Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g11609 Nelumbo nucifera HOM05D008072 ORTHO05D010204 1.6e-70 269.2 133 100.0
Nn8g39117 Nelumbo nucifera HOM05D008072 ORTHO05D010204 5.0e-35 151.4 106 68.9
TAR626G1017 Trochodendron aralioides HOM05D008072 ORTHO05D010204 9.1e-29 130.6 106 61.3
Dinv37992 Davidia involucrata HOM05D008072 ORTHO05D010204 2.1e-25 119.4 110 56.4
Aqoxy7G01464 Aquilegia oxysepala HOM05D008072 ORTHO05D010204 2.7e-25 119.0 111 56.8
Potri.001G188400 Populus trichocarpa HOM05D008072 ORTHO05D010204 7.0e-21 104.4 112 51.8
Hma1.2p1_3269F.1_g334750 Hydrangea macrophylla HOM05D008072 ORTHO05D010204 3.5e-20 102.1 107 50.5
Rhsim12G0202400 Rhododendron simsii HOM05D008072 ORTHO05D010204 7.7e-20 100.9 109 49.5
Oeu060494.1 Olea europaea HOM05D008072 ORTHO05D010204 5.0e-19 98.2 108 43.5
Sabra01G0152600 Salix brachista HOM05D008072 ORTHO05D010204 8.6e-19 97.4 116 50.9
GSVIVG01017012001 Vitis vinifera HOM05D008072 ORTHO05D010204 8.6e-19 97.4 112 50.9
MD17G1186400 Malus domestica HOM05D008072 ORTHO05D010204 1.2e-17 93.6 115 47.8
Actinidia09003 Actinidia chinensis HOM05D008072 ORTHO05D010204 2.1e-17 92.8 113 48.7
Prupe.3G061100 Prunus persica HOM05D008072 ORTHO05D010204 1.4e-16 90.1 112 48.2
FAN02G2294 Fragaria x ananassa HOM05D008072 ORTHO05D010204 8.9e-16 87.4 114 44.7
Cc04_g02690 Coffea canephora HOM05D008072 ORTHO05D010204 1.2e-15 87.0 111 39.6
Peaxi162Scf00038g00843 Petunia axillaris HOM05D008072 ORTHO05D010204 2.6e-15 85.9 114 43.9
RcHm_v2.0_Chr2g0140071 Rosa chinensis HOM05D008072 ORTHO05D010204 7.5e-15 84.3 114 44.7
HanXRQChr16g0501221 Helianthus annuus HOM05D008072 ORTHO05D010204 9.8e-15 84.0 118 39.0
FvH4_6g32180 Fragaria vesca HOM05D008072 ORTHO05D010204 1.3e-14 83.6 114 43.9
QL05p020523 Quercus lobata HOM05D008072 ORTHO05D010204 1.7e-14 83.2 105 42.9
PGSC0003DMG400002533 Solanum tuberosum HOM05D008072 ORTHO05D010204 1.7e-14 83.2 114 43.0
FAN09G3706 Fragaria x ananassa HOM05D008072 ORTHO05D010204 2.2e-14 82.8 114 43.0
FAN14G4057 Fragaria x ananassa HOM05D008072 ORTHO05D010204 2.2e-14 82.8 115 42.6
MBI01_g42894_MAGBIO Magnolia biondii HOM05D008072 ORTHO05D010204 2.2e-14 82.8 106 44.3
Manes.04G132700 Manihot esculenta HOM05D008072 ORTHO05D010204 3.7e-14 82.0 119 40.3
FAN05G4246 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.1e-13 80.5 114 43.0
PGR102G0255 Punica granatum HOM05D008072 ORTHO05D010204 1.1e-13 80.5 118 38.1
Thecc.06G097600 Theobroma cacao HOM05D008072 ORTHO05D010204 1.8e-13 79.7 112 42.0
TWI18G1284 Tripterygium wilfordii HOM05D008072 ORTHO05D010204 4.1e-13 78.6 114 41.2
MBI04_g06582_MAGBIO Magnolia biondii HOM05D008072 ORTHO05D010204 5.4e-13 78.2 85 47.1
Sc10g0007210 Simmondsia chinensis HOM05D008072 ORTHO05D010204 1.6e-12 76.6 114 43.0
MSTRG.9481 Avicennia marina HOM05D008072 ORTHO05D010204 2.0e-12 76.3 119 37.0
Haze_15831 Corylus avellana HOM05D008072 ORTHO05D010204 2.0e-12 76.3 159 33.3
Sopen03g039710 Solanum pennellii HOM05D008072 ORTHO05D010204 2.7e-12 75.9 110 40.0
CSS0040470 Camellia sinensis var. sinensis HOM05D008072 ORTHO05D010204 3.5e-12 75.5 114 43.9
ECA232G1650 Erigeron canadensis HOM05D004877 ORTHO05D005942 5.9e-12 74.7 69 53.6
Lsat_1_v5_gn_4_99940 Lactuca sativa HOM05D008072 ORTHO05D010204 7.8e-12 74.3 95 38.9
Gorai.003G063000 Gossypium raimondii HOM05D008072 ORTHO05D010204 1.0e-11 73.9 97 45.4
Atru.chr1.3499 Acer truncatum HOM05D008072 ORTHO05D010204 1.3e-11 73.6 121 40.5
Gohir.A02G118500 Gossypium hirsutum HOM05D008072 ORTHO05D010204 1.7e-11 73.2 97 45.4
Gohir.D03G059100 Gossypium hirsutum HOM05D008072 ORTHO05D010204 1.7e-11 73.2 97 45.4
SalBow7G3462 Salvia bowleyana HOM05D008072 ORTHO05D010204 2.3e-11 72.8 115 40.0
Solyc03g120880.4 Solanum lycopersicum HOM05D004877 ORTHO05D005942 2.9e-11 72.4 107 41.1
EL10Ac9g22100 Beta vulgaris HOM05D008072 ORTHO05D010204 6.6e-11 71.2 116 43.1
Cpa.g.c31416 Carica papaya HOM05D008072 ORTHO05D010204 1.5e-10 70.1 110 37.3
SEGI_35585 Sequoiadendron giganteum HOM05D008072 ORTHO05D010204 1.9e-10 69.7 61 54.1
Nitab4.5_0001755g0100 Nicotiana tabacum HOM05D008072 ORTHO05D010204 3.3e-10 68.9 74 48.6
Ciclev10026797m.g Citrus clementina HOM05D008072 ORTHO05D010204 9.5e-10 67.4 111 39.6
Duzib192G0771 Durio zibethinus HOM05D008072 ORTHO05D010204 9.5e-10 67.4 122 39.3
MBI17_g05503_MAGBIO Magnolia biondii HOM05D008072 ORTHO05D010204 2.1e-09 66.2 65 47.7
CsaV3_7G035400 Cucumis sativus L. HOM05D008072 ORTHO05D010204 3.6e-09 65.5 109 37.6
CANSAT56G4142 Cannabis sativa HOM05D008072 ORTHO05D010204 4.7e-09 65.1 115 36.5
VMungo0331G2041 Vigna mungo HOM05D008072 ORTHO05D010204 4.7e-09 65.1 120 36.7
Sed0011388 Sechium edule HOM05D008072 ORTHO05D010204 8.0e-09 64.3 109 33.9
Lj3g0001751 Lotus japonicus HOM05D008072 ORTHO05D010204 1.4e-08 63.5 111 37.8
MBI13_g44446_MAGBIO Magnolia biondii HOM05D008072 ORTHO05D010204 1.8e-08 63.2 66 48.5
Glyma.07G016900 Glycine max HOM05D008072 ORTHO05D010204 2.3e-08 62.8 108 38.0
Phvul.010G146400 Phaseolus vulgaris HOM05D008072 ORTHO05D010204 4.0e-08 62.0 115 37.4
TPR.G35014 Trifolium pratense HOM05D008072 ORTHO05D010204 5.2e-08 61.6 110 36.4
CiPaw.02G146800 Carya illinoinensis HOM05D008072 ORTHO05D010204 6.8e-08 61.2 104 41.3
MD09G1205700 Malus domestica HOM05D008072 ORTHO05D010204 8.9e-08 60.8 112 37.5
Cfa003662 Carpinus fangiana HOM05D008072 ORTHO05D010204 1.2e-07 60.5 116 38.8
MELO3C024449.2 Cucumis melo HOM05D008072 ORTHO05D010204 1.2e-07 60.5 109 34.9
Hund06655 Selenicereus undatus HOM05D008072 ORTHO05D010204 4.4e-07 58.5 102 40.2
Glyma.08G202200 Glycine max HOM05D008072 ORTHO05D010204 7.5e-07 57.8 110 34.5
Hund31378 Selenicereus undatus HOM05D008072 ORTHO05D010204 7.5e-07 57.8 102 40.2
Lalb_Chr04g0262911 Lupinus albus HOM05D008072 ORTHO05D010204 1.7e-06 56.6 103 35.9
Medtr8g013930 Medicago truncatula HOM05D008072 ORTHO05D010204 1.7e-06 56.6 111 35.1
Psat4g197480 Pisum sativum HOM05D008072 ORTHO05D010204 6.4e-06 54.7 111 35.1
ClCG09G000070 Citrullus lanatus HOM05D008072 ORTHO05D010204 8.3e-06 54.3 109 30.3


User provided reference genes

Program Settings