Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g10213 Nelumbo nucifera HOM05D000462 ORTHO05D002607 2.7e-49 198.4 101 100.0
Nn4g22727 Nelumbo nucifera HOM05D000462 ORTHO05D002607 1.6e-09 66.2 35 94.3
Nn3g16830 Nelumbo nucifera HOM05D000462 ORTHO05D002607 3.6e-09 65.1 35 88.6
TAR622G0003 Trochodendron aralioides HOM05D000462 ORTHO05D002607 3.6e-09 65.1 35 82.9
Dinv38577 Davidia involucrata HOM05D000462 ORTHO05D002607 4.7e-09 64.7 35 85.7
MBI10_g28001_MAGBIO Magnolia biondii HOM05D000462 ORTHO05D002607 4.7e-09 64.7 35 82.9
TAR374G0660 Trochodendron aralioides HOM05D000462 ORTHO05D002607 8.0e-09 63.9 35 85.7
MSTRG.23136 Avicennia marina HOM05D000462 ORTHO05D002607 1.0e-08 63.5 49 65.3
Ca_16167_v3 Cicer arietinum L. HOM05D000462 ORTHO05D002607 1.0e-08 63.5 45 73.3
CiPaw.12G027600 Carya illinoinensis HOM05D000462 ORTHO05D002607 1.4e-08 63.2 42 71.4
CSS0038693 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D002607 1.8e-08 62.8 35 82.9
Psat0ss3962g0320 Pisum sativum HOM05D000462 ORTHO05D002607 1.8e-08 62.8 45 71.1
HPP92_009706 Vanilla planifolia HOM05D000462 ORTHO05D002607 3.0e-08 62.0 34 82.4
GSVIVG01007730001 Vitis vinifera HOM05D000462 ORTHO05D002607 3.0e-08 62.0 35 80.0
Oeu040836.1 Olea europaea HOM05D000462 ORTHO05D002607 4.0e-08 61.6 35 77.1
Cfa019146 Carpinus fangiana HOM05D000462 ORTHO05D002607 5.2e-08 61.2 35 80.0
Dinv20642 Davidia involucrata HOM05D000462 ORTHO05D002607 5.2e-08 61.2 40 75.0
Medtr3g077640 Medicago truncatula HOM05D000462 ORTHO05D002607 5.2e-08 61.2 44 70.5
Oeu035999.1 Olea europaea HOM05D000462 ORTHO05D002607 5.2e-08 61.2 35 80.0
Prupe.5G172100 Prunus persica HOM05D000462 ORTHO05D002607 5.2e-08 61.2 35 80.0
Atru.chr9.2490 Acer truncatum HOM05D000462 ORTHO05D002607 6.7e-08 60.8 35 80.0
Manes.06G105900 Manihot esculenta HOM05D000462 ORTHO05D002607 6.7e-08 60.8 35 80.0
TAR629G1641 Trochodendron aralioides HOM05D000462 ORTHO05D002607 6.7e-08 60.8 35 74.3
unitig_0.g796 Utricularia gibba HOM05D000462 ORTHO05D002607 6.7e-08 60.8 35 77.1
Migut.D01943 Erythranthe guttata HOM05D000462 ORTHO05D002607 8.8e-08 60.5 35 80.0
SGA_v2.0_scaffold114G31827 Striga asiatica HOM05D000462 ORTHO05D002607 8.8e-08 60.5 35 77.1
SGA_v2.0_scaffold7G04143 Striga asiatica HOM05D000462 ORTHO05D002607 8.8e-08 60.5 35 80.0
HPP92_024707 Vanilla planifolia HOM05D000462 ORTHO05D002607 8.8e-08 60.5 34 82.4
Duzib068G1149 Durio zibethinus HOM05D000462 ORTHO05D002607 1.5e-07 59.7 35 77.1
Gohir.D12G275400 Gossypium hirsutum HOM05D000462 ORTHO05D002607 1.5e-07 59.7 35 77.1
Gorai.008G295900 Gossypium raimondii HOM05D000462 ORTHO05D002607 1.5e-07 59.7 35 77.1
PGR044G2621 Punica granatum HOM05D000462 ORTHO05D002607 1.5e-07 59.7 38 73.7
PGSC0003DMG400018150 Solanum tuberosum HOM05D000462 ORTHO05D002607 1.5e-07 59.7 35 74.3
ATR1091G082 Amborella trichopoda HOM05D000462 ORTHO05D002607 2.0e-07 59.3 33 81.8
CAN.G1305.33 Capsicum annuum HOM05D000462 ORTHO05D002607 2.0e-07 59.3 35 74.3
Gohir.A07G063200 Gossypium hirsutum HOM05D000462 ORTHO05D002607 2.0e-07 59.3 35 74.3
Gohir.D07G067900 Gossypium hirsutum HOM05D000462 ORTHO05D002607 2.0e-07 59.3 35 74.3
Gorai.001G071400 Gossypium raimondii HOM05D000462 ORTHO05D002607 2.0e-07 59.3 35 74.3
Hma1.2p1_0592F.1_g185410 Hydrangea macrophylla HOM05D000462 ORTHO05D002607 2.0e-07 59.3 35 77.1
Lalb_Chr08g0236571 Lupinus albus HOM05D000462 ORTHO05D002607 2.0e-07 59.3 34 79.4
Oeu034067.3 Olea europaea HOM05D000462 ORTHO05D002607 2.0e-07 59.3 35 77.1
QL10p011085 Quercus lobata HOM05D000462 ORTHO05D002607 2.0e-07 59.3 45 64.4
Sopen03g031950 Solanum pennellii HOM05D000462 ORTHO05D002607 2.0e-07 59.3 35 74.3
TPR.G25317 Trifolium pratense HOM05D000462 ORTHO05D002607 2.0e-07 59.3 44 68.2
CANSAT80G1497 Cannabis sativa HOM05D000462 ORTHO05D002607 2.6e-07 58.9 35 77.1
Manes.14G064800 Manihot esculenta HOM05D000462 ORTHO05D002607 2.6e-07 58.9 35 74.3
Solyc03g112870.3 Solanum lycopersicum HOM05D000462 ORTHO05D002607 2.6e-07 58.9 35 71.4
Nitab4.5_0002403g0090 Nicotiana tabacum HOM05D000462 ORTHO05D002607 3.3e-07 58.5 35 74.3
vmacro16615 Vaccinium macrocarpon HOM05D000462 ORTHO05D002607 3.3e-07 58.5 35 74.3
CDE12G0842 Ceratophyllum demersum HOM05D000462 ORTHO05D002607 4.4e-07 58.2 34 76.5
Haze_07512 Corylus avellana HOM05D000462 ORTHO05D002607 5.7e-07 57.8 35 74.3
Lalb_Chr23g0273271 Lupinus albus HOM05D000462 ORTHO05D002607 5.7e-07 57.8 31 83.9
Nitab4.5_0001724g0010 Nicotiana tabacum HOM05D000462 ORTHO05D002607 5.7e-07 57.8 35 71.4
QL10p010673 Quercus lobata HOM05D000462 ORTHO05D002607 5.7e-07 57.8 35 74.3
Rhsim12G0165000 Rhododendron simsii HOM05D000462 ORTHO05D002607 5.7e-07 57.8 34 73.5
arahy.Tifrunner.gnm1.ann1.9ZWK3I Arachis hypogaea HOM05D000462 ORTHO05D002607 7.5e-07 57.4 35 71.4
arahy.Tifrunner.gnm1.ann1.FIBC9W Arachis hypogaea HOM05D000462 ORTHO05D002607 7.5e-07 57.4 35 71.4
Glyma.17G088500 Glycine max HOM05D000462 ORTHO05D002607 7.5e-07 57.4 45 60.0
Hund02749 Selenicereus undatus HOM05D000462 ORTHO05D002607 7.5e-07 57.4 35 71.4
THA.LOC104808313 Tarenaya hassleriana HOM05D000462 ORTHO05D002607 7.5e-07 57.4 35 74.3
TWI14G1248 Tripterygium wilfordii HOM05D000462 ORTHO05D002607 7.5e-07 57.4 35 77.1
Actinidia19101 Actinidia chinensis HOM05D000462 ORTHO05D002607 9.7e-07 57.0 35 74.3
CSS0025053 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D002607 9.7e-07 57.0 35 74.3
FvH4_5g05430 Fragaria vesca HOM05D000462 ORTHO05D002607 9.7e-07 57.0 61 55.7
FAN13G2525 Fragaria x ananassa HOM05D000462 ORTHO05D002607 9.7e-07 57.0 61 55.7
FAN18G4045 Fragaria x ananassa HOM05D000462 ORTHO05D002607 9.7e-07 57.0 61 55.7
FAN18G4327 Fragaria x ananassa HOM05D000462 ORTHO05D002607 9.7e-07 57.0 61 55.7
Nitab4.5_0000025g0550 Nicotiana tabacum HOM05D000462 ORTHO05D002607 9.7e-07 57.0 35 71.4
PSO017G5517 Papaver somniferum HOM05D000462 ORTHO05D002607 9.7e-07 57.0 31 80.6
PSO478G2472 Papaver somniferum HOM05D000462 ORTHO05D002607 9.7e-07 57.0 31 80.6
PRCOL_00002692 Prasinoderma coloniale HOM05D000462 ORTHO05D002607 9.7e-07 57.0 34 73.5
vmacro19396 Vaccinium macrocarpon HOM05D000462 ORTHO05D002607 9.7e-07 57.0 49 59.2
Lsat_1_v5_gn_5_14941 Lactuca sativa HOM05D000462 ORTHO05D002607 1.3e-06 56.6 34 67.6
Lj1g0001520 Lotus japonicus HOM05D000462 ORTHO05D002607 1.3e-06 56.6 31 80.6
Peaxi162Scf00089g01842 Petunia axillaris HOM05D000462 ORTHO05D002607 1.3e-06 56.6 33 75.8
Potri.015G077900 Populus trichocarpa HOM05D000462 ORTHO05D002607 1.3e-06 56.6 35 71.4
Rhsim08G0173600 Rhododendron simsii HOM05D000462 ORTHO05D002607 1.3e-06 56.6 35 71.4
RcHm_v2.0_Chr7g0193401 Rosa chinensis HOM05D000462 ORTHO05D002607 1.3e-06 56.6 59 54.2
Sc12g0005260 Simmondsia chinensis HOM05D000462 ORTHO05D002607 1.3e-06 56.6 35 71.4
Thecc.03G013900 Theobroma cacao HOM05D000462 ORTHO05D002607 1.3e-06 56.6 35 71.4
unitig_60.g25800 Utricularia gibba HOM05D000462 ORTHO05D002607 1.3e-06 56.6 35 74.3
CiPaw.11G024900 Carya illinoinensis HOM05D000462 ORTHO05D002607 1.7e-06 56.2 35 74.3
Dinv35087 Davidia involucrata HOM05D000462 ORTHO05D002607 1.7e-06 56.2 35 71.4
HanXRQChr05g0149571 Helianthus annuus HOM05D000462 ORTHO05D002607 1.7e-06 56.2 34 67.6
Lj9C447T2 Lonicera japonica HOM05D000462 ORTHO05D002607 1.7e-06 56.2 34 73.5
AagrBONN_evm.TU.Sc2ySwM_228.106 Anthoceros agrestis HOM05D000462 ORTHO05D002607 2.2e-06 55.8 35 68.6
HanXRQChr05g0155751 Helianthus annuus HOM05D000462 ORTHO05D002607 2.2e-06 55.8 32 71.9
Phvul.009G177600 Phaseolus vulgaris HOM05D000462 ORTHO05D002607 2.2e-06 55.8 33 72.7
FAN04G1295 Fragaria x ananassa HOM05D000462 ORTHO05D002607 2.8e-06 55.5 59 55.9
Potri.012G082100 Populus trichocarpa HOM05D000462 ORTHO05D002607 2.8e-06 55.5 35 71.4
PGR083G2768 Punica granatum HOM05D000462 ORTHO05D002607 2.8e-06 55.5 35 71.4
VMungo1309G2349 Vigna mungo HOM05D000462 ORTHO05D002607 2.8e-06 55.5 30 83.3
Aqoxy3G01084 Aquilegia oxysepala HOM05D000462 ORTHO05D002607 3.7e-06 55.1 35 68.6
Cpa.g.sc76.37 Carica papaya HOM05D000462 ORTHO05D002607 3.7e-06 55.1 35 68.6
Eucgr.K02835 Eucalyptus grandis HOM05D000462 ORTHO05D002607 3.7e-06 55.1 35 71.4
FAN14G0618 Fragaria x ananassa HOM05D003958 ORTHO05D004864 3.7e-06 55.1 35 65.7
Gohir.A12G274700 Gossypium hirsutum HOM05D000462 ORTHO05D002607 3.7e-06 55.1 35 71.4
Nitab4.5_0000514g0110 Nicotiana tabacum HOM05D000462 ORTHO05D002607 3.7e-06 55.1 35 68.6
Peaxi162Scf00255g01119 Petunia axillaris HOM05D000462 ORTHO05D002607 3.7e-06 55.1 38 65.8
arahy.Tifrunner.gnm1.ann1.QY9S03 Arachis hypogaea HOM05D000462 ORTHO05D002607 4.8e-06 54.7 64 50.0
Cc04_g14240 Coffea canephora HOM05D000462 ORTHO05D002607 4.8e-06 54.7 32 71.9
COL.COLO4_30062 Corchorus olitorius HOM05D000462 ORTHO05D002607 4.8e-06 54.7 35 71.4
DCAR_021571 Daucus carota HOM05D000462 ORTHO05D002607 4.8e-06 54.7 35 68.6
Prupe.3G287800 Prunus persica HOM05D000462 ORTHO05D002607 4.8e-06 54.7 38 63.2
ClCG01G013200 Citrullus lanatus HOM05D000462 ORTHO05D002607 6.3e-06 54.3 34 70.6
CsaV3_1G008560 Cucumis sativus L. HOM05D000462 ORTHO05D002607 6.3e-06 54.3 34 70.6
ECA246G1454 Erigeron canadensis HOM05D000462 ORTHO05D002607 6.3e-06 54.3 67 47.8
HanXRQChr02g0036001 Helianthus annuus HOM05D000462 ORTHO05D002607 6.3e-06 54.3 34 70.6
MD14G1178800 Malus domestica HOM05D000462 ORTHO05D002607 6.3e-06 54.3 41 70.7
Mapoly0083s0074 Marchantia polymorpha HOM05D000462 ORTHO05D002607 6.3e-06 54.3 33 72.7
Sabra15G0102500 Salix brachista HOM05D000462 ORTHO05D002607 6.3e-06 54.3 30 80.0
Zm00001eb042970 Zea mays HOM05D000462 ORTHO05D002607 6.3e-06 54.3 35 65.7
FAN05G5429 Fragaria x ananassa HOM05D000462 ORTHO05D002607 8.2e-06 53.9 35 65.7
FAN08G3107 Fragaria x ananassa HOM05D000462 ORTHO05D002607 8.2e-06 53.9 30 80.0
MD09G1029600 Malus domestica HOM05D000462 ORTHO05D002607 8.2e-06 53.9 35 60.0


User provided reference genes

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