Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g11497 Nelumbo nucifera HOM05D003907 ORTHO05D004819 5.7e-281 970.3 510 100.0
GSVIVG01033959001 Vitis vinifera HOM05D003907 ORTHO05D004819 6.6e-261 903.7 510 90.4
TAR636G2600 Trochodendron aralioides HOM05D003907 ORTHO05D004819 1.1e-260 902.9 510 90.8
Manes.09G104800 Manihot esculenta HOM05D003907 ORTHO05D004819 2.1e-259 898.7 510 90.2
Gohir.D09G160800 Gossypium hirsutum HOM05D003907 ORTHO05D004819 6.2e-259 897.1 511 90.4
Dinv23105 Davidia involucrata HOM05D003907 ORTHO05D004819 8.1e-259 896.7 510 90.0
TWI53G0466 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 8.1e-259 896.7 510 90.6
TAR633G0126 Trochodendron aralioides HOM05D003907 ORTHO05D004819 8.1e-259 896.7 510 90.4
Cfa017208 Carpinus fangiana HOM05D003907 ORTHO05D004819 1.4e-258 896.0 510 90.6
Manes.09G105700 Manihot esculenta HOM05D003907 ORTHO05D004819 1.4e-258 896.0 510 89.8
Gorai.006G182500 Gossypium raimondii HOM05D003907 ORTHO05D004819 1.8e-258 895.6 511 90.2
Potri.006G100200 Populus trichocarpa HOM05D003907 ORTHO05D004819 3.1e-258 894.8 510 89.6
Actinidia05367 Actinidia chinensis HOM05D003907 ORTHO05D004819 6.8e-258 893.6 512 90.4
Gohir.A09G165200 Gossypium hirsutum HOM05D003907 ORTHO05D004819 6.8e-258 893.6 511 90.0
CSS0040367 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 2.0e-257 892.1 511 90.4
TWI74G1106 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 2.6e-257 891.7 510 90.4
Glyma.18G200800 Glycine max HOM05D003907 ORTHO05D004819 4.4e-257 891.0 510 89.2
ClCG04G006990 Citrullus lanatus HOM05D003907 ORTHO05D004819 5.8e-257 890.6 510 89.6
Cc06_g01360 Coffea canephora HOM05D003907 ORTHO05D004819 5.8e-257 890.6 510 89.2
Duzib106G0096 Durio zibethinus HOM05D003907 ORTHO05D004819 5.8e-257 890.6 511 89.6
Lsat_1_v5_gn_9_34621 Lactuca sativa HOM05D003907 ORTHO05D004819 5.8e-257 890.6 510 89.4
Glyma.07G149900 Glycine max HOM05D003907 ORTHO05D004819 7.5e-257 890.2 510 89.2
Potri.016G116200 Populus trichocarpa HOM05D003907 ORTHO05D004819 1.3e-256 889.4 510 89.0
Sabra16G0111700 Salix brachista HOM05D003907 ORTHO05D004819 1.7e-256 889.0 510 89.0
Aqoxy4G02574 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 2.2e-256 888.6 511 88.6
MSTRG.10218 Avicennia marina HOM05D003907 ORTHO05D004819 2.2e-256 888.6 510 89.0
CsaV3_4G026280 Cucumis sativus L. HOM05D003907 ORTHO05D004819 3.7e-256 887.9 510 89.4
CiPaw.09G209200 Carya illinoinensis HOM05D003907 ORTHO05D004819 4.9e-256 887.5 510 89.6
MSTRG.26811 Avicennia marina HOM05D003907 ORTHO05D004819 8.3e-256 886.7 510 89.2
Ciclev10011517m.g Citrus clementina HOM05D003907 ORTHO05D004819 8.3e-256 886.7 511 88.8
Thecc.05G016000 Theobroma cacao HOM05D003907 ORTHO05D004819 3.2e-255 884.8 511 89.2
Oeu041306.1 Olea europaea HOM05D003907 ORTHO05D004819 7.1e-255 883.6 510 88.8
Lj2A75G35 Lonicera japonica HOM05D003907 ORTHO05D004819 9.2e-255 883.2 510 89.6
Psat3g128200 Pisum sativum HOM05D003907 ORTHO05D004819 1.2e-254 882.9 510 87.8
HanXRQChr10g0299881 Helianthus annuus HOM05D003907 ORTHO05D004819 1.6e-254 882.5 510 89.0
QL07p019755 Quercus lobata HOM05D003907 ORTHO05D004819 6.0e-254 880.6 509 87.8
SGA_v2.0_scaffold110G31215 Striga asiatica HOM05D003907 ORTHO05D004819 7.8e-254 880.2 510 87.6
Prupe.6G277300 Prunus persica HOM05D003907 ORTHO05D004819 1.3e-253 879.4 510 88.0
Sopen09g001280 Solanum pennellii HOM05D003907 ORTHO05D004819 1.7e-253 879.0 510 87.8
Solyc09g005310.3 Solanum lycopersicum HOM05D003907 ORTHO05D004819 2.3e-253 878.6 510 87.6
CSS0038026 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 3.0e-253 878.2 510 87.8
CAN.G5.12 Capsicum annuum HOM05D003907 ORTHO05D004819 5.1e-253 877.5 510 87.5
CANSAT35G0110 Cannabis sativa HOM05D003907 ORTHO05D004819 8.6e-253 876.7 510 88.6
Aqoxy2G00900 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 1.1e-252 876.3 511 88.3
Medtr7g068440 Medicago truncatula HOM05D003907 ORTHO05D004819 1.9e-252 875.5 510 87.3
Sed0026155 Sechium edule HOM05D003907 ORTHO05D004819 1.9e-252 875.5 510 88.0
THA.LOC104823300 Tarenaya hassleriana HOM05D003907 ORTHO05D004819 2.5e-252 875.2 510 87.5
PGSC0003DMG400023084 Solanum tuberosum HOM05D003907 ORTHO05D004819 3.3e-252 874.8 510 87.3
Migut.L02013 Erythranthe guttata HOM05D003907 ORTHO05D004819 4.3e-252 874.4 510 87.6
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea HOM05D003907 ORTHO05D004819 2.1e-251 872.1 510 87.8
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea HOM05D003907 ORTHO05D004819 2.1e-251 872.1 510 87.8
Haze_21003 Corylus avellana HOM05D003907 ORTHO05D004819 3.6e-251 871.3 527 86.5
Nitab4.5_0000511g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 3.6e-251 871.3 510 87.6
Thhalv10013023m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 4.7e-251 870.9 510 86.5
Nitab4.5_0000335g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 4.7e-251 870.9 510 87.6
Sed0027660 Sechium edule HOM05D003907 ORTHO05D004819 8.1e-251 870.2 510 87.1
Atru.chr8.2242 Acer truncatum HOM05D003907 ORTHO05D004819 1.1e-250 869.8 511 87.1
TPR.G13353 Trifolium pratense HOM05D003907 ORTHO05D004819 1.4e-250 869.4 511 87.3
Carub.0006s0037 Capsella rubella HOM05D003907 ORTHO05D004819 1.8e-250 869.0 510 85.7
AL6G10610 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 3.1e-250 868.2 510 85.9
AT5G01460 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 4.0e-250 867.8 510 85.9
AL3G19930 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 5.2e-250 867.5 510 86.1
CARHR211830 Cardamine hirsuta HOM05D003907 ORTHO05D004819 4.4e-249 864.4 510 85.1
SalBow5G2920 Salvia bowleyana HOM05D003907 ORTHO05D004819 7.6e-249 863.6 510 85.9
Sp6g40750 Schrenkiella parvula HOM05D003907 ORTHO05D004819 9.9e-249 863.2 510 85.7
AT3G08930 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 1.3e-248 862.8 510 85.7
Carub.0003s0804 Capsella rubella HOM05D003907 ORTHO05D004819 1.3e-248 862.8 510 85.9
Glyma.03G058100 Glycine max HOM05D003907 ORTHO05D004819 1.3e-248 862.8 510 87.1
Sp3g07320 Schrenkiella parvula HOM05D003907 ORTHO05D004819 2.2e-248 862.1 510 85.7
Thhalv10020541m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 4.9e-248 860.9 510 85.3
CiPaw.10G156600 Carya illinoinensis HOM05D003907 ORTHO05D004819 6.4e-248 860.5 510 86.7
Ca_20232_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 1.9e-247 859.0 510 86.1
Glyma.01G122100 Glycine max HOM05D003907 ORTHO05D004819 2.4e-247 858.6 510 86.5
Migut.J00170 Erythranthe guttata HOM05D003907 ORTHO05D004819 3.2e-247 858.2 510 85.5
PSO801G0155 Papaver somniferum HOM05D003907 ORTHO05D004819 9.2e-247 856.7 511 86.3
ATR0618G011 Amborella trichopoda HOM05D003907 ORTHO05D004819 1.2e-246 856.3 511 86.3
PSO339G6136 Papaver somniferum HOM05D003907 ORTHO05D004819 1.2e-246 856.3 511 86.3
vmacro11169 Vaccinium macrocarpon HOM05D003907 ORTHO05D004819 1.2e-246 856.3 549 81.4
CARHR083260 Cardamine hirsuta HOM05D003907 ORTHO05D004819 2.1e-246 855.5 510 85.1
MD12G1166000 Malus domestica HOM05D003907 ORTHO05D004819 2.7e-246 855.1 510 85.9
MD04G1152700 Malus domestica HOM05D003907 ORTHO05D004819 3.5e-246 854.7 510 85.7
DCAR_018702 Daucus carota HOM05D003907 ORTHO05D004819 4.6e-246 854.4 511 85.9
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 4.6e-246 854.4 502 87.6
C05p58960 Brassica napus HOM05D003907 ORTHO05D004819 6.0e-246 854.0 510 85.3
BolC5t34549H Brassica oleracea HOM05D003907 ORTHO05D004819 7.8e-246 853.6 510 85.1
BraSC256t45932Z Brassica rapa HOM05D003907 ORTHO05D004819 7.8e-246 853.6 510 85.3
PGR004G0735 Punica granatum HOM05D003907 ORTHO05D004819 1.3e-245 852.8 510 86.7
Lj3g0019592 Lotus japonicus HOM05D003907 ORTHO05D004819 3.9e-245 851.3 510 85.5
BcaB04g18559 Brassica carinata HOM05D003907 ORTHO05D004819 6.6e-245 850.5 510 84.3
Phvul.008G104400 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 1.1e-244 849.7 510 84.9
Lalb_Chr01g0023081 Lupinus albus HOM05D003907 ORTHO05D004819 4.3e-244 847.8 512 85.9
Hund14296 Selenicereus undatus HOM05D003907 ORTHO05D004819 4.3e-244 847.8 511 84.7
Ah.12g058610 Amaranthus hybridus HOM05D003907 ORTHO05D004819 9.6e-244 846.7 510 84.5
RcHm_v2.0_Chr3g0463141 Rosa chinensis HOM05D003907 ORTHO05D004819 9.6e-244 846.7 510 84.9
unitig_8.g3229 Utricularia gibba HOM05D003907 ORTHO05D004819 2.1e-243 845.5 510 84.3
Lj3A953T53 Lonicera japonica HOM05D003907 ORTHO05D004819 2.8e-243 845.1 524 84.2
Lalb_Chr03g0043281 Lupinus albus HOM05D003907 ORTHO05D004819 3.6e-243 844.7 512 85.4
EL10Ac5g12561 Beta vulgaris HOM05D003907 ORTHO05D004819 6.2e-243 844.0 510 83.3
FAN09G4250 Fragaria x ananassa HOM05D003907 ORTHO05D004819 3.1e-242 841.6 510 84.5
ECA247G1720 Erigeron canadensis HOM05D003907 ORTHO05D004819 5.2e-242 840.9 492 87.0
Rhsim03G0144200 Rhododendron simsii HOM05D003907 ORTHO05D004819 4.4e-241 837.8 505 86.3
FAN02G2014 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.3e-240 836.3 510 83.9
FvH4_6g11450 Fragaria vesca HOM05D003907 ORTHO05D004819 2.2e-240 835.5 510 83.7
FAN14G1433 Fragaria x ananassa HOM05D003907 ORTHO05D004819 2.2e-240 835.5 510 83.7
FAN14G5854 Fragaria x ananassa HOM05D003907 ORTHO05D004819 2.2e-240 835.5 510 83.7
Eucgr.B02811 Eucalyptus grandis HOM05D003907 ORTHO05D004819 2.9e-240 835.1 494 87.4
Aa31LG1G23090 Aethionema arabicum HOM05D003907 ORTHO05D004819 9.3e-239 830.1 494 85.4
AUR62010458 Chenopodium quinoa HOM05D003907 ORTHO05D004819 1.2e-238 829.7 511 82.6
Sabra06G0077000 Salix brachista HOM05D003907 ORTHO05D004819 1.0e-237 826.6 556 79.0
A05p39920 Brassica napus HOM05D003907 ORTHO05D004819 3.0e-237 825.1 494 85.4
BolC3t16659H Brassica oleracea HOM05D003907 ORTHO05D004819 3.9e-237 824.7 510 82.5
A03p36270 Brassica napus HOM05D003907 ORTHO05D004819 5.1e-237 824.3 510 82.5
C03p43910 Brassica napus HOM05D003907 ORTHO05D004819 5.1e-237 824.3 510 82.5
BraA03t12798Z Brassica rapa HOM05D003907 ORTHO05D004819 1.5e-236 822.8 510 82.4
Zm00001eb269470 Zea mays HOM05D003907 ORTHO05D004819 1.5e-236 822.8 511 82.4
VMungo0331G1185 Vigna mungo HOM05D003907 ORTHO05D004819 7.3e-236 820.5 494 86.6
COL.COLO4_14536 Corchorus olitorius HOM05D003907 ORTHO05D004819 8.1e-235 817.0 472 89.2
CDE05G1648 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 3.4e-233 811.6 511 80.8
Oeu064499.2 Olea europaea HOM05D003907 ORTHO05D004819 7.6e-233 810.4 547 78.4
FAN05G4390 Fragaria x ananassa HOM05D003907 ORTHO05D004819 2.4e-231 805.4 494 83.6
Zm00001eb378570 Zea mays HOM05D003907 ORTHO05D004819 1.6e-230 802.7 511 81.0
CDE05G1838 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 3.9e-229 798.1 511 79.5
Lalb_Chr19g0124541 Lupinus albus HOM05D003907 ORTHO05D004819 7.4e-228 793.9 512 81.1
Ca_07641_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 1.1e-226 790.0 524 79.8
Ca_30080_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 1.1e-226 790.0 524 79.8
Phvul.010G001200 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 2.9e-224 781.9 510 80.4
AUR62030453 Chenopodium quinoa HOM05D003907 ORTHO05D004819 3.8e-224 781.6 512 79.1
Peaxi162Scf00141g01026 Petunia axillaris HOM05D003907 ORTHO05D004819 1.0e-221 773.5 510 79.2
BcaC05g29627 Brassica carinata HOM05D003907 ORTHO05D004819 2.7e-214 748.8 440 86.4
Duzib128G0387 Durio zibethinus HOM05D003907 ORTHO05D004819 1.9e-207 726.1 511 75.9
MELO3C003291.2 Cucumis melo HOM05D003907 ORTHO05D004819 5.5e-207 724.5 472 82.2
Duzib093G1828 Durio zibethinus HOM05D003907 ORTHO05D004819 3.1e-202 708.8 503 75.0
Lj3g0026649 Lotus japonicus HOM05D003907 ORTHO05D004819 2.0e-201 706.1 413 87.7
Actinidia20733 Actinidia chinensis HOM05D003907 ORTHO05D004819 4.2e-199 698.4 510 73.7
Mapoly0058s0053 Marchantia polymorpha HOM05D003907 ORTHO05D004819 5.9e-193 677.9 516 66.3
SMO367G0485 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.8e-186 656.4 503 67.8
Cpa.g.sc11.141 Carica papaya HOM05D003907 ORTHO05D004819 1.0e-181 640.6 375 86.7
unitig_22.g6592 Utricularia gibba HOM05D003907 ORTHO05D004819 2.0e-180 636.3 468 72.0
Pp3c13_15020 Physcomitrium patens HOM05D003907 ORTHO05D004819 4.1e-178 628.6 516 62.4
Sc01g0006450 Simmondsia chinensis HOM05D003907 ORTHO05D004819 5.2e-173 611.7 365 86.3
CBR_g40208 Chara braunii HOM05D003907 ORTHO05D004819 6.8e-173 611.3 522 61.9
TPR.G7076 Trifolium pratense HOM05D003907 ORTHO05D004819 2.2e-171 606.3 364 85.4
HPP92_003698 Vanilla planifolia HOM05D003907 ORTHO05D004819 2.8e-171 605.9 379 81.3
CBR_g53729 Chara braunii HOM05D003907 ORTHO05D004819 7.7e-169 597.8 511 60.3
SMO146G0061 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 5.2e-165 585.1 496 60.5
DCAR_015417 Daucus carota HOM05D003907 ORTHO05D004819 8.9e-165 584.3 504 65.9
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla HOM05D003907 ORTHO05D004819 1.3e-160 570.5 325 91.1
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 6.6e-160 568.2 347 84.7
Pp3c23_4110 Physcomitrium patens HOM05D003907 ORTHO05D004819 1.0e-157 560.8 501 56.3
Actinidia11586 Actinidia chinensis HOM05D003907 ORTHO05D004819 2.7e-153 546.2 457 68.5
Glyma.16G099300 Glycine max HOM05D003907 ORTHO05D004819 3.7e-147 525.8 307 88.9
Actinidia27153 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.6e-142 510.4 284 93.7
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis HOM05D003907 ORTHO05D004819 8.9e-133 478.0 383 62.7
Actinidia29101 Actinidia chinensis HOM05D003907 ORTHO05D004819 9.0e-125 451.4 254 89.4
PRCOL_00002088 Prasinoderma coloniale HOM05D003907 ORTHO05D004819 2.1e-118 430.3 513 47.8
Actinidia29102 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.1e-114 417.9 245 89.8
MCO03G500 Micromonas commoda HOM05D003907 ORTHO05D004819 2.9e-107 393.3 486 45.1
SMO015G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.6e-105 387.5 386 54.1
SEGI_00285 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 1.0e-104 384.8 268 76.5
Cre01.g023400 Chlamydomonas reinhardtii HOM05D003907 ORTHO05D004819 1.6e-97 360.9 519 38.5
CSS0040994 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 1.9e-87 327.4 199 87.9
SMO173G0027 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.9e-72 276.6 345 47.2
TPR.G8133 Trifolium pratense HOM05D003907 ORTHO05D038338 1.1e-66 258.5 503 38.0
SMO173G0021 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.0e-59 235.3 289 47.1
SEGI_07345 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 1.7e-59 234.6 144 83.3
SMO023G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D376622 1.6e-57 228.0 365 41.4
ATR0759G042 Amborella trichopoda HOM05D003907 ORTHO05D038338 4.0e-48 196.8 117 82.1
ATR0759G047 Amborella trichopoda HOM05D003907 ORTHO05D004819 1.7e-46 191.4 143 74.8
SMO146G0194 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.1e-45 188.7 206 52.4
SMO173G0002 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.3e-43 181.0 197 51.8
Ca_20230_v3 Cicer arietinum L. HOM05D003907 ORTHO05D148210 1.6e-33 148.3 106 72.6
SMO146G0334 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 4.4e-31 140.2 119 58.0
BcaC01g04205 Brassica carinata HOM05D003907 ORTHO05D004819 6.4e-30 136.3 82 87.8
VMungo1080G1595 Vigna mungo HOM05D003907 ORTHO05D004819 8.3e-22 109.4 121 58.7
SMO173G0093 Selaginella moellendorffii HOM05D003907 ORTHO05D378519 5.1e-11 73.6 63 58.7
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea HOM05D003907 ORTHO05D018508 5.6e-10 70.1 39 84.6
arahy.Tifrunner.gnm1.ann1.7H636Z Arachis hypogaea HOM05D005380 ORTHO05D006601 1.1e-08 65.9 37 83.8


User provided reference genes

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