Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 4.8e-272 940.6 504 100.0
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 4.7e-211 738.0 504 79.0
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 2.3e-197 692.6 500 75.4
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 8.7e-197 690.6 498 72.7
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 3.3e-196 688.7 501 73.1
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 2.1e-195 686.0 496 74.0
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 6.9e-194 681.0 505 73.1
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 2.6e-193 679.1 500 74.0
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 4.5e-193 678.3 504 72.8
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 3.8e-192 675.2 505 72.7
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 2.7e-190 669.1 499 71.1
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 6.0e-190 667.9 500 71.4
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 1.8e-189 666.4 499 71.1
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 3.0e-189 665.6 509 70.9
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 6.7e-189 664.5 491 72.7
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 6.7e-189 664.5 505 71.3
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 1.1e-188 663.7 566 67.0
PSO170G5674 Papaver somniferum HOM05D006817 ORTHO05D008603 9.6e-188 660.6 504 70.6
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 1.3e-187 660.2 494 71.3
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 4.5e-185 651.7 498 70.7
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 5.8e-185 651.4 494 71.1
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 2.2e-184 649.4 494 70.4
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 3.8e-184 648.7 495 72.3
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 1.1e-183 647.1 502 70.7
CDE04G2280 Ceratophyllum demersum HOM05D006817 ORTHO05D008603 2.4e-183 646.0 501 69.1
THA.LOC104816518 Tarenaya hassleriana HOM05D006817 ORTHO05D008603 4.2e-183 645.2 495 68.7
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 5.5e-183 644.8 495 70.7
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 2.1e-182 642.9 493 70.0
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 2.1e-182 642.9 490 70.8
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 6.0e-182 641.3 499 67.9
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 6.0e-182 641.3 499 68.9
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 7.9e-182 641.0 505 69.9
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 2.3e-181 639.4 499 70.5
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 6.7e-181 637.9 500 69.0
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 1.1e-180 637.1 500 68.6
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 3.3e-180 635.6 512 68.8
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 5.6e-180 634.8 500 68.6
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 7.4e-180 634.4 494 70.9
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 1.3e-179 633.6 500 68.2
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 1.6e-179 633.3 503 67.6
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 6.2e-179 631.3 503 68.2
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 8.1e-179 630.9 494 69.2
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 1.4e-178 630.2 511 67.1
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 1.2e-177 627.1 494 69.0
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 2.0e-177 626.3 493 67.5
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 2.0e-177 626.3 497 68.4
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 2.0e-177 626.3 477 71.7
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 1.0e-176 624.0 493 68.0
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 2.9e-176 622.5 499 67.1
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 3.8e-176 622.1 494 69.6
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 6.5e-176 621.3 493 67.3
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 1.1e-175 620.5 494 68.8
EL10Ac2g04256 Beta vulgaris HOM05D006817 ORTHO05D008603 1.9e-175 619.8 498 67.7
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 1.9e-175 619.8 498 67.1
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 1.9e-175 619.8 503 67.2
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 5.5e-175 618.2 504 71.2
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 3.3e-172 609.0 520 64.6
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 7.4e-172 607.8 494 68.0
HPP92_019064 Vanilla planifolia HOM05D006817 ORTHO05D008603 1.6e-171 606.7 496 67.1
PSO017G6024 Papaver somniferum HOM05D006817 ORTHO05D008603 6.3e-171 604.7 458 72.3
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 1.1e-170 604.0 504 65.7
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 9.0e-170 600.9 502 65.5
Lsat_1_v5_gn_9_59361 Lactuca sativa HOM05D006817 ORTHO05D008603 4.5e-169 598.6 501 65.7
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 1.3e-168 597.0 497 66.6
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 8.5e-168 594.3 507 63.5
Cfa001223 Carpinus fangiana HOM05D006817 ORTHO05D008603 3.6e-166 589.0 435 74.9
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 8.2e-163 577.8 502 63.7
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 5.9e-161 571.6 495 63.0
Haze_17339 Corylus avellana HOM05D006817 ORTHO05D008603 3.8e-160 568.9 471 68.6
Zm00001eb406320 Zea mays HOM05D006817 ORTHO05D008603 1.2e-158 563.9 500 62.0
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 1.4e-157 560.5 548 59.3
HanXRQChr15g0493791 Helianthus annuus HOM05D006817 ORTHO05D008603 1.8e-157 560.1 474 65.2
QL08p064576 Quercus lobata HOM05D006817 ORTHO05D008603 2.3e-157 559.7 459 68.0
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 6.9e-154 548.1 482 64.5
HanXRQChr08g0222561 Helianthus annuus HOM05D006817 ORTHO05D008603 1.0e-152 544.3 514 60.3
Lj8A57G58 Lonicera japonica HOM05D006817 ORTHO05D008603 1.3e-152 543.9 409 72.9
AUR62003430 Chenopodium quinoa HOM05D006817 ORTHO05D008603 5.0e-152 542.0 531 58.0
FAN01G1353 Fragaria x ananassa HOM05D006817 ORTHO05D008603 6.1e-150 535.0 453 65.6
FAN10G2384 Fragaria x ananassa HOM05D006817 ORTHO05D008603 6.7e-149 531.6 449 65.7
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 4.4e-148 528.9 502 60.6
AUR62012358 Chenopodium quinoa HOM05D006817 ORTHO05D008603 2.2e-147 526.6 470 62.1
Aa31LG11G6330 Aethionema arabicum HOM05D006817 ORTHO05D008603 1.8e-146 523.5 500 60.0
CiPaw.02G198400 Carya illinoinensis HOM05D006817 ORTHO05D008603 1.8e-146 523.5 407 71.3
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 5.9e-145 518.5 470 61.7
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 1.6e-142 510.4 443 64.8
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 6.8e-133 478.4 377 67.1
AT5G05310 Arabidopsis thaliana HOM05D006817 ORTHO05D008603 7.0e-122 441.8 332 70.2
MD07G1231900 Malus domestica HOM05D006817 ORTHO05D008603 7.3e-119 431.8 361 68.7
AUR62031486 Chenopodium quinoa HOM05D006817 ORTHO05D008603 1.3e-107 394.4 501 49.7
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 4.9e-99 365.9 440 49.8
Pp3c22_2490 Physcomitrium patens HOM05D006817 ORTHO05D008603 7.1e-98 362.1 489 45.8
Ca_12776_v3 Cicer arietinum L. HOM05D006817 ORTHO05D008603 3.0e-96 356.7 298 68.5
Carub.0006s0424 Capsella rubella HOM05D006817 ORTHO05D008603 2.8e-94 350.1 289 65.1
RcHm_v2.0_Chr1g0371891 Rosa chinensis HOM05D006817 ORTHO05D008603 2.4e-85 320.5 272 65.8
Nitab4.5_0000109g0530 Nicotiana tabacum HOM05D006817 ORTHO05D008603 2.2e-75 287.3 237 64.1
VMungo0647G0362 Vigna mungo HOM05D006817 ORTHO05D008603 4.2e-74 283.1 249 66.3
SEGI_05100 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 6.7e-72 275.8 214 65.0
RcHm_v2.0_Chr1g0371881 Rosa chinensis HOM05D006817 ORTHO05D008603 1.3e-64 251.5 171 74.9
MD05G1328700 Malus domestica HOM05D006817 ORTHO05D008603 3.0e-64 250.4 245 62.9
VMungo0647G0650 Vigna mungo HOM05D006817 ORTHO05D008603 6.9e-61 239.2 211 62.6
MSTRG.24128 Avicennia marina HOM05D006817 ORTHO05D008603 4.2e-58 229.9 153 75.8
QL10p038395 Quercus lobata HOM05D006817 ORTHO05D008603 5.0e-51 206.5 184 64.1
MD07G1231800 Malus domestica HOM05D006817 ORTHO05D008603 6.5e-51 206.1 156 66.7
Oeu020109.1 Olea europaea HOM05D006817 ORTHO05D008603 5.0e-43 179.9 144 64.6
QL05p063879 Quercus lobata HOM05D006817 ORTHO05D008603 7.4e-39 166.0 147 64.6
SEGI_41528 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 3.7e-38 163.7 164 56.1
Cre08.g361000 Chlamydomonas reinhardtii HOM05D006817 ORTHO05D008603 1.8e-32 144.8 502 29.1
QL03p030054 Quercus lobata HOM05D006817 ORTHO05D008603 2.8e-30 137.5 93 81.7
QL06p040335 Quercus lobata HOM05D006817 ORTHO05D008603 5.3e-29 133.3 108 71.3
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 8.5e-27 125.9 108 68.5
FvH4_7g25690 Fragaria vesca HOM05D006817 ORTHO05D008603 2.1e-25 121.3 87 71.3
Hund15836 Selenicereus undatus HOM05D006817 ORTHO05D008603 1.2e-23 115.5 72 80.6
FAN06G4794 Fragaria x ananassa HOM05D006817 ORTHO05D008603 9.1e-21 105.9 74 71.6
Os11g0112900 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 1.6e-20 105.1 98 60.2
QL10p065865 Quercus lobata HOM05D006817 ORTHO05D008603 2.9e-19 100.9 89 66.3
QL08p064573 Quercus lobata HOM05D006817 ORTHO05D008603 2.5e-18 97.8 63 73.0
MD17G1183400 Malus domestica HOM05D006817 ORTHO05D008603 1.4e-13 82.0 57 73.7
FAN06G1140 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.4e-13 81.3 57 73.7
Prupe.2G262300 Prunus persica HOM05D006817 ORTHO05D008603 1.2e-07 62.4 88 47.7
PGSC0003DMG400024308 Solanum tuberosum HOM05D006817 ORTHO05D008603 8.3e-06 56.2 42 59.5


User provided reference genes

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