Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 0.0e+00 1379.0 718 100.0
Nn2g13619 Nelumbo nucifera HOM05D004806 ORTHO05D005397 6.2e-265 917.5 721 71.8
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 6.1e-228 794.7 724 64.8
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 7.0e-208 728.0 727 59.0
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 8.3e-201 704.5 741 57.8
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 9.1e-200 701.0 720 57.8
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 1.7e-198 696.8 718 58.5
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 1.7e-198 696.8 718 58.5
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 2.4e-192 676.4 682 57.2
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 2.9e-190 669.5 699 55.2
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 5.6e-189 665.2 621 60.2
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 3.6e-188 662.5 728 54.1
Aqoxy4G02663 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 1.0e-187 661.0 682 57.3
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 2.3e-187 659.8 681 57.1
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 3.4e-186 656.0 639 57.9
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 1.7e-185 653.7 709 56.0
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 2.4e-184 649.8 681 56.4
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 4.1e-184 649.0 709 53.6
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 4.1e-184 649.0 683 57.0
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 5.4e-184 648.7 709 57.3
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.2e-183 647.5 681 54.8
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 4.6e-183 645.6 698 55.2
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.7e-182 643.7 683 56.1
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 2.3e-182 643.3 680 55.0
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 3.0e-182 642.9 662 57.1
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 3.9e-182 642.5 680 54.7
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 3.9e-182 642.5 683 56.4
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 8.6e-182 641.3 668 56.3
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 1.5e-181 640.6 722 55.3
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 7.3e-181 638.3 658 57.3
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.6e-180 637.1 682 56.3
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 2.1e-180 636.7 727 53.6
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 3.6e-180 636.0 673 54.8
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 3.1e-179 632.9 701 53.6
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 1.3e-177 627.5 713 53.9
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 3.5e-175 619.4 729 51.2
COL.COLO4_25659 Corchorus olitorius HOM05D004806 ORTHO05D005397 2.5e-173 613.2 724 52.3
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 5.6e-173 612.1 688 53.6
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 5.6e-173 612.1 633 55.0
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 3.6e-172 609.4 633 55.1
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 7.5e-170 601.7 722 53.2
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 1.7e-169 600.5 656 54.4
Hund13832 Selenicereus undatus HOM05D004806 ORTHO05D005397 3.2e-168 596.3 646 53.4
Hund15980 Selenicereus undatus HOM05D004806 ORTHO05D005397 1.3e-166 590.9 767 48.9
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 1.7e-166 590.5 714 50.8
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 2.1e-164 583.6 699 51.2
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 2.1e-164 583.6 719 51.2
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 3.6e-164 582.8 672 52.4
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 4.7e-164 582.4 712 51.3
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 4.7e-164 582.4 671 53.1
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 1.1e-163 581.3 720 49.6
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 4.0e-163 579.3 751 49.5
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 5.2e-163 578.9 721 50.8
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 7.6e-162 575.1 736 50.1
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 2.9e-161 573.2 741 49.7
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 7.1e-160 568.5 662 53.0
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 1.0e-158 564.7 671 52.2
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 3.9e-158 562.8 638 54.7
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 3.3e-157 559.7 645 51.6
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 3.3e-157 559.7 626 53.0
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 6.2e-156 555.4 663 52.3
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 3.4e-154 549.7 663 51.1
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 7.6e-154 548.5 699 51.2
Sc11g0007270 Simmondsia chinensis HOM05D004806 ORTHO05D005397 1.7e-153 547.4 717 50.1
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 2.9e-153 546.6 700 50.0
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 6.4e-153 545.4 634 52.2
Ah.16g103100 Amaranthus hybridus HOM05D004806 ORTHO05D005397 6.0e-151 538.9 642 51.4
PSO801G0450 Papaver somniferum HOM05D004806 ORTHO05D005397 5.1e-150 535.8 733 50.3
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 1.9e-149 533.9 632 52.1
Nitab4.5_0004338g0050 Nicotiana tabacum HOM05D004806 ORTHO05D005397 2.5e-149 533.5 598 53.3
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 9.6e-149 531.6 800 44.8
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 4.0e-147 526.2 631 51.7
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 6.9e-147 525.4 729 48.6
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 2.0e-146 523.9 631 51.3
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 9.9e-146 521.5 629 51.7
Haze_17182 Corylus avellana HOM05D004806 ORTHO05D005397 1.4e-144 517.7 556 54.0
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 2.4e-144 516.9 662 49.1
PSO339G2633 Papaver somniferum HOM05D004806 ORTHO05D005397 1.3e-142 511.1 753 48.1
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 3.9e-142 509.6 712 47.6
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 1.3e-140 504.6 645 49.6
Nitab4.5_0002100g0120 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.6e-140 504.2 627 49.4
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 4.0e-139 499.6 712 46.3
ClCG11G006350 Citrullus lanatus HOM05D004806 ORTHO05D005397 1.1e-136 491.5 593 50.8
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 1.1e-136 491.5 677 48.6
CsaV3_6G001640 Cucumis sativus L. HOM05D004806 ORTHO05D005397 1.9e-136 490.7 581 50.6
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 7.1e-136 488.8 570 53.3
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 1.6e-132 477.6 675 46.5
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 2.0e-130 470.7 640 46.4
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 1.1e-128 464.9 650 46.5
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 2.1e-127 460.7 709 46.1
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 1.0e-126 458.4 697 45.1
unitig_52.g16836 Utricularia gibba HOM05D004806 ORTHO05D005397 5.0e-121 439.5 746 42.9
Zm00001eb297980 Zea mays HOM05D004806 ORTHO05D005397 2.2e-116 424.1 572 47.4
HanXRQChr07g0200671 Helianthus annuus HOM05D004806 ORTHO05D005397 1.2e-114 418.3 665 43.3
Carub.0004s2208 Capsella rubella HOM05D004806 ORTHO05D005397 2.9e-113 413.7 698 42.7
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 5.7e-109 399.4 689 44.0
AT2G39950 Arabidopsis thaliana HOM05D004806 ORTHO05D005397 4.8e-108 396.4 675 43.1
Oeu036630.1 Olea europaea HOM05D004806 ORTHO05D005397 4.8e-108 396.4 512 47.5
HanXRQChr08g0222261 Helianthus annuus HOM05D004806 ORTHO05D005397 9.1e-107 392.1 605 45.0
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 4.5e-106 389.8 665 42.4
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 8.5e-105 385.6 622 43.4
Manes.07G125400 Manihot esculenta HOM05D004806 ORTHO05D005397 4.7e-103 379.8 422 54.7
TAR623G1028 Trochodendron aralioides HOM05D004806 ORTHO05D005397 2.3e-102 377.5 617 44.6
Sed0010788 Sechium edule HOM05D004806 ORTHO05D005397 8.8e-102 375.6 500 48.4
SGA_v2.0_scaffold76G25081 Striga asiatica HOM05D004806 ORTHO05D005397 1.3e-100 371.7 724 40.3
Rhsim03G0140100 Rhododendron simsii HOM05D004806 ORTHO05D005397 2.2e-100 370.9 596 42.3
Glyma.02G254400 Glycine max HOM05D004806 ORTHO05D005397 3.7e-100 370.2 470 50.2
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 2.6e-98 364.0 646 41.3
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 2.6e-98 364.0 646 41.3
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 5.9e-98 362.8 711 39.1
SGA_v2.0_scaffold343G49443 Striga asiatica HOM05D004806 ORTHO05D005397 1.2e-95 355.1 568 44.2
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 5.0e-89 333.2 638 40.3
Sc11g0006990 Simmondsia chinensis HOM05D004806 ORTHO05D005397 1.1e-88 332.0 285 63.2
GSVIVG01016366001 Vitis vinifera HOM05D004806 ORTHO05D005397 9.1e-83 312.4 191 80.6
ATR0618G022 Amborella trichopoda HOM05D004806 ORTHO05D005397 1.2e-77 295.4 262 61.1
Lalb_Chr17g0346601 Lupinus albus HOM05D004806 ORTHO05D005397 5.4e-75 286.6 515 41.7
CARHR134870 Cardamine hirsuta HOM05D004806 ORTHO05D005397 2.0e-69 268.1 515 41.7
CDE09G0712 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 9.5e-64 249.2 202 61.9
AagrBONN_evm.TU.Sc2ySwM_368.289 Anthoceros agrestis HOM05D004806 ORTHO05D005397 9.5e-56 222.6 223 52.5
Mapoly0096s0071 Marchantia polymorpha HOM05D004806 ORTHO05D005397 2.0e-53 214.9 222 51.8
RcHm_v2.0_Chr1g0369361 Rosa chinensis HOM05D004806 ORTHO05D005397 1.6e-47 195.3 182 59.9
CDE09G1248 Ceratophyllum demersum HOM05D000530 ORTHO05D003341 4.7e-47 193.7 280 48.2
SHI03525 Sapria himalayana HOM05D004806 ORTHO05D005397 8.9e-46 189.5 471 34.2
CBR_g37391 Chara braunii HOM05D004806 ORTHO05D005397 1.4e-43 182.2 362 35.6
Sabra10G0148400 Salix brachista HOM05D004806 ORTHO05D005397 3.3e-40 171.0 178 56.7
MD07G1214200 Malus domestica HOM05D004806 ORTHO05D005397 5.6e-40 170.2 152 63.2
TPR.G40368 Trifolium pratense HOM05D004806 ORTHO05D005397 1.2e-37 162.5 163 59.5
Oeu059753.1 Olea europaea HOM05D004806 ORTHO05D005397 2.6e-37 161.4 110 73.6
Oeu022381.1 Olea europaea HOM05D004806 ORTHO05D005397 2.9e-36 157.9 135 62.2
SMO358G0301 Selaginella moellendorffii HOM05D004806 ORTHO05D005397 2.4e-35 154.8 371 34.2
Lalb_Chr17g0346611 Lupinus albus HOM05D004806 ORTHO05D005397 1.7e-33 148.7 110 67.3
BcaB02g09066 Brassica carinata HOM05D004806 ORTHO05D005397 1.1e-32 146.0 230 40.0
A05p06470 Brassica napus HOM05D004806 ORTHO05D005397 1.7e-28 132.1 96 67.7
ATR0618G087 Amborella trichopoda HOM05D004806 ORTHO05D005397 1.1e-27 129.4 116 61.2
SHI03526 Sapria himalayana HOM05D004806 ORTHO05D005397 3.5e-26 124.4 156 47.4
AagrBONN_evm.TU.Sc2ySwM_369.624 Anthoceros agrestis HOM05D004806 ORTHO05D005397 1.0e-25 122.9 423 30.7
Haze_17183 Corylus avellana HOM05D004806 ORTHO05D005397 4.0e-22 110.9 85 67.1
Os07g0100500 Oryza sativa ssp. japonica HOM05D004806 ORTHO05D005397 3.4e-21 107.8 77 67.5
ATR0723G011 Amborella trichopoda HOM05D004806 ORTHO05D005397 2.4e-19 101.7 72 63.9
Zm00001eb057510 Zea mays HOM05D004806 ORTHO05D005397 2.3e-17 95.1 73 61.6
SalBow6G4818 Salvia bowleyana HOM05D004806 ORTHO05D005397 2.8e-15 88.2 137 46.0
Oeu043075.1 Olea europaea HOM05D004806 ORTHO05D005397 8.4e-12 76.6 139 43.2
CAN.G853.43 Capsicum annuum HOM05D004806 ORTHO05D005397 1.4e-11 75.9 65 60.0
RcHm_v2.0_Chr1g0313541 Rosa chinensis HOM05D004806 ORTHO05D005397 3.5e-10 71.2 62 61.3
Pp3c26_8620 Physcomitrium patens HOM05D004806 ORTHO05D005397 2.3e-09 68.6 122 31.1
Ah.05g175410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 3.0e-09 68.2 55 61.8
Oeu059752.1 Olea europaea HOM05D004806 ORTHO05D005397 1.5e-08 65.9 124 39.5
MBI19_g13733_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D011443 1.6e-07 62.4 41 70.7
Oeu021121.1 Olea europaea HOM05D004806 ORTHO05D005397 1.1e-06 59.7 42 66.7


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