Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g11183 Nelumbo nucifera HOM05D006045 ORTHO05D007678 8.3e-241 836.6 430 100.0
TAR623G1560 Trochodendron aralioides HOM05D006045 ORTHO05D007678 1.5e-165 586.6 434 70.5
QL07p030118 Quercus lobata HOM05D006045 ORTHO05D007678 5.8e-141 505.0 436 61.9
Prupe.6G259100 Prunus persica HOM05D006045 ORTHO05D007678 3.7e-140 502.3 439 62.6
CiPaw.09G195700 Carya illinoinensis HOM05D006045 ORTHO05D007678 8.3e-140 501.1 434 61.5
QL07p030894 Quercus lobata HOM05D006045 ORTHO05D007678 5.4e-139 498.4 436 61.5
MD12G1145400 Malus domestica HOM05D006045 ORTHO05D007678 3.0e-137 492.7 382 66.5
GSVIVG01034130001 Vitis vinifera HOM05D006045 ORTHO05D007678 4.7e-135 485.3 382 64.4
PSO339G1759 Papaver somniferum HOM05D006045 ORTHO05D007678 1.1e-134 484.2 407 62.7
Thecc.05G035700 Theobroma cacao HOM05D006045 ORTHO05D007678 4.0e-134 482.3 434 59.7
Potri.002G091400 Populus trichocarpa HOM05D006045 ORTHO05D007678 1.5e-133 480.3 438 60.3
CSS0032526 Camellia sinensis var. sinensis HOM05D006045 ORTHO05D007678 4.1e-131 472.2 442 59.7
PGR004G1833 Punica granatum HOM05D006045 ORTHO05D007678 7.0e-131 471.5 437 58.6
Gorai.009G406000 Gossypium raimondii HOM05D006045 ORTHO05D007678 1.0e-129 467.6 402 62.4
Manes.09G092411 Manihot esculenta HOM05D006045 ORTHO05D007678 2.3e-129 466.5 435 59.3
CANSAT35G0136 Cannabis sativa HOM05D006045 ORTHO05D007678 3.0e-129 466.1 437 58.6
FvH4_6g13250 Fragaria vesca HOM05D006045 ORTHO05D007678 3.9e-129 465.7 446 59.6
FAN02G2147 Fragaria x ananassa HOM05D006045 ORTHO05D007678 3.3e-128 462.6 446 59.2
Ciclev10011734m.g Citrus clementina HOM05D006045 ORTHO05D007678 1.2e-127 460.7 390 62.1
Gohir.D04G102700 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.6e-127 460.3 402 61.7
FAN14G1932 Fragaria x ananassa HOM05D006045 ORTHO05D007678 2.8e-127 459.5 457 58.4
RcHm_v2.0_Chr3g0466081 Rosa chinensis HOM05D006045 ORTHO05D007678 4.7e-127 458.8 447 58.6
AUR62034450 Chenopodium quinoa HOM05D006045 ORTHO05D007678 6.2e-127 458.4 444 55.9
AUR62018119 Chenopodium quinoa HOM05D006045 ORTHO05D007678 1.1e-126 457.6 408 59.3
DCAR_028758 Daucus carota HOM05D006045 ORTHO05D007678 1.8e-126 456.8 399 62.2
Eucgr.K03104 Eucalyptus grandis HOM05D006045 ORTHO05D007678 1.8e-126 456.8 396 60.6
Gohir.A04G065300 Gossypium hirsutum HOM05D006045 ORTHO05D007678 3.1e-126 456.1 402 61.9
CAN.G597.3 Capsicum annuum HOM05D006045 ORTHO05D007678 2.0e-125 453.4 440 60.5
PGSC0003DMG400008825 Solanum tuberosum HOM05D006045 ORTHO05D007678 2.9e-124 449.5 388 63.9
TWI77G0138 Tripterygium wilfordii HOM05D006045 ORTHO05D007678 1.4e-123 447.2 398 61.1
Hund15247 Selenicereus undatus HOM05D006045 ORTHO05D007678 3.2e-123 446.0 426 56.1
Duzib106G0862 Durio zibethinus HOM05D006045 ORTHO05D007678 4.1e-123 445.7 434 56.9
Sabra02G0072200 Salix brachista HOM05D006045 ORTHO05D007678 4.1e-123 445.7 433 57.5
Sopen09g005740 Solanum pennellii HOM05D006045 ORTHO05D007678 6.0e-122 441.8 388 63.4
Solyc09g011020.4 Solanum lycopersicum HOM05D006045 ORTHO05D007678 6.6e-121 438.3 388 63.4
MBI14_g08020_MAGBIO Magnolia biondii HOM05D006045 ORTHO05D007678 4.0e-118 429.1 406 59.1
EL10Ac2g03023 Beta vulgaris HOM05D006045 ORTHO05D007678 8.9e-118 427.9 404 57.9
vmacro08642 Vaccinium macrocarpon HOM05D006045 ORTHO05D007678 1.2e-117 427.6 400 58.0
CDE06G1975 Ceratophyllum demersum HOM05D006045 ORTHO05D007678 1.3e-116 424.1 399 57.6
MD04G1132700 Malus domestica HOM05D006045 ORTHO05D007678 2.2e-116 423.3 375 61.6
THA.LOC104816254 Tarenaya hassleriana HOM05D006045 ORTHO05D007678 2.2e-116 423.3 390 55.6
Oeu010102.1 Olea europaea HOM05D006045 ORTHO05D007678 3.8e-116 422.5 406 56.4
Lsat_1_v5_gn_5_154000 Lactuca sativa HOM05D006045 ORTHO05D007678 3.5e-114 416.0 405 57.5
BcaB01g06214 Brassica carinata HOM05D006045 ORTHO05D007678 1.3e-113 414.1 432 53.7
AT5G02130 Arabidopsis thaliana HOM05D006045 ORTHO05D007678 1.7e-113 413.7 435 53.1
Cfa017339 Carpinus fangiana HOM05D006045 ORTHO05D007678 6.6e-113 411.8 377 58.9
HanXRQChr13g0406931 Helianthus annuus HOM05D006045 ORTHO05D007678 8.7e-113 411.4 405 55.8
Haze_20828 Corylus avellana HOM05D006045 ORTHO05D007678 1.5e-112 410.6 377 58.6
BraA03t09445Z Brassica rapa HOM05D006045 ORTHO05D007678 4.3e-112 409.1 426 52.6
MELO3C009242.2 Cucumis melo HOM05D006045 ORTHO05D007678 7.3e-112 408.3 405 56.0
AL6G11360 Arabidopsis lyrata HOM05D006045 ORTHO05D007678 1.3e-111 407.5 429 52.7
Cc06_g02350 Coffea canephora HOM05D006045 ORTHO05D007678 2.1e-111 406.8 389 57.3
Thhalv10013663m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 6.2e-111 405.2 421 53.4
BolC9t60170H Brassica oleracea HOM05D006045 ORTHO05D007678 1.4e-110 404.1 422 52.8
ATR0559G357 Amborella trichopoda HOM05D006045 ORTHO05D007678 2.4e-110 403.3 428 53.0
Sed0026133 Sechium edule HOM05D006045 ORTHO05D007678 2.4e-110 403.3 442 50.2
ECA248G0328 Erigeron canadensis HOM05D006045 ORTHO05D007678 3.1e-110 402.9 395 57.2
BraA10t45376Z Brassica rapa HOM05D006045 ORTHO05D007678 1.5e-109 400.6 434 51.4
Sp6g40310 Schrenkiella parvula HOM05D006045 ORTHO05D007678 2.6e-109 399.8 425 51.1
C09p74360 Brassica napus HOM05D006045 ORTHO05D007678 3.4e-109 399.4 422 52.6
Lj1g0013519 Lotus japonicus HOM05D006045 ORTHO05D007678 1.3e-108 397.5 388 55.9
Aa31LG1G22600 Aethionema arabicum HOM05D006045 ORTHO05D007678 2.2e-108 396.7 394 55.3
Carub.0006s0097 Capsella rubella HOM05D006045 ORTHO05D007678 3.8e-108 396.0 431 50.8
Rhsim04G0158800 Rhododendron simsii HOM05D006045 ORTHO05D007678 3.8e-108 396.0 516 47.1
CARHR211230 Cardamine hirsuta HOM05D006045 ORTHO05D007678 1.9e-107 393.7 432 52.3
A03p00550 Brassica napus HOM05D006045 ORTHO05D007678 2.4e-107 393.3 459 49.5
Lj3g0020199 Lotus japonicus HOM05D006045 ORTHO05D007678 1.2e-106 391.0 435 50.8
CsaV3_3G034720 Cucumis sativus L. HOM05D006045 ORTHO05D007678 2.3e-105 386.7 405 53.8
MSTRG.19073 Avicennia marina HOM05D006045 ORTHO05D007678 3.0e-105 386.3 394 54.6
SHI12713 Sapria himalayana HOM05D006045 ORTHO05D007678 1.1e-104 384.4 442 50.7
Lalb_Chr03g0042401 Lupinus albus HOM05D006045 ORTHO05D007678 2.5e-104 383.3 445 49.7
A10p33460 Brassica napus HOM05D006045 ORTHO05D007678 3.3e-104 382.9 467 47.5
Migut.J00307 Erythranthe guttata HOM05D006045 ORTHO05D007678 2.4e-102 376.7 404 52.2
arahy.Tifrunner.gnm1.ann1.H3QXFP Arachis hypogaea HOM05D006045 ORTHO05D007678 5.8e-101 372.1 416 50.2
Lj3A965G74 Lonicera japonica HOM05D006045 ORTHO05D007678 2.9e-100 369.8 302 66.2
Sc22g0004440 Simmondsia chinensis HOM05D006045 ORTHO05D007678 1.6e-98 364.0 319 62.1
SGA_v2.0_scaffold126G33761 Striga asiatica HOM05D006045 ORTHO05D007678 3.5e-98 362.8 404 51.0
Medtr7g062630 Medicago truncatula HOM05D006045 ORTHO05D007678 1.8e-97 360.5 393 50.1
Psat3g136040 Pisum sativum HOM05D006045 ORTHO05D007678 5.1e-97 359.0 410 48.8
Aqoxy1G00880 Aquilegia oxysepala HOM05D006045 ORTHO05D007678 6.7e-97 358.6 431 51.0
Glyma.18G185200 Glycine max HOM05D006045 ORTHO05D007678 4.3e-96 355.9 394 51.0
Ca_07336_v3 Cicer arietinum L. HOM05D006045 ORTHO05D007678 4.5e-93 345.9 410 48.3
BcaB01g06067 Brassica carinata HOM05D006045 ORTHO05D007678 6.5e-92 342.0 420 47.4
C03p00810 Brassica napus HOM05D006045 ORTHO05D007678 1.1e-86 324.7 421 44.2
Nitab4.5_0000705g0060 Nicotiana tabacum HOM05D006045 ORTHO05D007678 6.9e-86 322.0 294 60.9
ClCG10G021320 Citrullus lanatus HOM05D006045 ORTHO05D007678 2.0e-85 320.5 547 39.5
Nitab4.5_0003394g0010 Nicotiana tabacum HOM05D006045 ORTHO05D007678 3.4e-85 319.7 341 56.3
SEGI_25878 Sequoiadendron giganteum HOM05D006045 ORTHO05D007678 1.0e-84 318.2 438 44.1
VMungo1383G2703 Vigna mungo HOM05D006045 ORTHO05D007678 1.3e-84 317.8 347 51.9
Peaxi162Scf00527g00742 Petunia axillaris HOM05D006045 ORTHO05D007678 1.3e-79 301.2 313 55.0
arahy.Tifrunner.gnm1.ann1.FBGI2B Arachis hypogaea HOM05D006045 ORTHO05D007678 4.8e-79 299.3 331 48.3
Os05g0457700 Oryza sativa ssp. japonica HOM05D006045 ORTHO05D007678 4.8e-79 299.3 411 44.5
CiPaw.09G197100 Carya illinoinensis HOM05D006045 ORTHO05D007678 7.7e-77 292.0 216 69.4
FAN05G2873 Fragaria x ananassa HOM05D006045 ORTHO05D007678 7.4e-72 275.4 201 71.6
TPR.G18356 Trifolium pratense HOM05D006045 ORTHO05D007678 1.2e-69 268.1 287 50.5
Medtr6g445490 Medicago truncatula HOM05D006045 ORTHO05D007678 2.9e-68 263.5 440 38.9
Rhsim04G0160900 Rhododendron simsii HOM05D006045 ORTHO05D007678 1.1e-67 261.5 388 43.0
SalBow1G6939 Salvia bowleyana HOM05D006045 ORTHO05D007678 5.5e-67 259.2 300 49.3
HPP92_014298 Vanilla planifolia HOM05D006045 ORTHO05D007678 5.5e-67 259.2 250 55.2
PSO063G1044 Papaver somniferum HOM05D006045 ORTHO05D007678 2.8e-55 220.3 218 54.1
Atru.chr8.2013 Acer truncatum HOM05D006045 ORTHO05D007678 3.5e-53 213.4 440 36.1
Phvul.008G118100 Phaseolus vulgaris HOM05D006045 ORTHO05D007678 8.5e-52 208.8 270 43.7
Pp3c17_13640 Physcomitrium patens HOM05D006045 ORTHO05D007678 9.1e-46 188.7 371 35.0
Mapoly0002s0152 Marchantia polymorpha HOM05D006045 ORTHO05D007678 7.2e-43 179.1 417 33.1
SMO361G0160 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 2.1e-42 177.6 387 34.9
SMO361G0306 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 3.6e-42 176.8 388 34.5
COL.COLO4_14760 Corchorus olitorius HOM05D006045 ORTHO05D007678 2.0e-37 161.0 292 37.7
Gohir.A04G065314 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.6e-34 151.4 107 69.2
PSO339G4427 Papaver somniferum HOM05D006045 ORTHO05D007678 2.8e-34 150.6 168 51.2
CBR_g8766 Chara braunii HOM05D006045 ORTHO05D007678 2.0e-32 144.4 461 29.3
Cpa.g.sc169.5 Carica papaya HOM05D006045 ORTHO05D007678 1.1e-30 138.7 172 51.2
Hma1.2p1_0028F.1_g017940 Hydrangea macrophylla HOM05D006045 ORTHO05D007678 2.5e-27 127.5 97 63.9
MD07G1261700 Malus domestica HOM05D006045 ORTHO05D007678 6.8e-25 119.4 123 56.1
Zm00001eb351230 Zea mays HOM05D006045 ORTHO05D007678 2.3e-20 104.4 246 34.1
HPP92_014299 Vanilla planifolia HOM05D006045 ORTHO05D007678 2.8e-18 97.4 124 47.6
Dinv35575 Davidia involucrata HOM05D006045 ORTHO05D007678 4.7e-10 70.1 71 54.9
Thhalv10015964m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 2.2e-07 61.2 153 34.6
Medtr7g062690 Medicago truncatula HOM05D006045 ORTHO05D007678 2.2e-07 61.2 75 50.7
TPR.G40448 Trifolium pratense HOM05D006045 ORTHO05D007678 2.9e-07 60.8 59 55.9
Lsat_1_v5_gn_1_108300 Lactuca sativa HOM05D000747 ORTHO05D015226 8.4e-07 59.3 75 42.7


User provided reference genes

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