Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g10857 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.7e-41 172.2 84 100.0
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 5.6e-40 167.2 84 95.2
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 5.7e-37 157.1 84 88.1
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 1.3e-36 156.0 84 89.3
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 2.9e-36 154.8 84 83.3
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 3.7e-36 154.5 84 86.9
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 4.9e-36 154.1 84 85.7
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 4.9e-36 154.1 84 85.7
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 3.2e-35 151.4 84 86.9
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 5.4e-35 150.6 84 84.5
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 2.0e-34 148.7 84 83.3
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 2.0e-34 148.7 84 82.1
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 3.5e-34 147.9 83 81.9
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 7.8e-34 146.7 84 81.0
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 7.8e-34 146.7 82 84.1
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.0e-33 146.4 84 81.0
Aqoxy3G01439 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.0e-33 146.4 84 81.0
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 1.0e-33 146.4 84 83.3
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.3e-33 146.0 84 79.8
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 1.7e-33 145.6 82 81.7
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 1.7e-33 145.6 83 79.5
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 1.7e-33 145.6 84 79.8
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 1.7e-33 145.6 84 79.8
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 2.3e-33 145.2 82 81.7
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 2.3e-33 145.2 84 81.0
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 2.3e-33 145.2 84 81.0
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 2.3e-33 145.2 84 81.0
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 3.0e-33 144.8 84 82.1
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 3.0e-33 144.8 84 82.1
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 3.9e-33 144.4 84 79.8
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 3.9e-33 144.4 83 79.5
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 1.5e-32 142.5 81 82.7
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 1.5e-32 142.5 83 78.3
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 1.9e-32 142.1 84 82.1
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.9e-32 142.1 84 79.8
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 2.5e-32 141.7 83 77.1
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 3.3e-32 141.4 84 78.6
Psat4g182280 Pisum sativum HOM05D000751 ORTHO05D005618 3.3e-32 141.4 83 77.1
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 4.3e-32 141.0 84 75.0
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 5.6e-32 140.6 84 78.6
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 5.6e-32 140.6 84 79.8
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 9.5e-32 139.8 84 78.6
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 9.5e-32 139.8 84 79.8
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 9.5e-32 139.8 84 77.4
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.2e-31 139.4 84 78.6
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 1.6e-31 139.0 84 77.4
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 1.6e-31 139.0 83 73.5
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 1.6e-31 139.0 84 77.4
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 2.8e-31 138.3 82 79.3
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 3.6e-31 137.9 83 71.1
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 3.6e-31 137.9 84 77.4
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 4.7e-31 137.5 84 76.2
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 6.2e-31 137.1 84 77.4
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 6.2e-31 137.1 84 77.4
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 6.2e-31 137.1 84 77.4
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 1.1e-30 136.3 84 77.4
COL.COLO4_25459 Corchorus olitorius HOM05D000751 ORTHO05D005618 2.3e-30 135.2 100 68.0
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 2.3e-30 135.2 84 77.4
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 3.1e-30 134.8 85 78.8
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 4.0e-30 134.4 82 75.6
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 4.0e-30 134.4 80 80.0
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 5.2e-30 134.0 85 74.1
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 2.0e-29 132.1 84 76.2
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 4.4e-29 131.0 84 73.8
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 4.4e-29 131.0 85 75.3
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 7.5e-29 130.2 85 74.1
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 9.8e-29 129.8 84 71.4
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 1.3e-28 129.4 85 75.3
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 1.3e-28 129.4 85 74.1
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 1.7e-28 129.0 85 74.1
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 1.7e-28 129.0 85 74.1
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 1.7e-28 129.0 85 74.1
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 1.7e-28 129.0 85 74.1
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 1.7e-28 129.0 82 76.8
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 1.7e-28 129.0 119 56.3
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 3.7e-28 127.9 84 70.2
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 1.1e-27 126.3 88 68.2
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 2.4e-27 125.2 84 70.2
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 5.4e-27 124.0 83 68.7
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 7.0e-27 123.6 70 82.9
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 1.2e-26 122.9 84 70.2
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 1.2e-26 122.9 84 64.3
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 4.6e-26 120.9 82 65.9
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 6.0e-26 120.6 84 71.4
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 7.8e-26 120.2 84 64.3
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 3.0e-25 118.2 82 68.3
Sopen07g005100 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-24 116.3 70 81.4
Gorai.003G081200 Gossypium raimondii HOM05D000751 ORTHO05D005618 1.9e-24 115.5 70 77.1
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 5.6e-24 114.0 70 78.6
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 1.6e-23 112.5 84 60.7
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 1.6e-23 112.5 82 58.5
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 3.6e-23 111.3 119 52.1
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 1.1e-22 109.8 82 63.4
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 3.1e-22 108.2 60 85.0
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 6.8e-22 107.1 82 56.1
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 1.2e-21 106.3 82 61.0
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 1.5e-21 105.9 89 62.9
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 4.4e-21 104.4 82 59.8
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 4.9e-20 100.9 68 69.1
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 4.1e-19 97.8 56 75.0
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 2.7e-18 95.1 59 72.9
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 7.8e-18 93.6 84 59.5
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 1.5e-16 89.4 100 41.0
CAN.G101.3 Capsicum annuum HOM05D000751 ORTHO05D005618 5.6e-16 87.4 84 57.1
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 2.8e-15 85.1 59 62.7
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 3.6e-15 84.7 60 65.0
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 8.1e-15 83.6 84 53.6
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 2.4e-14 82.0 84 52.4
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 2.0e-13 79.0 69 47.8
Aqoxy1G02674 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 5.8e-13 77.4 55 63.6
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 1.3e-12 76.3 58 67.2
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 1.2e-10 69.7 81 38.3
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 2.7e-10 68.6 92 39.1
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 5.6e-08 60.8 92 38.0
DCAR_001330 Daucus carota HOM05D000751 ORTHO05D005618 9.0e-06 53.5 60 50.0


User provided reference genes

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