Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn029s41585 Nelumbo nucifera HOM05D001966 ORTHO05D010449 3.2e-29 131.0 60 100.0
Nn064s42222 Nelumbo nucifera HOM05D001966 ORTHO05D010449 3.2e-29 131.0 60 100.0
Nn212s45202 Nelumbo nucifera HOM05D001966 ORTHO05D010449 3.2e-29 131.0 60 100.0
Nn264s45946 Nelumbo nucifera HOM05D001966 ORTHO05D010449 3.2e-29 131.0 60 100.0
Nn8g40933 Nelumbo nucifera HOM05D001966 ORTHO05D010449 2.0e-28 128.3 60 98.3
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 4.6e-28 127.1 60 98.3
BcaNung01515 Brassica carinata HOM05D001966 ORTHO05D010449 4.6e-28 127.1 60 98.3
BraSC138t45527Z Brassica rapa HOM05D001966 ORTHO05D010449 4.6e-28 127.1 60 98.3
BraSC25t45919Z Brassica rapa HOM05D001966 ORTHO05D010449 4.6e-28 127.1 60 98.3
BraSC59t46542Z Brassica rapa HOM05D001966 ORTHO05D010449 4.6e-28 127.1 60 98.3
Cpa.g.c43052.2 Carica papaya HOM05D001966 ORTHO05D010449 4.6e-28 127.1 60 98.3
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 5.9e-28 126.7 59 98.3
Gohir.A05G323716 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.3e-27 125.6 60 96.7
Gohir.A09G102700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.3e-27 125.6 60 96.7
arahy.Tifrunner.gnm1.ann1.818UAU Arachis hypogaea HOM05D001966 ORTHO05D010449 3.9e-27 124.0 60 96.7
Potri.011G074100 Populus trichocarpa HOM05D001966 ORTHO05D010449 5.0e-27 123.6 60 95.0
Cpa.g.c38922 Carica papaya HOM05D001966 ORTHO05D010449 6.6e-27 123.2 60 95.0
Ca_03784_v3 Cicer arietinum L. HOM05D001966 ORTHO05D010449 1.5e-26 122.1 59 94.9
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 3.3e-26 120.9 57 96.5
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 3.3e-26 120.9 60 95.0
Hma1.2p1_0642F.1_g194360 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 7.3e-26 119.8 60 91.7
FAN06G1313 Fragaria x ananassa HOM05D001966 ORTHO05D010449 1.6e-25 118.6 60 93.3
Lj3g0016717 Lotus japonicus HOM05D001966 ORTHO05D010449 4.7e-25 117.1 60 93.3
Gohir.A10G065960 Gossypium hirsutum HOM05D001966 ORTHO05D010449 8.0e-25 116.3 60 91.7
Gohir.A09G034500 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.0e-24 115.9 58 93.1
Phvul.006G154100 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 1.4e-24 115.5 60 91.7
EL10Ac8g19703 Beta vulgaris HOM05D001966 ORTHO05D010449 3.1e-24 114.4 60 90.0
Gohir.D12G084201 Gossypium hirsutum HOM05D001966 ORTHO05D010449 4.0e-24 114.0 60 90.0
arahy.Tifrunner.gnm1.ann1.11UFCR Arachis hypogaea HOM05D001966 ORTHO05D010449 9.8e-23 109.4 59 86.4
Gorai.008G094200 Gossypium raimondii HOM05D001966 ORTHO05D010449 1.3e-22 109.0 60 85.0
Gohir.A06G105700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.4e-21 105.5 60 81.7
Gohir.A02G069600 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.9e-21 105.1 59 84.7
SHI36541 Sapria himalayana HOM05D001966 ORTHO05D010449 1.2e-20 102.4 47 95.7
Glyma.08G269900 Glycine max HOM05D001966 ORTHO05D010449 2.7e-20 101.3 60 80.0
Hma1.2p1_0236F.1_g099130 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 2.7e-20 101.3 49 91.8
Gohir.D02G173601 Gossypium hirsutum HOM05D001966 ORTHO05D010449 6.0e-20 100.1 58 82.8
Gorai.006G234500 Gossypium raimondii HOM05D001966 ORTHO05D010449 1.9e-18 95.1 51 86.3
Phvul.002G203800 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 4.7e-17 90.5 43 95.3
arahy.Tifrunner.gnm1.ann1.A6TYH4 Arachis hypogaea HOM05D001966 ORTHO05D010449 1.2e-15 85.9 38 97.4
arahy.Tifrunner.gnm1.ann1.EPN6WV Arachis hypogaea HOM05D001966 ORTHO05D010449 1.2e-15 85.9 38 97.4
Gohir.D09G072950 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.0e-15 85.1 41 90.2
TPR.G18587 Trifolium pratense HOM05D001966 ORTHO05D010449 3.4e-15 84.3 41 90.2
A02p28440 Brassica napus HOM05D001966 ORTHO05D010449 6.4e-14 80.1 56 64.3
BraA02t07879Z Brassica rapa HOM05D001966 ORTHO05D010449 6.4e-14 80.1 56 64.3
Gorai.007G250500 Gossypium raimondii HOM05D001966 ORTHO05D010449 1.9e-13 78.6 44 79.5
Gohir.D11G237220 Gossypium hirsutum HOM05D001966 ORTHO05D010449 9.2e-13 76.3 41 82.9
arahy.Tifrunner.gnm1.ann1.PU3CYV Arachis hypogaea HOM05D001966 ORTHO05D010449 6.0e-12 73.6 54 63.0
LjContig00319g0014927 Lotus japonicus HOM05D001966 ORTHO05D007227 6.0e-12 73.6 38 89.5
SHI23682 Sapria himalayana HOM05D001966 ORTHO05D010449 2.3e-11 71.6 31 96.8
Aqoxy4G03063 Aquilegia oxysepala HOM05D000710 ORTHO05D010449 3.0e-11 71.2 39 82.1
Psat0s1116g0080 Pisum sativum HOM05D004182 ORTHO05D007321 5.1e-11 70.5 32 96.9
Psat4g168320 Pisum sativum HOM05D004182 ORTHO05D007321 3.3e-10 67.8 32 90.6
Psat5g167880 Pisum sativum HOM05D000009 ORTHO05D000008 3.3e-10 67.8 32 93.8
Lj4g0021959 Lotus japonicus HOM05D008259 ORTHO05D010449 7.3e-10 66.6 47 68.1
Gohir.D02G151976 Gossypium hirsutum HOM05D001966 ORTHO05D010449 9.5e-10 66.2 37 86.5
BraSC143t45650Z Brassica rapa HOM05D001966 ORTHO05D010449 1.2e-09 65.9 33 87.9
BraSC58t46454Z Brassica rapa HOM05D001966 ORTHO05D010449 2.1e-09 65.1 35 80.0
EL10As15g24132 Beta vulgaris HOM05D008259 ORTHO05D010449 1.2e-07 59.3 25 100.0
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.2e-07 59.3 25 100.0
FAN26G2239 Fragaria x ananassa HOM05D004182 ORTHO05D010449 1.2e-07 59.3 25 100.0
Sopen02g009080 Solanum pennellii HOM05D004182 ORTHO05D007321 1.2e-07 59.3 25 100.0
DCAR_029424 Daucus carota HOM05D001966 ORTHO05D010449 1.5e-07 58.9 38 68.4


User provided reference genes

Program Settings