Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g10701 Nelumbo nucifera HOM05D005934 ORTHO05D005165 6.2e-106 387.5 200 100.0
TAR636G3344 Trochodendron aralioides HOM05D005934 ORTHO05D005165 5.9e-40 168.3 195 54.9
TAR633G0441 Trochodendron aralioides HOM05D005934 ORTHO05D005165 6.4e-34 148.3 197 50.8
MD07G1177300 Malus domestica HOM05D005934 ORTHO05D005165 5.6e-22 108.6 199 40.2
TWI38G0616 Tripterygium wilfordii HOM05D005934 ORTHO05D005165 6.8e-20 101.7 195 40.0
FvH4_7g19882 Fragaria vesca HOM05D005934 ORTHO05D005165 8.9e-20 101.3 194 39.2
Dinv31355 Davidia involucrata HOM05D005934 ORTHO05D005165 2.0e-19 100.1 188 38.3
FAN03G0840 Fragaria x ananassa HOM05D005934 ORTHO05D005165 2.0e-19 100.1 194 39.2
MD01G1111100 Malus domestica HOM05D005934 ORTHO05D005165 4.4e-19 99.0 196 40.3
Potri.010G219700 Populus trichocarpa HOM05D005934 ORTHO05D005165 5.8e-19 98.6 191 39.3
Haze_16922 Corylus avellana HOM05D005934 ORTHO05D005165 9.9e-19 97.8 129 47.3
Ciclev10031457m.g Citrus clementina HOM05D005934 ORTHO05D005165 1.3e-18 97.4 192 36.5
Cpa.g.sc53.46 Carica papaya HOM05D005934 ORTHO05D005165 2.2e-18 96.7 190 41.6
FAN01G1479 Fragaria x ananassa HOM05D005934 ORTHO05D005165 2.9e-18 96.3 144 43.8
TWI63G0603 Tripterygium wilfordii HOM05D005934 ORTHO05D005165 1.1e-17 94.4 195 39.0
FAN01G0846 Fragaria x ananassa HOM05D005934 ORTHO05D005165 1.4e-17 94.0 193 37.8
QL08p056591 Quercus lobata HOM05D005934 ORTHO05D005165 1.4e-17 94.0 193 34.7
RcHm_v2.0_Chr1g0363881 Rosa chinensis HOM05D005934 ORTHO05D005165 1.4e-17 94.0 196 37.8
GSVIVG01016314001 Vitis vinifera HOM05D005934 ORTHO05D005165 2.4e-17 93.2 144 47.2
Sabra10G0169500 Salix brachista HOM05D005934 ORTHO05D005165 4.1e-17 92.4 192 38.0
Atru.chr12.720 Acer truncatum HOM05D005934 ORTHO05D005165 7.1e-17 91.7 146 45.2
AUR62020763 Chenopodium quinoa HOM05D005934 ORTHO05D005165 1.2e-16 90.9 190 36.8
AUR62027949 Chenopodium quinoa HOM05D005934 ORTHO05D005165 1.2e-16 90.9 190 36.8
FAN10G0472 Fragaria x ananassa HOM05D005934 ORTHO05D005165 3.5e-16 89.4 184 36.4
Hund22503 Selenicereus undatus HOM05D005934 ORTHO05D005165 1.3e-15 87.4 132 46.2
CANSAT56G0550 Cannabis sativa HOM05D005934 ORTHO05D005165 6.6e-15 85.1 138 41.3
Sc09g0006590 Simmondsia chinensis HOM05D005934 ORTHO05D005165 8.6e-15 84.7 192 38.0
EL10Ac2g03586 Beta vulgaris HOM05D005934 ORTHO05D005165 1.5e-14 84.0 183 37.7
Nn2g10702 Nelumbo nucifera HOM05D005934 ORTHO05D005165 3.3e-14 82.8 42 97.6
COL.COLO4_23717 Corchorus olitorius HOM05D005934 ORTHO05D005165 1.2e-13 80.9 187 35.3
vmacro07085 Vaccinium macrocarpon HOM05D005934 ORTHO05D005165 2.1e-13 80.1 110 42.7
Manes.10G044200 Manihot esculenta HOM05D005934 ORTHO05D005165 5.2e-12 75.5 130 41.5
PSO339G5008 Papaver somniferum HOM05D005934 ORTHO05D005165 6.8e-12 75.1 197 35.5
Dinv11795 Davidia involucrata HOM05D005934 ORTHO05D005165 2.0e-11 73.6 183 34.4
PSO541G4936 Papaver somniferum HOM05D005934 ORTHO05D005165 2.6e-11 73.2 197 37.1
CSS0015713 Camellia sinensis var. sinensis HOM05D005934 ORTHO05D005165 3.4e-11 72.8 190 34.7
Duzib114G0889 Durio zibethinus HOM05D005934 ORTHO05D005165 5.8e-11 72.0 188 36.7
Thecc.10G070000 Theobroma cacao HOM05D005934 ORTHO05D005165 5.8e-11 72.0 132 38.6
Actinidia38257 Actinidia chinensis HOM05D005934 ORTHO05D005165 7.6e-11 71.6 206 33.0
PGR142G2623 Punica granatum HOM05D005934 ORTHO05D005165 1.3e-10 70.9 198 33.8
Prupe.2G216000 Prunus persica HOM05D005934 ORTHO05D005165 1.7e-10 70.5 179 37.4
Gorai.009G314800 Gossypium raimondii HOM05D005934 ORTHO05D005165 2.2e-10 70.1 186 34.9
MBI05_g20541_MAGBIO Magnolia biondii HOM05D005934 ORTHO05D005165 6.4e-10 68.6 198 34.3
Gohir.D05G297500 Gossypium hirsutum HOM05D005934 ORTHO05D005165 8.4e-10 68.2 186 34.4
Lsat_1_v5_gn_2_113761 Lactuca sativa HOM05D005934 ORTHO05D005165 1.4e-09 67.4 183 33.9
HanXRQChr11g0323311 Helianthus annuus HOM05D005934 ORTHO05D005165 3.2e-09 66.2 188 31.4
Medtr1g095640 Medicago truncatula HOM05D005934 ORTHO05D005165 5.4e-09 65.5 45 68.9
Ah.11g043450 Amaranthus hybridus HOM05D005934 ORTHO05D005165 9.2e-09 64.7 128 36.7
Gohir.A05G297600 Gossypium hirsutum HOM05D005934 ORTHO05D005165 9.2e-09 64.7 185 35.1
Lj5g0021458 Lotus japonicus HOM05D005934 ORTHO05D005165 9.2e-09 64.7 45 66.7
HanXRQChr14g0457271 Helianthus annuus HOM05D005934 ORTHO05D005165 1.2e-08 64.3 153 35.9
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 1.2e-08 64.3 140 40.0
Gohir.A05G345500 Gossypium hirsutum HOM05D005934 ORTHO05D005165 2.1e-08 63.5 97 41.2
Lalb_Chr02g0141961 Lupinus albus HOM05D005934 ORTHO05D005165 2.7e-08 63.2 190 32.6
ECA238G0735 Erigeron canadensis HOM05D005934 ORTHO05D005165 4.6e-08 62.4 119 37.0
Glyma.20G178100 Glycine max HOM05D005934 ORTHO05D005165 4.6e-08 62.4 136 37.5
Phvul.007G092600 Phaseolus vulgaris HOM05D005934 ORTHO05D005165 1.0e-07 61.2 84 47.6
CSS0026746 Camellia sinensis var. sinensis HOM05D005934 ORTHO05D005165 3.9e-07 59.3 180 35.6
TPR.G1756 Trifolium pratense HOM05D005934 ORTHO05D005165 1.1e-06 57.8 148 31.1
Ca_10584_v3 Cicer arietinum L. HOM05D005934 ORTHO05D005165 1.9e-06 57.0 193 32.1
Gorai.012G094400 Gossypium raimondii HOM05D005934 ORTHO05D005165 1.9e-06 57.0 141 35.5
Gohir.D04G084700 Gossypium hirsutum HOM05D005934 ORTHO05D005165 2.5e-06 56.6 141 35.5
arahy.Tifrunner.gnm1.ann1.W2M3W6 Arachis hypogaea HOM05D005934 ORTHO05D005165 4.3e-06 55.8 186 31.2
Eucgr.G02812 Eucalyptus grandis HOM05D005934 ORTHO05D005165 4.3e-06 55.8 186 30.1
arahy.Tifrunner.gnm1.ann1.H195MC Arachis hypogaea HOM05D005934 ORTHO05D005165 9.6e-06 54.7 186 29.0


User provided reference genes

Program Settings