Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 2.0e-169 599.0 298 100.0
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 1.4e-138 496.5 298 85.2
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 1.7e-115 419.9 301 71.8
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 4.9e-115 418.3 304 71.1
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 4.0e-109 398.7 311 69.8
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 9.0e-109 397.5 308 68.2
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 5.8e-108 394.8 305 66.9
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 4.2e-106 388.7 305 69.5
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 4.0e-101 372.1 304 68.4
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 6.9e-101 371.3 307 64.5
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 5.8e-100 368.2 340 62.1
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 1.4e-98 363.6 314 65.0
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 3.2e-98 362.5 276 67.8
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 4.2e-98 362.1 334 62.0
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 5.1e-96 355.1 301 64.5
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 4.3e-95 352.1 308 64.3
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 1.6e-94 350.1 306 65.0
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 2.1e-94 349.7 312 64.1
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 6.2e-94 348.2 305 62.3
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 1.1e-93 347.4 309 62.5
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 2.4e-93 346.3 301 64.5
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 3.1e-93 345.9 310 63.5
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 5.3e-93 345.1 312 63.5
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 6.9e-93 344.7 301 63.5
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 9.0e-93 344.4 303 61.4
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 1.2e-92 344.0 308 62.7
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 1.5e-92 343.6 301 62.8
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 2.0e-92 343.2 312 64.1
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 7.6e-92 341.3 302 62.3
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 3.8e-91 339.0 306 63.4
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 4.9e-91 338.6 309 62.8
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 8.4e-91 337.8 294 65.0
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 2.5e-90 336.3 336 57.1
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 5.5e-90 335.1 296 61.1
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 1.2e-89 334.0 305 60.0
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 1.2e-89 334.0 313 62.0
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 2.1e-89 333.2 296 61.1
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 2.1e-89 333.2 323 60.4
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 3.5e-89 332.4 300 61.0
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 6.0e-89 331.6 296 60.8
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 1.8e-88 330.1 294 62.9
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 7.4e-87 324.7 301 58.5
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 9.6e-87 324.3 312 59.9
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 1.3e-86 323.9 294 63.9
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 1.4e-85 320.5 312 59.3
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 1.4e-85 320.5 313 58.1
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 5.3e-85 318.5 296 59.5
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 5.3e-85 318.5 296 59.5
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 2.6e-84 316.2 310 60.3
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 2.6e-84 316.2 310 59.7
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 4.5e-84 315.5 275 61.1
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 2.2e-83 313.2 309 60.5
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 2.9e-83 312.8 286 60.8
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 1.1e-82 310.8 301 57.8
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 1.4e-82 310.5 302 57.3
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 1.4e-82 310.5 304 59.2
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 2.3e-80 303.1 298 59.1
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 1.9e-79 300.1 331 54.1
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 2.5e-79 299.7 313 59.4
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 7.4e-79 298.1 286 61.2
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 1.3e-78 297.4 292 58.9
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 4.8e-78 295.4 304 55.3
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 2.4e-77 293.1 267 61.8
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.4e-77 293.1 320 57.5
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 9.0e-77 291.2 293 59.0
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 1.2e-76 290.8 322 55.0
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 1.0e-75 287.7 288 58.3
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 2.2e-75 286.6 301 56.5
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.2e-75 286.6 292 58.2
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 2.2e-75 286.6 307 55.7
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 3.8e-75 285.8 308 54.5
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 3.8e-75 285.8 294 56.8
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 3.8e-75 285.8 295 56.9
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 8.5e-75 284.6 288 57.6
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 2.5e-74 283.1 291 56.4
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 5.5e-74 282.0 298 54.4
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 7.2e-74 281.6 293 56.3
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 1.8e-72 276.9 294 54.8
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 1.8e-72 276.9 283 58.0
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 8.8e-72 274.6 356 49.7
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 1.5e-71 273.9 346 48.6
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 3.7e-70 269.2 339 49.9
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 1.2e-68 264.2 293 53.6
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 2.0e-68 263.5 205 66.8
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 1.9e-66 256.9 388 43.3
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 6.1e-65 251.9 316 51.6
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 3.0e-64 249.6 301 49.5
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 3.7e-62 242.7 277 49.5
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 1.3e-59 234.2 128 85.9
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 8.0e-57 224.9 254 54.7
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 1.3e-54 217.6 283 48.1
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 8.2e-54 214.9 275 46.5
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 9.1e-53 211.5 108 88.0
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 1.1e-50 204.5 107 88.8
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 8.0e-49 198.4 108 85.2
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 6.3e-46 188.7 98 87.8
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 1.1e-45 188.0 236 47.5
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 3.1e-45 186.4 120 71.7
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.2e-43 180.3 98 86.7
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 1.1e-42 177.9 98 83.7
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 5.5e-42 175.6 129 70.5
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 9.5e-42 174.9 95 83.2
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 1.6e-41 174.1 127 63.0
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 2.1e-41 173.7 210 50.5
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 2.2e-38 163.7 120 64.2
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 3.5e-36 156.4 98 77.6
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 1.1e-34 151.4 98 71.4
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 4.4e-31 139.4 223 46.2
CDE02G2228 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 7.3e-26 122.1 125 52.8
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 5.2e-24 115.9 199 45.7
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 3.4e-23 113.2 204 41.7
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.7e-14 84.3 194 38.1
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.9e-14 83.6 192 38.0
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 2.9e-14 83.6 82 56.1
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 2.4e-13 80.5 89 53.9
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 3.2e-13 80.1 89 53.9
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 3.2e-13 80.1 89 53.9
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 4.1e-13 79.7 100 51.0
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 5.4e-13 79.3 41 87.8
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.0e-11 75.1 190 34.2
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 1.5e-10 71.2 44 75.0
ATR0582G220 Amborella trichopoda HOM05D000182 ORTHO05D000112 5.6e-10 69.3 118 47.5
ATR0752G168 Amborella trichopoda HOM05D000182 ORTHO05D007352 2.8e-09 67.0 106 49.1
SEGI_28384 Sequoiadendron giganteum HOM05D001439 ORTHO05D017116 6.2e-09 65.9 112 42.0
ATR0629G084 Amborella trichopoda HOM05D000182 ORTHO05D007352 1.1e-08 65.1 108 47.2
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 1.2e-07 61.6 143 35.0
Lsat_1_v5_gn_5_23780 Lactuca sativa HOM05D004869 ORTHO05D005893 5.8e-07 59.3 104 42.3
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea HOM05D001890 ORTHO05D003442 7.6e-07 58.9 110 37.3
ATR1132G091 Amborella trichopoda HOM05D000182 ORTHO05D007352 1.7e-06 57.8 104 46.2


User provided reference genes

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