 60.1 54 51.9
Lsat_1_v5_gn_8_95580 Lactuca sativa HOM05D008067 ORTHO05D010226 5.9e-07 57.4 64 54.7
SHI02746 Sapria himalayana HOM05D008067 ORTHO05D010226 5.9e-07 57.4 46 56.5
Sed0018150 Sechium edule HOM05D008067 ORTHO05D010226 5.9e-07 57.4 78 46.2
CsaV3_1G030530 Cucumis sativus L. HOM05D008067 ORTHO05D010226 7.7e-07 57.0 80 46.2
TPR.G35272 Trifolium pratense HOM05D003111 ORTHO05D003502 7.7e-07 57.0 54 57.4
TAR636G2707 Trochodendron aralioides HOM05D003111 ORTHO05D003502 1.3e-06 56.2 69 44.9
RcHm_v2.0_Chr2g0090561 Rosa chinensis HOM05D008067 ORTHO05D010226 2.2e-06 55.5 68 50.0
Ciclev10010044m.g Citrus clementina HOM05D008067 ORTHO05D010226 2.9e-06 55.1 81 45.7
Atru.chr7.1341 Acer truncatum HOM05D008067 ORTHO05D010226 5.0e-06 54.3 80 48.8
Medtr8g083450 Medicago truncatula HOM05D008067 ORTHO05D010226 6.5e-06 53.9 72 47.2


User provided reference genes

Program Settings