Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g10877 Nelumbo nucifera HOM05D001170 ORTHO05D008741 7.1e-84 313.9 162 100.0
Dinv09288 Davidia involucrata HOM05D001170 ORTHO05D008741 2.0e-30 136.3 120 58.3
TAR623G1719 Trochodendron aralioides HOM05D001594 ORTHO05D002862 2.0e-30 136.3 131 58.0
TWI74G0526 Tripterygium wilfordii HOM05D001170 ORTHO05D008741 4.2e-28 128.6 131 54.2
Prupe.6G279600 Prunus persica HOM05D001170 ORTHO05D008741 9.4e-28 127.5 118 55.9
CSS0009561 Camellia sinensis var. sinensis HOM05D001170 ORTHO05D008741 1.2e-27 127.1 121 56.2
Aqoxy4G02521 Aquilegia oxysepala HOM05D001170 ORTHO05D008741 1.6e-27 126.7 121 53.7
Manes.08G093600 Manihot esculenta HOM05D001170 ORTHO05D008741 3.6e-27 125.6 138 50.0
GSVIVG01011178001 Vitis vinifera HOM05D001170 ORTHO05D008741 8.0e-27 124.4 132 54.5
Actinidia05360 Actinidia chinensis HOM05D001170 ORTHO05D008741 3.0e-26 122.5 133 54.1
Cpa.g.sc11.97 Carica papaya HOM05D001170 ORTHO05D008741 1.5e-25 120.2 132 49.2
Gorai.006G183400 Gossypium raimondii HOM05D001170 ORTHO05D008741 2.0e-25 119.8 132 50.8
Gohir.A09G166100 Gossypium hirsutum HOM05D001170 ORTHO05D008741 3.3e-25 119.0 132 50.0
Hma1.2p1_0362F.1_g136420 Hydrangea macrophylla HOM05D001170 ORTHO05D008741 5.7e-25 118.2 136 52.2
Lj2A72T46 Lonicera japonica HOM05D001170 ORTHO05D008741 5.7e-25 118.2 129 54.3
CANSAT35G0043 Cannabis sativa HOM05D001170 ORTHO05D008741 7.5e-25 117.9 135 49.6
Gohir.D09G161700 Gossypium hirsutum HOM05D001170 ORTHO05D008741 9.7e-25 117.5 132 50.8
Haze_20986 Corylus avellana HOM05D001170 ORTHO05D008741 1.7e-24 116.7 131 51.1
QL07p035137 Quercus lobata HOM05D001170 ORTHO05D008741 1.7e-24 116.7 130 52.3
CARHR132850 Cardamine hirsuta HOM05D001170 ORTHO05D008741 1.1e-23 114.0 131 51.9
Thecc.05G013600 Theobroma cacao HOM05D001170 ORTHO05D008741 1.8e-23 113.2 131 49.6
Cfa017188 Carpinus fangiana HOM05D001170 ORTHO05D008741 2.4e-23 112.8 131 50.4
Sabra16G0115100 Salix brachista HOM05D001170 ORTHO05D008741 2.4e-23 112.8 133 47.4
Lsat_1_v5_gn_8_101640 Lactuca sativa HOM05D001170 ORTHO05D008741 7.0e-23 111.3 143 46.9
PSO384G1831 Papaver somniferum HOM05D001170 ORTHO05D008741 7.0e-23 111.3 145 49.0
Potri.016G119200 Populus trichocarpa HOM05D001170 ORTHO05D008741 1.2e-22 110.5 136 49.3
vmacro08884 Vaccinium macrocarpon HOM05D001170 ORTHO05D008741 1.2e-22 110.5 138 50.0
Ciclev10012321m.g Citrus clementina HOM05D001170 ORTHO05D008741 1.6e-22 110.2 119 52.1
COL.COLO4_14511 Corchorus olitorius HOM05D001343 ORTHO05D002008 1.6e-22 110.2 133 46.6
Atru.chr8.2265 Acer truncatum HOM05D001170 ORTHO05D008741 4.5e-22 108.6 124 47.6
Thhalv10017037m.g Eutrema salsugineum HOM05D001170 ORTHO05D008741 5.9e-22 108.2 131 50.4
Cc06_g01160 Coffea canephora HOM05D001170 ORTHO05D008741 7.7e-22 107.8 96 61.5
FvH4_6g11240 Fragaria vesca HOM05D001170 ORTHO05D008741 7.7e-22 107.8 129 53.5
FAN14G2338 Fragaria x ananassa HOM05D001170 ORTHO05D008741 7.7e-22 107.8 129 53.5
FAN14G4496 Fragaria x ananassa HOM05D001170 ORTHO05D008741 1.0e-21 107.5 129 53.5
PGSC0003DMG400004454 Solanum tuberosum HOM05D001170 ORTHO05D008741 1.0e-21 107.5 129 50.4
Duzib093G1404 Durio zibethinus HOM05D001170 ORTHO05D008741 1.7e-21 106.7 132 47.7
Solyc09g005620.4 Solanum lycopersicum HOM05D001170 ORTHO05D008741 1.7e-21 106.7 132 50.0
MBI15_g13301_MAGBIO Magnolia biondii HOM05D001170 ORTHO05D008741 2.2e-21 106.3 123 53.7
CDE06G1991 Ceratophyllum demersum HOM05D001170 ORTHO05D008741 2.9e-21 105.9 140 45.0
PSO339G6149 Papaver somniferum HOM05D001170 ORTHO05D008741 2.9e-21 105.9 143 46.9
Sopen00g009970 Solanum pennellii HOM05D001170 ORTHO05D008741 2.9e-21 105.9 132 50.0
Sopen09g001520 Solanum pennellii HOM05D001170 ORTHO05D008741 2.9e-21 105.9 132 50.0
DCAR_018690 Daucus carota HOM05D001170 ORTHO05D008741 3.8e-21 105.5 129 49.6
Migut.L02023 Erythranthe guttata HOM05D001170 ORTHO05D008741 1.1e-20 104.0 135 50.4
FAN09G0318 Fragaria x ananassa HOM05D001170 ORTHO05D008741 1.5e-20 103.6 128 51.6
Oeu063396.1 Olea europaea HOM05D001170 ORTHO05D008741 1.5e-20 103.6 121 49.6
ECA236G0793 Erigeron canadensis HOM05D001170 ORTHO05D008741 1.9e-20 103.2 135 48.1
ATR0681G276 Amborella trichopoda HOM05D001170 ORTHO05D008741 2.5e-20 102.8 108 52.8
AL4G35310 Arabidopsis lyrata HOM05D001170 ORTHO05D008741 2.5e-20 102.8 135 50.4
A03p21110 Brassica napus HOM05D001170 ORTHO05D008741 5.5e-20 101.7 134 47.8
BraA03t11352Z Brassica rapa HOM05D001170 ORTHO05D008741 7.2e-20 101.3 134 47.8
CiPaw.09G210900 Carya illinoinensis HOM05D001170 ORTHO05D008741 7.2e-20 101.3 132 46.2
Sp4g20550 Schrenkiella parvula HOM05D001170 ORTHO05D008741 7.2e-20 101.3 132 47.7
BcaB01g03712 Brassica carinata HOM05D001170 ORTHO05D008741 9.4e-20 100.9 134 47.0
FAN02G4623 Fragaria x ananassa HOM05D001170 ORTHO05D008741 9.4e-20 100.9 129 51.2
PGR031G0399 Punica granatum HOM05D001170 ORTHO05D008741 9.4e-20 100.9 125 48.8
CAN.G133.10 Capsicum annuum HOM05D001170 ORTHO05D008741 1.2e-19 100.5 96 54.2
Peaxi162Scf00170g00120 Petunia axillaris HOM05D001170 ORTHO05D008741 2.7e-19 99.4 128 45.3
RcHm_v2.0_Chr3g0462751 Rosa chinensis HOM05D001170 ORTHO05D008741 3.6e-19 99.0 121 50.4
THA.LOC104805920 Tarenaya hassleriana HOM05D001170 ORTHO05D008741 4.7e-19 98.6 131 48.9
AT2G38270 Arabidopsis thaliana HOM05D001170 ORTHO05D008741 1.0e-18 97.4 133 47.4
Psat7g244840 Pisum sativum HOM05D000073 ORTHO05D000033 1.0e-18 97.4 128 45.3
BcaC01g05553 Brassica carinata HOM05D001170 ORTHO05D008741 2.3e-18 96.3 134 47.0
C03p25000 Brassica napus HOM05D001170 ORTHO05D008741 2.3e-18 96.3 134 47.0
BolC3t14891H Brassica oleracea HOM05D001170 ORTHO05D008741 2.3e-18 96.3 134 47.0
Sed0014265 Sechium edule HOM05D001170 ORTHO05D008741 3.0e-18 95.9 132 46.2
MELO3C009150.2 Cucumis melo HOM05D001170 ORTHO05D008741 4.0e-18 95.5 133 45.9
arahy.Tifrunner.gnm1.ann1.S2R1T1 Arachis hypogaea HOM05D001170 ORTHO05D008741 1.2e-17 94.0 140 46.4
arahy.Tifrunner.gnm1.ann1.FN1A8Q Arachis hypogaea HOM05D001170 ORTHO05D008741 2.0e-17 93.2 134 46.3
Aa31LG5G23190 Aethionema arabicum HOM05D001170 ORTHO05D008741 2.6e-17 92.8 135 46.7
AL4G35350 Arabidopsis lyrata HOM05D001170 ORTHO05D008741 2.6e-17 92.8 111 52.3
ClCG10G022280 Citrullus lanatus HOM05D001170 ORTHO05D008741 3.4e-17 92.4 132 42.4
CsaV3_3G033600 Cucumis sativus L. HOM05D001170 ORTHO05D008741 3.4e-17 92.4 132 42.4
TPR.G34421 Trifolium pratense HOM05D001170 ORTHO05D008741 3.4e-17 92.4 132 45.5
Glyma.01G119900 Glycine max HOM05D001170 ORTHO05D008741 4.4e-17 92.0 140 44.3
Medtr4g016930 Medicago truncatula HOM05D001170 ORTHO05D008741 4.4e-17 92.0 131 46.6
HanXRQChr11g0331711 Helianthus annuus HOM05D001170 ORTHO05D008741 5.7e-17 91.7 137 46.7
Ca_20220_v3 Cicer arietinum L. HOM05D000073 ORTHO05D000033 1.3e-16 90.5 131 45.8
Carub.0004s2022 Capsella rubella HOM05D001170 ORTHO05D008741 1.7e-16 90.1 135 48.1
VMungo0331G0578 Vigna mungo HOM05D001170 ORTHO05D008741 1.7e-16 90.1 136 44.9
Nitab4.5_0000261g0040 Nicotiana tabacum HOM05D001170 ORTHO05D008741 2.2e-16 89.7 123 42.3
Lj3g0006921 Lotus japonicus HOM05D001170 ORTHO05D008741 4.8e-16 88.6 131 46.6
Hund10990 Selenicereus undatus HOM05D001170 ORTHO05D008741 6.3e-16 88.2 97 49.5
Eucgr.K02975 Eucalyptus grandis HOM05D001170 ORTHO05D008741 8.3e-16 87.8 72 58.3
Rhsim04G0126900 Rhododendron simsii HOM05D001170 ORTHO05D008741 1.8e-15 86.7 65 60.0
EL10Ac5g12545 Beta vulgaris HOM05D001343 ORTHO05D002008 2.4e-15 86.3 100 50.0
Glyma.03G056300 Glycine max HOM05D001170 ORTHO05D008741 3.1e-15 85.9 137 43.8
Lalb_Chr07g0192391 Lupinus albus HOM05D001170 ORTHO05D008741 3.1e-15 85.9 136 41.2
SalBow5G4502 Salvia bowleyana HOM05D001170 ORTHO05D008741 3.1e-15 85.9 133 41.4
Sc01g0006910 Simmondsia chinensis HOM05D001170 ORTHO05D008741 1.2e-14 84.0 114 46.5
SEGI_27167 Sequoiadendron giganteum HOM05D001170 ORTHO05D008741 2.0e-14 83.2 121 40.5
HPP92_019010 Vanilla planifolia HOM05D001170 ORTHO05D008741 5.9e-14 81.6 119 38.7
Phvul.010G075900 Phaseolus vulgaris HOM05D001170 ORTHO05D008741 7.7e-14 81.3 139 38.8
MSTRG.18998 Avicennia marina HOM05D001170 ORTHO05D008741 1.0e-13 80.9 133 42.1
Nitab4.5_0013095g0010 Nicotiana tabacum HOM05D001170 ORTHO05D008741 1.7e-13 80.1 116 41.4
unitig_26.g9085 Utricularia gibba HOM05D001170 ORTHO05D008741 3.8e-13 79.0 98 45.9
AUR62030484 Chenopodium quinoa HOM05D001170 ORTHO05D008741 5.0e-13 78.6 137 39.4
AUR62030807 Chenopodium quinoa HOM05D001170 ORTHO05D008741 8.5e-13 77.8 108 46.3
AagrBONN_evm.TU.Sc2ySwM_362.2023 Anthoceros agrestis HOM05D001170 ORTHO05D008741 4.2e-12 75.5 105 38.1
TPR.G39440 Trifolium pratense HOM05D001170 ORTHO05D008741 1.2e-11 73.9 131 40.5
SMO196G0158 Selaginella moellendorffii HOM05D001170 ORTHO05D008741 1.8e-10 70.1 90 42.2
Mapoly0001s0103 Marchantia polymorpha HOM05D001170 ORTHO05D008741 2.3e-10 69.7 90 38.9
Pp3c14_14790 Physcomitrium patens HOM05D001170 ORTHO05D008741 2.3e-10 69.7 72 48.6
Cre01.g047800 Chlamydomonas reinhardtii HOM05D001170 ORTHO05D008741 5.2e-10 68.6 78 52.6
Zm00001eb094310 Zea mays HOM05D001170 ORTHO05D008741 6.8e-10 68.2 103 40.8
Zm00001eb163210 Zea mays HOM05D001170 ORTHO05D008741 4.4e-09 65.5 109 41.3
Os12g0175500 Oryza sativa ssp. japonica HOM05D001170 ORTHO05D008741 9.8e-09 64.3 100 46.0
CBR_g22937 Chara braunii HOM05D001170 ORTHO05D008741 1.4e-07 60.5 57 45.6
SalBow7G0113 Salvia bowleyana HOM05D001170 ORTHO05D008741 1.2e-06 57.4 64 43.8


User provided reference genes

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