Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn107s43247 Nelumbo nucifera HOM05D000741 ORTHO05D000506 2.8e-51 204.9 99 100.0
Nn235s45565 Nelumbo nucifera HOM05D000741 ORTHO05D000506 2.8e-51 204.9 99 100.0
Nn028s41569 Nelumbo nucifera HOM05D000741 ORTHO05D000506 7.3e-23 110.5 51 100.0
Nn028s41573 Nelumbo nucifera HOM05D000741 ORTHO05D000506 7.3e-23 110.5 51 100.0
Nn107s43244 Nelumbo nucifera HOM05D000741 ORTHO05D000506 7.3e-23 110.5 51 100.0
Nn107s43248 Nelumbo nucifera HOM05D000741 ORTHO05D000506 7.3e-23 110.5 51 100.0
Nn8g39774 Nelumbo nucifera HOM05D000741 ORTHO05D000506 7.3e-23 110.5 51 100.0
Nn8g40598 Nelumbo nucifera HOM05D000741 ORTHO05D000506 7.3e-23 110.5 51 100.0
Nn8g41292 Nelumbo nucifera HOM05D000741 ORTHO05D000506 7.3e-23 110.5 51 100.0
Nn8g41296 Nelumbo nucifera HOM05D000741 ORTHO05D000506 7.3e-23 110.5 51 100.0
Nn8g41339 Nelumbo nucifera HOM05D000741 ORTHO05D000506 7.3e-23 110.5 51 100.0
Nn8g39790 Nelumbo nucifera HOM05D000741 ORTHO05D000506 1.1e-10 70.1 69 55.1
Cc06_g15410 Coffea canephora HOM05D000741 ORTHO05D000506 3.2e-10 68.6 46 69.6
MBI14_g30671_MAGBIO Magnolia biondii HOM05D000741 ORTHO05D000506 3.2e-10 68.6 67 56.7
Lalb_Chr07g0179681 Lupinus albus HOM05D000741 ORTHO05D000506 4.1e-10 68.2 75 48.0
Nitab4.5_0001094g0010 Nicotiana tabacum HOM05D000741 ORTHO05D000506 5.4e-10 67.8 64 50.0
Cc06_g15420 Coffea canephora HOM05D000741 ORTHO05D000506 9.2e-10 67.0 46 65.2
Nitab4.5_0000416g0240 Nicotiana tabacum HOM05D000741 ORTHO05D000506 9.2e-10 67.0 64 48.4
Cc06_g15430 Coffea canephora HOM05D000741 ORTHO05D000506 1.2e-09 66.6 46 67.4
Thhalv10025464m.g Eutrema salsugineum HOM05D000741 ORTHO05D000506 1.6e-09 66.2 66 54.5
Medtr3g110320 Medicago truncatula HOM05D000741 ORTHO05D000506 1.6e-09 66.2 71 50.7
Potri.006G188400 Populus trichocarpa HOM05D000741 ORTHO05D000506 1.6e-09 66.2 66 57.6
AUR62033303 Chenopodium quinoa HOM05D000741 ORTHO05D000506 2.1e-09 65.9 62 48.4
GSVIVG01001068001 Vitis vinifera HOM05D000741 ORTHO05D000506 2.7e-09 65.5 72 50.0
Medtr4g116920 Medicago truncatula HOM05D000741 ORTHO05D000506 4.6e-09 64.7 68 52.9
Nitab4.5_0000416g0250 Nicotiana tabacum HOM05D000741 ORTHO05D000506 4.6e-09 64.7 64 46.9
Ca_15576_v3 Cicer arietinum L. HOM05D000741 ORTHO05D000506 6.0e-09 64.3 57 57.9
Ciclev10008669m.g Citrus clementina HOM05D000741 ORTHO05D000506 6.0e-09 64.3 60 56.7
BcaC09g51366 Brassica carinata HOM05D000741 ORTHO05D000506 7.8e-09 63.9 62 58.1
MBI07_g04036_MAGBIO Magnolia biondii HOM05D000741 ORTHO05D000506 7.8e-09 63.9 66 53.0
Nitab4.5_0000416g0220 Nicotiana tabacum HOM05D000741 ORTHO05D000506 7.8e-09 63.9 69 46.4
EL10Ac8g18360 Beta vulgaris HOM05D000741 ORTHO05D000506 1.0e-08 63.5 54 53.7
A01p11700 Brassica napus HOM05D000741 ORTHO05D000506 1.0e-08 63.5 62 58.1
A08p14500 Brassica napus HOM05D000741 ORTHO05D000506 1.0e-08 63.5 63 55.6
C01p13850 Brassica napus HOM05D000741 ORTHO05D000506 1.0e-08 63.5 62 58.1
C01p13870 Brassica napus HOM05D000741 ORTHO05D000506 1.0e-08 63.5 62 58.1
BolC1t01355H Brassica oleracea HOM05D000741 ORTHO05D000506 1.0e-08 63.5 62 58.1
BraA01t01112Z Brassica rapa HOM05D000741 ORTHO05D000506 1.0e-08 63.5 62 58.1
BraA08t33438Z Brassica rapa HOM05D000741 ORTHO05D000506 1.0e-08 63.5 63 55.6
Carub.0007s2140 Capsella rubella HOM05D000741 ORTHO05D000506 1.0e-08 63.5 65 50.8
CiPaw.16G115800 Carya illinoinensis HOM05D000741 ORTHO05D000506 1.0e-08 63.5 62 56.5
GSVIVG01001074001 Vitis vinifera HOM05D000741 ORTHO05D000506 1.0e-08 63.5 72 48.6
ClCG06G012160 Citrullus lanatus HOM05D000741 ORTHO05D000506 1.3e-08 63.2 64 57.8
Peaxi162Scf00347g00420 Petunia axillaris HOM05D000741 ORTHO05D000506 1.3e-08 63.2 65 47.7
Sp7g18320 Schrenkiella parvula HOM05D000741 ORTHO05D000506 1.3e-08 63.2 75 53.3
THA.LOC104812912 Tarenaya hassleriana HOM05D000741 ORTHO05D000506 1.3e-08 63.2 50 60.0
AT4G19810 Arabidopsis thaliana HOM05D000741 ORTHO05D000506 1.7e-08 62.8 66 53.0
arahy.Tifrunner.gnm1.ann1.A977GK Arachis hypogaea HOM05D000741 ORTHO05D000506 1.7e-08 62.8 62 54.8
arahy.Tifrunner.gnm1.ann1.LHA0CF Arachis hypogaea HOM05D000741 ORTHO05D000506 1.7e-08 62.8 62 54.8
Haze_19248 Corylus avellana HOM05D000741 ORTHO05D000506 1.7e-08 62.8 61 54.1
Eucgr.C00395 Eucalyptus grandis HOM05D000741 ORTHO05D000506 1.7e-08 62.8 61 55.7
Medtr3g110280 Medicago truncatula HOM05D000741 ORTHO05D000506 1.7e-08 62.8 69 50.7
BcaB03g11642 Brassica carinata HOM05D000741 ORTHO05D000506 2.3e-08 62.4 60 53.3
BcaNung01749 Brassica carinata HOM05D000741 ORTHO05D000506 2.3e-08 62.4 62 56.5
BolC1t01353H Brassica oleracea HOM05D000741 ORTHO05D000506 2.3e-08 62.4 68 54.4
Sabra06G0144000 Salix brachista HOM05D000741 ORTHO05D000506 3.0e-08 62.0 60 55.0
Sabra06G0144100 Salix brachista HOM05D000741 ORTHO05D000506 3.0e-08 62.0 60 55.0
Sabra06G0144900 Salix brachista HOM05D000741 ORTHO05D000506 3.0e-08 62.0 60 55.0
TPR.G15091 Trifolium pratense HOM05D000741 ORTHO05D000506 3.0e-08 62.0 54 53.7
Carub.0007s2139 Capsella rubella HOM05D000741 ORTHO05D000506 3.9e-08 61.6 67 55.2
Gohir.A07G025400 Gossypium hirsutum HOM05D000741 ORTHO05D000506 3.9e-08 61.6 67 55.2
Gohir.D07G029100 Gossypium hirsutum HOM05D000741 ORTHO05D000506 3.9e-08 61.6 67 55.2
Gorai.001G030400 Gossypium raimondii HOM05D000741 ORTHO05D000506 3.9e-08 61.6 67 55.2
RcHm_v2.0_Chr2g0086161 Rosa chinensis HOM05D000741 ORTHO05D000506 3.9e-08 61.6 70 48.6
TPR.G33055 Trifolium pratense HOM05D000741 ORTHO05D000506 3.9e-08 61.6 65 49.2
AL7G34280 Arabidopsis lyrata HOM05D000741 ORTHO05D000506 5.1e-08 61.2 64 50.0
MSTRG.6101 Avicennia marina HOM05D000741 ORTHO05D000506 5.1e-08 61.2 42 64.3
AUR62021383 Chenopodium quinoa HOM05D000741 ORTHO05D000506 5.1e-08 61.2 64 45.3
Nitab4.5_0003041g0050 Nicotiana tabacum HOM05D000741 ORTHO05D000506 5.1e-08 61.2 64 48.4
Solyc07g005100.4 Solanum lycopersicum HOM05D000741 ORTHO05D000506 5.1e-08 61.2 47 57.4
TWI34G0004 Tripterygium wilfordii HOM05D000741 ORTHO05D000506 5.1e-08 61.2 61 54.1
GSVIVG01003718001 Vitis vinifera HOM05D000741 ORTHO05D000506 5.1e-08 61.2 72 47.2
CiPaw.15G173000 Carya illinoinensis HOM05D000741 ORTHO05D000506 6.6e-08 60.8 55 60.0
Duzib168G0820 Durio zibethinus HOM05D000741 ORTHO05D000506 6.6e-08 60.8 65 53.8
Eucgr.C00386 Eucalyptus grandis HOM05D000741 ORTHO05D000506 6.6e-08 60.8 61 54.1
Gohir.A07G025360 Gossypium hirsutum HOM05D000741 ORTHO05D000506 6.6e-08 60.8 66 53.0
Rhsim01G0042600 Rhododendron simsii HOM05D000741 ORTHO05D000506 6.6e-08 60.8 64 56.2
Thecc.09G035100 Theobroma cacao HOM05D000741 ORTHO05D000506 6.6e-08 60.8 68 52.9
Gorai.001G030300 Gossypium raimondii HOM05D000741 ORTHO05D000506 8.6e-08 60.5 64 51.6
TWI32G1023 Tripterygium wilfordii HOM05D000741 ORTHO05D000506 8.6e-08 60.5 63 50.8
GSVIVG01001064001 Vitis vinifera HOM05D000741 ORTHO05D000506 8.6e-08 60.5 62 51.6
CARHR226580 Cardamine hirsuta HOM05D000741 ORTHO05D000506 1.1e-07 60.1 50 58.0
CiPaw.15G172800 Carya illinoinensis HOM05D000741 ORTHO05D000506 1.1e-07 60.1 45 62.2
MD02G1011100 Malus domestica HOM05D000741 ORTHO05D000506 1.1e-07 60.1 60 50.0
vmacro13047 Vaccinium macrocarpon HOM05D000741 ORTHO05D000506 1.1e-07 60.1 64 53.1
vmacro23232 Vaccinium macrocarpon HOM05D000741 ORTHO05D000506 1.1e-07 60.1 64 53.1
Glyma.15G206800 Glycine max HOM05D000741 ORTHO05D000506 1.5e-07 59.7 71 46.5
Lalb_Chr13g0301101 Lupinus albus HOM05D000741 ORTHO05D000506 1.5e-07 59.7 61 49.2
MSTRG.6100 Avicennia marina HOM05D000741 ORTHO05D000506 1.9e-07 59.3 42 61.9
Psat5g020240 Pisum sativum HOM05D000741 ORTHO05D000506 1.9e-07 59.3 60 53.3
MELO3C010248.2 Cucumis melo HOM05D000741 ORTHO05D000506 2.5e-07 58.9 63 52.4
Eucgr.C00393 Eucalyptus grandis HOM05D000741 ORTHO05D000506 2.5e-07 58.9 61 52.5
Manes.14G111400 Manihot esculenta HOM05D000741 ORTHO05D000506 2.5e-07 58.9 66 50.0
QL02p092397 Quercus lobata HOM05D000741 ORTHO05D000506 2.5e-07 58.9 60 51.7
TAR626G0738 Trochodendron aralioides HOM05D000741 ORTHO05D000506 2.5e-07 58.9 51 58.8
AUR62033300 Chenopodium quinoa HOM05D000741 ORTHO05D000506 3.3e-07 58.5 64 48.4
DCAR_014821 Daucus carota HOM05D000741 ORTHO05D000506 3.3e-07 58.5 52 57.7
DCAR_014822 Daucus carota HOM05D000741 ORTHO05D000506 3.3e-07 58.5 58 53.4
Rhsim01G0046800 Rhododendron simsii HOM05D000741 ORTHO05D000506 3.3e-07 58.5 64 54.7
Aa31LG7G8170 Aethionema arabicum HOM05D000741 ORTHO05D000506 4.3e-07 58.2 62 48.4
BcaC01g00634 Brassica carinata HOM05D000741 ORTHO05D000506 4.3e-07 58.2 50 56.0
Haze_19251 Corylus avellana HOM05D000741 ORTHO05D000506 4.3e-07 58.2 61 50.8
Lj4g0024525 Lotus japonicus HOM05D000741 ORTHO05D000506 4.3e-07 58.2 66 47.0
QL02p077792 Quercus lobata HOM05D000741 ORTHO05D000506 4.3e-07 58.2 62 50.0
Rhsim01G0042300 Rhododendron simsii HOM05D000741 ORTHO05D000506 4.3e-07 58.2 63 50.8
Aa31LG6G2300 Aethionema arabicum HOM05D000741 ORTHO05D000506 5.6e-07 57.8 65 49.2
arahy.Tifrunner.gnm1.ann1.FIY695 Arachis hypogaea HOM05D000741 ORTHO05D000506 5.6e-07 57.8 65 49.2
C03p82360 Brassica napus HOM05D000741 ORTHO05D000506 5.6e-07 57.8 50 54.0
BolC3t20516H Brassica oleracea HOM05D000741 ORTHO05D000506 5.6e-07 57.8 50 54.0
arahy.Tifrunner.gnm1.ann1.B9R3MB Arachis hypogaea HOM05D000741 ORTHO05D000506 7.3e-07 57.4 57 49.1
CAN.G11.33 Capsicum annuum HOM05D000741 ORTHO05D000506 7.3e-07 57.4 47 51.1
SalBow1G2968 Salvia bowleyana HOM05D000741 ORTHO05D000506 7.3e-07 57.4 60 48.3
Sc14g0000040 Simmondsia chinensis HOM05D000741 ORTHO05D000506 7.3e-07 57.4 57 52.6
QL02p092386 Quercus lobata HOM05D000741 ORTHO05D000506 9.5e-07 57.0 60 51.7
QL02p092418 Quercus lobata HOM05D000741 ORTHO05D000506 9.5e-07 57.0 60 50.0
CSS0039683 Camellia sinensis var. sinensis HOM05D000741 ORTHO05D000506 1.2e-06 56.6 61 49.2
CSS0047193 Camellia sinensis var. sinensis HOM05D000741 ORTHO05D000506 1.2e-06 56.6 61 49.2
AUR62021382 Chenopodium quinoa HOM05D000741 ORTHO05D000506 1.2e-06 56.6 67 49.3
AUR62033299 Chenopodium quinoa HOM05D000741 ORTHO05D000506 1.2e-06 56.6 64 46.9
Lj9A712G57 Lonicera japonica HOM05D000741 ORTHO05D000506 1.2e-06 56.6 68 48.5
Prupe.7G258500 Prunus persica HOM05D000741 ORTHO05D000506 1.2e-06 56.6 60 50.0
Sabra06G0144200 Salix brachista HOM05D000741 ORTHO05D000506 1.2e-06 56.6 60 50.0
MD15G1156100 Malus domestica HOM05D000741 ORTHO05D000506 1.6e-06 56.2 74 41.9
Potri.006G188300 Populus trichocarpa HOM05D000741 ORTHO05D000506 1.6e-06 56.2 47 57.4
Phvul.003G158500 Phaseolus vulgaris HOM05D000741 ORTHO05D000506 2.1e-06 55.8 61 50.8
Prupe.7G259000 Prunus persica HOM05D000741 ORTHO05D000506 2.1e-06 55.8 60 48.3
Sabra06G0145000 Salix brachista HOM05D000741 ORTHO05D000506 2.1e-06 55.8 47 57.4
CSS0043648 Camellia sinensis var. sinensis HOM05D000741 ORTHO05D000506 2.8e-06 55.5 59 47.5
CSS0048425 Camellia sinensis var. sinensis HOM05D000741 ORTHO05D000506 2.8e-06 55.5 59 47.5
AUR62033302 Chenopodium quinoa HOM05D000741 ORTHO05D000506 2.8e-06 55.5 68 47.1
CANSAT11G0781 Cannabis sativa HOM05D000741 ORTHO05D000506 3.6e-06 55.1 65 47.7
AUR62021381 Chenopodium quinoa HOM05D000741 ORTHO05D000506 3.6e-06 55.1 66 50.0
QL02p092392 Quercus lobata HOM05D000741 ORTHO05D000506 3.6e-06 55.1 60 48.3
FvH4_1g01340 Fragaria vesca HOM05D000741 ORTHO05D000506 4.7e-06 54.7 70 47.1
FvH4_1g01364 Fragaria vesca HOM05D000741 ORTHO05D000506 4.7e-06 54.7 70 47.1
Lj6g0000028 Lotus japonicus HOM05D000741 ORTHO05D000506 4.7e-06 54.7 62 51.6
Hund21606 Selenicereus undatus HOM05D000741 ORTHO05D000506 4.7e-06 54.7 41 61.0
Atru.chr7.56 Acer truncatum HOM05D000741 ORTHO05D000506 6.2e-06 54.3 63 49.2
MSTRG.22032 Avicennia marina HOM05D000741 ORTHO05D000506 6.2e-06 54.3 64 45.3
COL.COLO4_18759 Corchorus olitorius HOM05D000741 ORTHO05D000506 6.2e-06 54.3 59 49.2
Manes.14G111300 Manihot esculenta HOM05D000741 ORTHO05D000506 6.2e-06 54.3 50 56.0
COL.COLO4_18760 Corchorus olitorius HOM05D000741 ORTHO05D000506 8.1e-06 53.9 76 42.1
FAN26G1870 Fragaria x ananassa HOM05D000741 ORTHO05D000506 8.1e-06 53.9 70 47.1


User provided reference genes

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