Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 3.0e-114 415.2 214 100.0
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 2.6e-70 269.2 211 73.9
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 9.1e-63 244.2 203 70.0
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 1.1e-60 237.3 206 67.0
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 2.1e-59 233.0 203 67.0
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 2.6e-57 226.1 201 64.7
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 2.2e-48 196.4 205 57.1
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 1.8e-47 193.4 204 58.3
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 7.7e-46 188.0 203 55.7
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 3.3e-44 182.6 206 58.7
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 2.8e-43 179.5 205 55.6
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 2.8e-43 179.5 202 56.4
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 2.3e-42 176.4 208 52.9
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 3.0e-42 176.0 203 54.2
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 6.8e-42 174.9 204 56.4
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 3.4e-41 172.6 205 54.1
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 5.7e-41 171.8 210 53.3
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 2.2e-40 169.9 208 53.8
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 6.4e-40 168.3 207 53.6
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 6.4e-40 168.3 207 53.6
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 1.4e-39 167.2 202 52.0
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 9.2e-39 164.5 207 55.1
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 5.9e-38 161.8 228 46.5
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 1.7e-37 160.2 205 54.1
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 2.5e-36 156.4 227 49.3
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 2.5e-36 156.4 210 52.9
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 3.3e-36 156.0 204 51.0
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 5.6e-36 155.2 216 48.1
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 1.2e-35 154.1 207 50.2
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.1e-35 153.3 202 53.0
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 2.8e-35 152.9 207 51.2
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 8.0e-35 151.4 164 54.3
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 2.3e-34 149.8 206 49.0
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 1.2e-33 147.5 215 48.8
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 1.5e-33 147.1 205 47.3
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 3.4e-33 146.0 211 46.0
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 5.8e-33 145.2 213 49.3
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 1.7e-32 143.7 209 51.2
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 1.7e-32 143.7 203 51.7
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 2.2e-32 143.3 217 51.6
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 4.9e-32 142.1 216 50.9
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.1e-31 141.0 217 51.2
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.9e-31 140.2 217 50.2
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.2e-30 137.5 205 49.3
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 1.6e-30 137.1 206 50.0
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 2.7e-30 136.3 211 47.9
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 3.5e-30 136.0 206 47.6
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 4.6e-30 135.6 226 48.7
MD15G1192000 Malus domestica HOM05D003644 ORTHO05D004305 6.0e-30 135.2 212 44.8
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 6.0e-30 135.2 217 47.5
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 2.3e-29 133.3 207 48.8
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 2.3e-29 133.3 209 48.8
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 3.9e-29 132.5 215 48.8
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 3.9e-29 132.5 206 48.1
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 8.6e-29 131.3 207 47.8
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 8.6e-29 131.3 210 45.2
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 1.5e-28 130.6 217 46.5
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 1.5e-28 130.6 203 47.3
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 2.5e-28 129.8 209 47.4
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 4.3e-28 129.0 215 46.0
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 7.3e-28 128.3 206 42.7
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 9.5e-28 127.9 210 47.6
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 1.2e-27 127.5 207 45.4
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 2.1e-27 126.7 225 47.1
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.1e-27 126.7 215 47.9
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 3.6e-27 125.9 213 44.1
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 3.6e-27 125.9 207 49.3
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 3.6e-27 125.9 207 44.9
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 4.7e-27 125.6 223 46.2
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 1.1e-26 124.4 206 47.6
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 1.4e-26 124.0 217 46.5
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 1.8e-26 123.6 207 43.0
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.3e-26 123.2 195 47.7
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 2.3e-26 123.2 207 43.5
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 3.1e-26 122.9 213 43.7
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 4.0e-26 122.5 213 43.7
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 5.2e-26 122.1 215 41.4
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 6.8e-26 121.7 214 43.0
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 8.9e-26 121.3 210 46.7
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 1.5e-25 120.6 204 44.1
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 3.4e-25 119.4 213 42.3
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 3.4e-25 119.4 213 39.9
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 3.4e-25 119.4 219 42.9
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 5.8e-25 118.6 212 44.3
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 1.3e-24 117.5 213 39.4
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 1.3e-24 117.5 213 39.4
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 2.2e-24 116.7 213 41.3
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 2.2e-24 116.7 213 41.3
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 2.2e-24 116.7 212 41.0
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 3.7e-24 115.9 213 42.7
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 6.4e-24 115.2 219 42.9
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 6.4e-24 115.2 213 40.8
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 6.4e-24 115.2 204 41.7
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 1.1e-23 114.4 178 47.2
Aqoxy7G01525 Aquilegia oxysepala HOM05D003644 ORTHO05D004305 2.4e-23 113.2 199 40.7
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 2.4e-23 113.2 217 40.6
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 4.1e-23 112.5 215 43.3
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 9.2e-23 111.3 213 40.8
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 2.1e-22 110.2 216 41.7
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 1.0e-21 107.8 206 42.7
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 3.0e-21 106.3 212 38.7
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 3.0e-21 106.3 212 38.7
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 3.0e-21 106.3 213 43.7
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 3.9e-21 105.9 212 38.2
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 5.1e-21 105.5 212 38.7
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 8.6e-21 104.8 212 38.7
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 8.6e-21 104.8 129 55.8
RcHm_v2.0_Chr2g0091291 Rosa chinensis HOM05D003644 ORTHO05D004305 1.5e-20 104.0 169 47.9
C07p56470 Brassica napus HOM05D003644 ORTHO05D004305 1.9e-20 103.6 212 38.2
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 1.9e-20 103.6 212 37.7
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 3.3e-20 102.8 201 39.3
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 4.3e-20 102.4 212 37.7
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 5.6e-20 102.1 179 41.3
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 5.6e-20 102.1 201 39.3
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 9.5e-20 101.3 214 39.3
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 1.2e-19 100.9 204 40.7
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 1.6e-19 100.5 205 40.0
BcaNung04091 Brassica carinata HOM05D003644 ORTHO05D004305 4.7e-19 99.0 212 36.8
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 6.2e-19 98.6 201 38.8
Lalb_Chr16g0388081 Lupinus albus HOM05D003644 ORTHO05D004305 1.1e-18 97.8 113 56.6
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 1.8e-18 97.1 139 50.4
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 2.3e-18 96.7 201 40.8
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 3.1e-18 96.3 161 44.7
Lalb_Chr22g0352641 Lupinus albus HOM05D003644 ORTHO05D004305 3.1e-18 96.3 217 38.2
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 4.0e-18 95.9 208 38.0
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 5.2e-18 95.5 207 37.2
Nitab4.5_0014820g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 1.2e-17 94.4 145 44.1
Aa31LG8G17030 Aethionema arabicum HOM05D003644 ORTHO05D004305 2.0e-17 93.6 167 41.3
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 2.6e-17 93.2 212 39.6
C09p15050 Brassica napus HOM05D003644 ORTHO05D004305 4.4e-17 92.4 170 39.4
Hund26238 Selenicereus undatus HOM05D003644 ORTHO05D004305 4.4e-17 92.4 203 41.4
BolC7t40541H Brassica oleracea HOM05D003644 ORTHO05D004305 7.6e-17 91.7 220 36.8
BcaB08g34898 Brassica carinata HOM05D003644 ORTHO05D004305 9.9e-17 91.3 193 36.3
Actinidia32668 Actinidia chinensis HOM05D003644 ORTHO05D004305 2.2e-16 90.1 156 46.2
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 2.2e-16 90.1 196 40.8
BcaC07g41225 Brassica carinata HOM05D003644 ORTHO05D004305 8.4e-16 88.2 193 36.8
COL.COLO4_17464 Corchorus olitorius HOM05D003644 ORTHO05D004305 1.1e-15 87.8 196 36.2
Solyc12g007240.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 1.1e-15 87.8 153 41.8
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 2.4e-15 86.7 218 40.4
arahy.Tifrunner.gnm1.ann1.R9ZCFD Arachis hypogaea HOM05D003644 ORTHO05D004305 3.2e-15 86.3 181 40.3
A09p12690 Brassica napus HOM05D003644 ORTHO05D004305 5.4e-15 85.5 200 36.0
Carub.0003s3436 Capsella rubella HOM05D003644 ORTHO05D004305 5.4e-15 85.5 191 37.2
Nitab4.5_0002431g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 2.1e-14 83.6 93 52.7
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 2.7e-14 83.2 208 35.6
C07p01040 Brassica napus HOM05D003644 ORTHO05D004305 6.0e-14 82.0 211 37.0
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 7.8e-14 81.6 211 37.0
EL10Ac8g18428 Beta vulgaris HOM05D003644 ORTHO05D004305 1.3e-13 80.9 209 39.2
BcaB03g16807 Brassica carinata HOM05D003644 ORTHO05D004305 1.3e-13 80.9 208 35.6
BcaC04g22808 Brassica carinata HOM05D003644 ORTHO05D004305 1.3e-13 80.9 190 36.3
BolC9t54408H Brassica oleracea HOM05D003644 ORTHO05D004305 1.3e-13 80.9 190 36.3
TPR.G23503 Trifolium pratense HOM05D003644 ORTHO05D004305 1.7e-13 80.5 177 39.0
PGR102G0050 Punica granatum HOM05D003644 ORTHO05D004305 3.9e-13 79.3 180 39.4
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 5.1e-13 79.0 212 33.5
Lalb_Chr05g0223051 Lupinus albus HOM05D003644 ORTHO05D004305 8.6e-13 78.2 182 35.7
BcaC06g36690 Brassica carinata HOM05D003644 ORTHO05D004305 2.5e-12 76.6 116 44.0
HPP92_024624 Vanilla planifolia HOM05D003644 ORTHO05D004305 3.3e-12 76.3 203 37.4
A07p00580 Brassica napus HOM05D003644 ORTHO05D004305 5.6e-12 75.5 215 34.4
Zm00001eb156860 Zea mays HOM05D003644 ORTHO05D004305 1.6e-11 73.9 213 35.7
Nitab4.5_0001004g0030 Nicotiana tabacum HOM05D003644 ORTHO05D004305 3.6e-11 72.8 134 40.3
Zm00001eb360290 Zea mays HOM05D003644 ORTHO05D004305 3.6e-11 72.8 215 36.7
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 6.2e-11 72.0 211 34.6
Solyc07g018370.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 8.1e-11 71.6 124 41.9
Rhsim05G0043500 Rhododendron simsii HOM05D003644 ORTHO05D004305 1.1e-10 71.2 213 33.8
Migut.K00491 Erythranthe guttata HOM05D003644 ORTHO05D004305 1.8e-10 70.5 178 34.8
Lsat_1_v5_gn_5_147641 Lactuca sativa HOM05D003644 ORTHO05D004305 2.4e-10 70.1 128 41.4
HPP92_019983 Vanilla planifolia HOM05D003644 ORTHO05D004305 4.0e-10 69.3 202 36.6
BraA07t27854Z Brassica rapa HOM05D003644 ORTHO05D004305 1.5e-09 67.4 120 41.7
Os01g0676900 Oryza sativa ssp. japonica HOM05D003644 ORTHO05D004305 1.5e-09 67.4 208 35.1
Os05g0559316 Oryza sativa ssp. japonica HOM05D003644 ORTHO05D004305 3.4e-09 66.2 104 47.1
Ah.09g230900 Amaranthus hybridus HOM05D003644 ORTHO05D004305 5.8e-09 65.5 221 32.6
Oeu018442.1 Olea europaea HOM05D003644 ORTHO05D004305 7.6e-09 65.1 101 49.5
unitig_578.g15927 Utricularia gibba HOM05D003644 ORTHO05D004305 9.9e-09 64.7 82 47.6
Eucgr.C01280 Eucalyptus grandis HOM05D003644 ORTHO05D004305 1.7e-08 63.9 210 33.3
BraA09t36915Z Brassica rapa HOM05D003644 ORTHO05D004305 2.2e-08 63.5 79 45.6
Sc08g0007700 Simmondsia chinensis HOM05D003644 ORTHO05D004305 3.2e-07 59.7 168 33.9
CARHR236630 Cardamine hirsuta HOM05D003644 ORTHO05D004305 3.5e-06 56.2 85 40.0
BcaB03g16801 Brassica carinata HOM05D003644 ORTHO05D004305 4.6e-06 55.8 49 57.1
Psat7g014640 Pisum sativum HOM05D003644 ORTHO05D004305 7.8e-06 55.1 174 35.1


User provided reference genes

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