Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 1.8e-107 392.5 191 100.0
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 7.4e-64 247.7 190 66.3
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 1.6e-63 246.5 160 73.8
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.6e-63 246.5 192 63.0
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 6.2e-63 244.6 142 81.0
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 1.4e-62 243.4 194 64.9
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 4.0e-62 241.9 193 65.8
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 5.3e-62 241.5 199 63.8
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 1.5e-61 240.0 194 65.5
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 2.0e-61 239.6 190 61.6
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 2.0e-61 239.6 199 62.8
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 4.5e-61 238.4 150 74.7
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 5.8e-61 238.0 189 65.1
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 7.6e-61 237.7 165 70.3
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 2.9e-60 235.7 150 73.3
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 4.9e-60 235.0 189 61.9
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 6.4e-60 234.6 137 78.8
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 8.4e-60 234.2 137 80.3
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 8.4e-60 234.2 142 78.2
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 1.1e-59 233.8 151 70.9
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 1.9e-59 233.0 168 67.9
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.4e-59 232.6 188 63.8
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 4.2e-59 231.9 136 78.7
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 7.1e-59 231.1 191 60.7
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 7.1e-59 231.1 198 59.6
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 1.6e-58 229.9 192 63.5
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 1.6e-58 229.9 188 62.8
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.6e-58 229.9 188 62.8
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 3.5e-58 228.8 137 76.6
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 3.5e-58 228.8 137 78.8
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 4.6e-58 228.4 145 74.5
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 7.9e-58 227.6 151 73.5
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 2.3e-57 226.1 183 61.7
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.3e-57 226.1 198 61.1
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 3.0e-57 225.7 196 58.2
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 3.9e-57 225.3 165 67.3
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 5.1e-57 224.9 144 71.5
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 8.7e-57 224.2 144 70.8
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 1.5e-56 223.4 176 63.1
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 3.3e-56 222.2 192 60.4
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 4.3e-56 221.9 192 59.4
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 5.6e-56 221.5 192 60.4
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 5.6e-56 221.5 192 59.9
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 7.4e-56 221.1 137 73.7
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 7.4e-56 221.1 209 56.9
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 9.6e-56 220.7 184 56.5
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 1.3e-55 220.3 191 60.2
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 1.6e-55 219.9 137 73.7
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 1.6e-55 219.9 138 73.2
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 2.1e-55 219.5 184 57.1
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 2.8e-55 219.2 137 73.7
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 2.8e-55 219.2 150 67.3
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 3.7e-55 218.8 156 67.9
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 3.7e-55 218.8 191 58.1
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 3.7e-55 218.8 173 63.0
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 8.1e-55 217.6 137 73.7
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 1.1e-54 217.2 191 59.7
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 1.4e-54 216.9 137 71.5
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 1.4e-54 216.9 191 59.2
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 1.4e-54 216.9 136 75.7
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 1.5e-53 213.4 144 68.1
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 3.4e-53 212.2 139 70.5
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 4.5e-53 211.8 138 71.0
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 5.8e-53 211.5 139 71.9
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 7.6e-53 211.1 149 67.8
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 7.6e-53 211.1 143 69.2
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 1.3e-52 210.3 125 76.8
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 1.3e-52 210.3 133 71.4
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 2.2e-52 209.5 125 75.2
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 2.9e-52 209.1 139 71.2
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 2.9e-52 209.1 144 68.8
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 4.9e-52 208.4 136 71.3
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 6.5e-52 208.0 125 75.2
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 6.5e-52 208.0 125 76.0
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 6.5e-52 208.0 175 57.7
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 6.5e-52 208.0 175 57.7
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 8.4e-52 207.6 126 74.6
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 8.4e-52 207.6 145 64.1
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 1.9e-51 206.5 124 75.0
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 1.9e-51 206.5 124 75.0
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 3.2e-51 205.7 125 75.2
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 5.5e-51 204.9 124 74.2
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 5.5e-51 204.9 124 74.2
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 7.1e-51 204.5 128 71.9
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 7.1e-51 204.5 149 62.4
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 9.3e-51 204.1 126 74.6
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 1.2e-50 203.8 124 74.2
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 1.6e-50 203.4 124 74.2
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.6e-50 203.4 128 71.9
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.3e-49 200.3 175 56.0
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 1.3e-49 200.3 126 71.4
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 2.3e-49 199.5 142 65.5
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 5.1e-49 198.4 238 46.6
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 1.5e-48 196.8 147 62.6
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 3.3e-48 195.7 132 67.4
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 4.3e-48 195.3 136 68.4
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 5.7e-48 194.9 156 60.3
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.1e-46 190.7 140 65.7
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.4e-46 190.3 111 78.4
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 3.4e-45 185.7 225 48.0
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 4.5e-45 185.3 179 50.8
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 7.6e-45 184.5 112 76.8
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 1.9e-43 179.9 182 51.6
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 3.2e-43 179.1 117 70.9
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 1.2e-42 177.2 116 68.1
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 3.6e-42 175.6 116 69.8
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 1.8e-41 173.3 152 63.8
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 6.7e-41 171.4 150 60.0
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 1.3e-39 167.2 122 67.2
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 4.8e-39 165.2 115 68.7
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 8.2e-39 164.5 197 46.2
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 6.9e-38 161.4 103 77.7
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 9.1e-38 161.0 113 69.0
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 1.2e-37 160.6 91 80.2
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 1.5e-37 160.2 92 80.4
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 3.2e-35 152.5 113 57.5
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 6.1e-34 148.3 147 57.1
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 2.3e-33 146.4 101 70.3
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 3.0e-33 146.0 109 63.3
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 3.3e-32 142.5 90 71.1
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 1.8e-30 136.7 109 59.6
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 1.7e-28 130.2 126 49.2
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 3.6e-26 122.5 82 70.7
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 1.4e-25 120.6 73 71.2
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 3.9e-25 119.0 115 51.3
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 8.2e-23 111.3 131 49.6
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 1.6e-21 107.1 74 73.0
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 1.0e-20 104.4 61 77.0
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 2.2e-20 103.2 95 51.6
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 1.1e-19 100.9 111 45.0
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 5.3e-14 82.0 111 38.7
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 7.0e-14 81.6 78 52.6
TAR623G0306 Trochodendron aralioides HOM05D003242 ORTHO05D003593 1.0e-12 77.8 158 34.2
Lsat_1_v5_gn_8_145740 Lactuca sativa HOM05D005244 ORTHO05D006780 2.6e-08 63.2 46 65.2
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 1.3e-07 60.8 37 73.0


User provided reference genes

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