Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g11287 Nelumbo nucifera HOM05D007156 ORTHO05D003871 1.3e-85 319.7 167 100.0
MELO3C003184.2 Cucumis melo HOM05D007866 ORTHO05D003871 2.2e-08 63.2 75 38.7
CiPaw.04G120100 Carya illinoinensis HOM05D007156 ORTHO05D003871 1.1e-07 60.8 72 41.7
CsaV3_4G025580 Cucumis sativus L. HOM05D007866 ORTHO05D003871 1.1e-07 60.8 75 40.0
BcaC01g04222 Brassica carinata HOM05D007866 ORTHO05D003871 9.4e-07 57.8 93 31.2
Sed0007405 Sechium edule HOM05D007156 ORTHO05D003871 1.2e-06 57.4 68 47.1
C03p43730 Brassica napus HOM05D007866 ORTHO05D003871 1.6e-06 57.0 72 34.7
Rhsim06G0154900 Rhododendron simsii HOM05D007156 ORTHO05D003871 1.6e-06 57.0 51 49.0
Nitab4.5_0000362g0160 Nicotiana tabacum HOM05D007866 ORTHO05D003871 2.1e-06 56.6 43 51.2
Sed0027672 Sechium edule HOM05D007866 ORTHO05D003871 2.1e-06 56.6 69 40.6
arahy.Tifrunner.gnm1.ann1.ABE34K Arachis hypogaea HOM05D007156 ORTHO05D003871 2.7e-06 56.2 87 41.4
CSS0047873 Camellia sinensis var. sinensis HOM05D007866 ORTHO05D003871 2.7e-06 56.2 42 50.0
Cfa014479 Carpinus fangiana HOM05D007156 ORTHO05D003871 2.7e-06 56.2 74 41.9
MBI02_g42366_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.7e-06 56.2 89 37.1
MBI02_g43088_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.7e-06 56.2 89 37.1
Haze_12992 Corylus avellana HOM05D007156 ORTHO05D003871 3.6e-06 55.8 73 42.5
Peaxi162Scf00014g00168 Petunia axillaris HOM05D007866 ORTHO05D003871 3.6e-06 55.8 48 45.8
Ciclev10017232m.g Citrus clementina HOM05D007156 ORTHO05D003871 4.7e-06 55.5 70 41.4
QL08p034497 Quercus lobata HOM05D007156 ORTHO05D003871 4.7e-06 55.5 73 42.5
Solyc09g011430.1 Solanum lycopersicum HOM05D007866 ORTHO05D003871 4.7e-06 55.5 72 38.9
Atru.chr6.3108 Acer truncatum HOM05D007156 ORTHO05D003871 6.1e-06 55.1 66 43.9
Manes.12G077701 Manihot esculenta HOM05D007156 ORTHO05D003871 6.1e-06 55.1 75 40.0
Nitab4.5_0008116g0010 Nicotiana tabacum HOM05D007866 ORTHO05D003871 6.1e-06 55.1 43 53.5
Actinidia29169 Actinidia chinensis HOM05D007866 ORTHO05D003871 8.0e-06 54.7 43 53.5
Nitab4.5_0001302g0030 Nicotiana tabacum HOM05D007156 ORTHO05D003871 8.0e-06 54.7 55 45.5
RcHm_v2.0_Chr2g0160641 Rosa chinensis HOM05D007156 ORTHO05D003871 8.0e-06 54.7 86 37.2


User provided reference genes

Program Settings