Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 3.9e-41 171.0 86 100.0
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 8.5e-28 126.7 86 74.4
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 1.2e-26 122.9 86 74.4
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 4.7e-26 120.9 86 72.1
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 6.1e-26 120.6 86 70.9
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 1.5e-24 115.9 86 70.9
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 9.7e-24 113.2 88 70.5
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 9.7e-24 113.2 88 69.3
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 9.7e-24 113.2 86 66.3
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 1.7e-23 112.5 86 68.6
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 1.7e-23 112.5 86 68.6
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 2.4e-22 108.6 86 66.3
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 2.4e-22 108.6 86 66.3
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 2.4e-22 108.6 86 66.3
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 2.4e-22 108.6 86 67.4
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 3.1e-22 108.2 86 64.0
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 3.1e-22 108.2 86 67.4
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 4.1e-22 107.8 86 65.1
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 4.1e-22 107.8 86 64.0
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 5.3e-22 107.5 85 64.7
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 7.0e-22 107.1 86 66.3
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 9.1e-22 106.7 86 67.4
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 1.2e-21 106.3 86 62.8
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 1.2e-21 106.3 86 61.6
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 1.6e-21 105.9 86 64.0
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 2.7e-21 105.1 86 62.8
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 2.7e-21 105.1 86 65.1
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 3.5e-21 104.8 87 65.5
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 3.5e-21 104.8 87 65.5
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 3.5e-21 104.8 87 65.5
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 3.5e-21 104.8 87 65.5
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 3.5e-21 104.8 87 65.5
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 3.5e-21 104.8 86 64.0
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 4.5e-21 104.4 86 64.0
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 4.5e-21 104.4 86 62.8
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 7.7e-21 103.6 84 63.1
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 7.7e-21 103.6 86 62.8
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 1.7e-20 102.4 86 59.3
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 1.7e-20 102.4 86 59.3
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 2.2e-20 102.1 86 60.5
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 2.2e-20 102.1 86 66.3
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 2.2e-20 102.1 86 62.8
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 2.2e-20 102.1 85 65.9
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 2.9e-20 101.7 86 64.0
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 3.8e-20 101.3 86 59.3
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 5.0e-20 100.9 86 61.6
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 5.0e-20 100.9 87 64.4
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 5.0e-20 100.9 86 62.8
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 6.5e-20 100.5 86 64.0
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 6.5e-20 100.5 86 59.3
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 8.5e-20 100.1 86 64.0
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 1.1e-19 99.8 86 55.8
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 1.5e-19 99.4 86 60.5
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 1.5e-19 99.4 83 63.9
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 1.9e-19 99.0 86 61.6
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 2.5e-19 98.6 86 57.0
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 2.5e-19 98.6 80 62.5
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 2.5e-19 98.6 86 61.6
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 3.2e-19 98.2 86 55.8
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 3.2e-19 98.2 87 59.8
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 3.2e-19 98.2 86 60.5
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 4.2e-19 97.8 80 63.8
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 5.5e-19 97.4 86 61.6
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 5.5e-19 97.4 86 62.8
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 5.5e-19 97.4 83 59.0
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 5.5e-19 97.4 86 60.5
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 7.2e-19 97.1 86 60.5
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 9.4e-19 96.7 86 55.8
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 1.2e-18 96.3 86 55.8
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 1.2e-18 96.3 86 62.8
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 1.2e-18 96.3 87 58.6
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 2.1e-18 95.5 91 56.0
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 2.7e-18 95.1 85 58.8
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 4.7e-18 94.4 86 61.6
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 6.1e-18 94.0 87 56.3
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 6.1e-18 94.0 83 59.0
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 8.0e-18 93.6 86 61.6
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 8.0e-18 93.6 86 57.0
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 1.0e-17 93.2 86 59.3
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.0e-17 93.2 86 59.3
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 1.0e-17 93.2 82 58.5
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 2.3e-17 92.0 86 55.8
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 2.3e-17 92.0 83 57.8
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 2.3e-17 92.0 86 57.0
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 4.0e-17 91.3 75 61.3
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 8.8e-17 90.1 82 53.7
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 8.8e-17 90.1 88 55.7
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 1.2e-16 89.7 82 53.7
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.5e-16 89.4 86 57.0
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.5e-16 89.4 86 57.0
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 1.5e-16 89.4 86 57.0
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 2.0e-16 89.0 74 60.8
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.0e-16 89.0 85 54.1
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 5.7e-16 87.4 83 56.6
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 7.5e-16 87.0 85 58.8
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.7e-15 85.9 79 57.0
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 3.1e-14 81.6 81 56.8
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 5.4e-14 80.9 91 48.4
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 1.6e-13 79.3 86 48.8
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 2.7e-13 78.6 66 57.6
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 3.5e-13 78.2 89 46.1
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 1.0e-12 76.6 86 51.2
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 1.2e-10 69.7 174 32.8
MBI10_g13399_MAGBIO Magnolia biondii HOM05D006634 ORTHO05D008282 4.7e-10 67.8 48 72.9
PGSC0003DMG400008051 Solanum tuberosum HOM05D006634 ORTHO05D008282 4.0e-09 64.7 66 54.5
Actinidia20457 Actinidia chinensis HOM05D006634 ORTHO05D008282 1.2e-08 63.2 65 52.3
Lj1A192T37 Lonicera japonica HOM05D006634 ORTHO05D008282 5.7e-08 60.8 41 78.0
Mapoly0137s0028 Marchantia polymorpha HOM05D006634 ORTHO05D008282 7.5e-08 60.5 93 39.8
Haze_23828 Corylus avellana HOM05D006634 ORTHO05D008282 1.3e-07 59.7 46 69.6
A04p21560 Brassica napus HOM05D006634 ORTHO05D008282 1.7e-07 59.3 42 64.3
Nitab4.5_0014490g0010 Nicotiana tabacum HOM05D006634 ORTHO05D008282 2.8e-07 58.5 41 73.2
SalBow3G3864 Salvia bowleyana HOM05D006634 ORTHO05D008282 3.7e-07 58.2 89 44.9
Pp3c7_7440 Physcomitrium patens HOM05D006634 ORTHO05D008282 4.9e-07 57.8 91 36.3
HPP92_022576 Vanilla planifolia HOM05D006634 ORTHO05D008282 2.4e-06 55.5 39 69.2
Sc06g0010190 Simmondsia chinensis HOM05D006634 ORTHO05D008282 3.1e-06 55.1 47 66.0
SHI06100 Sapria himalayana HOM05D006634 ORTHO05D008282 4.1e-06 54.7 43 69.8


User provided reference genes

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