Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g10469 Nelumbo nucifera HOM05D008199 ORTHO05D010334 2.2e-31 138.3 68 100.0
Manes.07G111800 Manihot esculenta HOM05D008199 ORTHO05D010334 3.7e-18 94.4 53 81.1
PGR142G1326 Punica granatum HOM05D008199 ORTHO05D010334 4.8e-18 94.0 52 80.8
Potri.008G051100 Populus trichocarpa HOM05D008199 ORTHO05D010334 8.3e-18 93.2 51 80.4
Sed0003138 Sechium edule HOM05D008199 ORTHO05D010334 1.8e-17 92.0 49 85.7
Dinv31422 Davidia involucrata HOM05D000953 ORTHO05D000231 2.4e-17 91.7 49 81.6
Sc20g0002530 Simmondsia chinensis HOM05D008199 ORTHO05D010334 3.1e-17 91.3 50 82.0
Cpa.g.sc1.358 Carica papaya HOM05D008199 ORTHO05D010334 5.3e-17 90.5 54 79.6
ClCG09G020150 Citrullus lanatus HOM05D008199 ORTHO05D010334 7.0e-17 90.1 52 80.8
TWI38G1458 Tripterygium wilfordii HOM05D008199 ORTHO05D010334 7.0e-17 90.1 54 77.8
TAR633G0052 Trochodendron aralioides HOM05D008199 ORTHO05D010334 9.1e-17 89.7 50 78.0
CSS0014372 Camellia sinensis var. sinensis HOM05D008199 ORTHO05D010334 1.2e-16 89.4 52 75.0
CiPaw.01G282700 Carya illinoinensis HOM05D008199 ORTHO05D010334 1.2e-16 89.4 52 78.8
CARHR134390 Cardamine hirsuta HOM05D008199 ORTHO05D010334 2.7e-16 88.2 52 71.2
MD01G1123400 Malus domestica HOM05D008199 ORTHO05D010334 2.7e-16 88.2 53 73.6
GSVIVG01016602001 Vitis vinifera HOM05D000953 ORTHO05D000231 2.7e-16 88.2 56 71.4
Hma1.2p1_0727F.1_g209100 Hydrangea macrophylla HOM05D008199 ORTHO05D010334 3.5e-16 87.8 53 71.7
RcHm_v2.0_Chr1g0366131 Rosa chinensis HOM05D008199 ORTHO05D010334 3.5e-16 87.8 53 73.6
Prupe.2G230900 Prunus persica HOM05D008199 ORTHO05D010334 1.3e-15 85.9 53 71.7
AL4G36900 Arabidopsis lyrata HOM05D008199 ORTHO05D010334 1.7e-15 85.5 53 66.0
Gohir.A05G350700 Gossypium hirsutum HOM05D008199 ORTHO05D010334 2.2e-15 85.1 51 70.6
Aqoxy5G00469 Aquilegia oxysepala HOM05D008199 ORTHO05D010334 2.9e-15 84.7 48 79.2
AL4G36920 Arabidopsis lyrata HOM05D008199 ORTHO05D010334 2.9e-15 84.7 52 67.3
Gorai.012G069200 Gossypium raimondii HOM05D008199 ORTHO05D010334 2.9e-15 84.7 51 70.6
Atru.chr12.520 Acer truncatum HOM05D008199 ORTHO05D010334 3.8e-15 84.3 48 79.2
AT2G39500 Arabidopsis thaliana HOM05D008199 ORTHO05D010334 3.8e-15 84.3 52 65.4
CANSAT11G0099 Cannabis sativa HOM05D008199 ORTHO05D010334 3.8e-15 84.3 50 76.0
ECA238G2613 Erigeron canadensis HOM05D008199 ORTHO05D010334 3.8e-15 84.3 48 75.0
Gohir.D04G061900 Gossypium hirsutum HOM05D008199 ORTHO05D010334 3.8e-15 84.3 49 73.5
Medtr1g115355 Medicago truncatula HOM05D008199 ORTHO05D010334 3.8e-15 84.3 49 75.5
Cfa001517 Carpinus fangiana HOM05D008199 ORTHO05D010334 5.0e-15 84.0 43 86.0
Actinidia07733 Actinidia chinensis HOM05D008199 ORTHO05D010334 1.1e-14 82.8 50 74.0
Actinidia34336 Actinidia chinensis HOM05D008199 ORTHO05D010334 1.1e-14 82.8 50 74.0
Carub.0004s2158 Capsella rubella HOM05D008199 ORTHO05D010334 1.1e-14 82.8 50 70.0
Lsat_1_v5_gn_2_117560 Lactuca sativa HOM05D008199 ORTHO05D010334 1.1e-14 82.8 55 69.1
Lj5g0016979 Lotus japonicus HOM05D008199 ORTHO05D010334 1.1e-14 82.8 52 71.2
PGSC0003DMG400029465 Solanum tuberosum HOM05D008199 ORTHO05D010334 1.1e-14 82.8 49 79.6
THA.LOC104824262 Tarenaya hassleriana HOM05D008199 ORTHO05D010334 1.1e-14 82.8 57 68.4
BcaC02g12078 Brassica carinata HOM05D008199 ORTHO05D010334 1.5e-14 82.4 50 68.0
A05p06880 Brassica napus HOM05D008199 ORTHO05D010334 1.5e-14 82.4 50 68.0
BraA05t19653Z Brassica rapa HOM05D008199 ORTHO05D010334 1.5e-14 82.4 50 68.0
Thecc.10G048500 Theobroma cacao HOM05D008199 ORTHO05D010334 1.9e-14 82.0 44 81.8
Actinidia02971 Actinidia chinensis HOM05D008199 ORTHO05D010334 2.5e-14 81.6 54 70.4
C04p08150 Brassica napus HOM05D008199 ORTHO05D010334 2.5e-14 81.6 50 68.0
BolC4t22425H Brassica oleracea HOM05D008199 ORTHO05D010334 2.5e-14 81.6 50 68.0
CAN.G74.25 Capsicum annuum HOM05D008199 ORTHO05D010334 3.2e-14 81.3 49 75.5
Oeu021440.1 Olea europaea HOM05D008199 ORTHO05D010334 3.2e-14 81.3 49 71.4
Glyma.20G099000 Glycine max HOM05D008199 ORTHO05D010334 4.2e-14 80.9 52 71.2
Aa31LG5G20100 Aethionema arabicum HOM05D008199 ORTHO05D010334 5.5e-14 80.5 51 66.7
DCAR_027672 Daucus carota HOM05D008199 ORTHO05D010334 7.2e-14 80.1 47 74.5
Manes.10G036000 Manihot esculenta HOM05D008199 ORTHO05D010334 7.2e-14 80.1 41 85.4
Sp4g21800 Schrenkiella parvula HOM05D008199 ORTHO05D010334 7.2e-14 80.1 50 64.0
Migut.F01496 Erythranthe guttata HOM05D008199 ORTHO05D010334 1.2e-13 79.3 49 71.4
Lalb_Chr02g0144051 Lupinus albus HOM05D008199 ORTHO05D010334 1.6e-13 79.0 53 66.0
Ciclev10033682m.g Citrus clementina HOM05D008199 ORTHO05D010334 2.1e-13 78.6 39 89.7
Psat6g236360 Pisum sativum HOM05D008199 ORTHO05D010334 2.1e-13 78.6 42 81.0
PSO339G4122 Papaver somniferum HOM05D008199 ORTHO05D010334 3.6e-13 77.8 47 72.3
COL.COLO4_14948 Corchorus olitorius HOM05D008199 ORTHO05D010334 8.0e-13 76.6 48 66.7
MBI05_g35603_MAGBIO Magnolia biondii HOM05D008199 ORTHO05D010334 2.3e-12 75.1 67 55.2
Phvul.007G011200 Phaseolus vulgaris HOM05D008199 ORTHO05D010334 5.2e-12 73.9 43 72.1
SEGI_29944 Sequoiadendron giganteum HOM05D008199 ORTHO05D010334 2.0e-11 72.0 49 63.3
Zm00001eb362160 Zea mays HOM05D008199 ORTHO05D010334 4.4e-11 70.9 53 56.6
Duzib128G0439 Durio zibethinus HOM05D008199 ORTHO05D010334 6.3e-10 67.0 50 60.0
SHI12594 Sapria himalayana HOM05D008199 ORTHO05D010334 1.6e-08 62.4 68 45.6
HanXRQChr16g0507891 Helianthus annuus HOM05D008199 ORTHO05D010334 5.9e-08 60.5 52 55.8
Pp3c9_50 Physcomitrium patens HOM05D008199 ORTHO05D010334 1.1e-06 56.2 38 60.5


User provided reference genes

Program Settings